RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 OSMP13725 252 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 SYN1P17600 705 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 XBP1P17861 261 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 ITGB5P18084 799 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 PTGS1P23219 599 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 RFC2P35250 354 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 GRK3P35626 688 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 TSPAN7P41732 249 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 SP2Q02086 613 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 FPGSQ05932 587 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 ST3GAL1Q11201 340 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 PPIGQ13427 754 aaKnown RBP eCLIP6.44□□□□□ -1.381e-6■□□□□ 8.7
TMEM39A-212ENST00000497993 LY6KQ17RY6 165 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 TRIM71Q2Q1W2 868 aaKnown RBP6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 HSDL1Q3SXM5 330 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 GALNT17Q6IS24 598 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 MOXD1Q6UVY6 613 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 CHCHD4Q8N4Q1 142 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 CCDC148Q8NFR7 591 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 SMARCC2Q8TAQ2 1214 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 CCDC12Q8WUD4 166 aaPredicted RBP6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 AFG1LQ8WV93 481 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 LRFN3Q9BTN0 628 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 WNT8AQ9H1J5 351 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 ATP6V0A4Q9HBG4 840 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 UBN1Q9NPG3 1134 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 GPRC5CQ9NQ84 441 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 KMT5AQ9NQR1 393 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 USP36Q9P275 1121 aaKnown RBP6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 IFT80Q9P2H3 777 aaPredicted RBP6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 CEP83Q9Y592 693 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 PCDHGB2Q9Y5G2 931 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 CYP46A1Q9Y6A2 500 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 IGKV6D-21A0A0A0MT36 114 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 MEIS1O00470 390 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 DDX3XO00571 662 aaKnown RBP eCLIP6.43□□□□□ -1.382e-10■■■■□ 21.8
TMEM39A-212ENST00000497993 PFKFB2O60825 505 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 FGF18O76093 207 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 GGPS1O95749 300 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 CXCL10P02778 98 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 ALDH2P05091 517 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 CYP17A1P05093 508 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 RPLP2P05387 115 aaKnown RBP6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 THP07101 528 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 FUT4P22083 530 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 TPP2P29144 1249 aaPredicted RBP6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 GNA11P29992 359 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 SEPHS1P49903 392 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 ADCY7P51828 1080 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 NAPAP54920 295 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 IKZF1Q13422 519 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 ANKRD1Q15327 319 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 CCNG2Q16589 344 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 CEP55Q53EZ4 464 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 PSRC1Q6PGN9 363 aaPredicted RBP6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 ZNF574Q6ZN55 896 aaPredicted RBP6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 SEPT14Q6ZU15 432 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 NLRX1Q86UT6 975 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 TSPYL5Q86VY4 417 aaPredicted RBP6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 KSR1Q8IVT5 923 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 CACNA2D3Q8IZS8 1091 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 AFAP1L1Q8TED9 768 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 HERVK_113Q902F9 699 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 BADQ92934 168 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 RAX2Q96IS3 184 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 MBOAT7Q96N66 472 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 CGRRF1Q99675 332 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 GPR20Q99678 358 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 LBHD1Q9BQE6 289 aaPredicted RBP6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 MXRA8Q9BRK3 442 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 ANO3Q9BYT9 981 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 C22orf23Q9BZE7 217 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 QRSL1Q9H0R6 528 aaKnown RBP6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 MS4A5Q9H3V2 200 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 HIPK3Q9H422 1215 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 ATP13A1Q9HD20 1204 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 PNPLA8Q9NP80 782 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 IL23AQ9NPF7 189 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 ITM2CQ9NQX7 267 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 ACSS2Q9NR19 701 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 NKIRAS2Q9NYR9 191 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 TUBD1Q9UJT1 453 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 CBLCQ9ULV8 474 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 PCDHA6Q9UN73 950 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 STXBP5LQ9Y2K9 1186 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 TRIP11Q15643 1979 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 PRUNE2Q8WUY3 3088 aa6.43□□□□□ -1.38
TMEM39A-212ENST00000497993 MBLAC1A4D2B0 266 aaPredicted RBP6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 H0Y8X5 98 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 AURKAO14965 403 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 SIGLEC6O43699 453 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 DEXIO95424 95 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 CTDNEP1O95476 244 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 LGALS2P05162 132 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 GSNP06396 782 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 CD3EP07766 207 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 KRT20P35900 424 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 NOP2P46087 812 aaKnown RBP6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 KIF11P52732 1056 aa6.42□□□□□ -1.38
TMEM39A-212ENST00000497993 EPHB4P54760 987 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms