RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 ZSWIM1Q9BR11 485 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 ULBP1Q9BZM6 244 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 C8orf33Q9H7E9 229 aaPredicted RBP12.35□□□□□ -0.43
MRPL55-234ENST00000497758 FAM207AQ9NSI2 230 aaPredicted RBP12.35□□□□□ -0.43
MRPL55-234ENST00000497758 DUS2Q9NX74 493 aaKnown RBP12.35□□□□□ -0.43
MRPL55-234ENST00000497758 CFAP97Q9P2B7 532 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 FHOD1Q9Y613 1164 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 USP3Q9Y6I4 520 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 ZNF638Q14966 1978 aaKnown RBP12.35□□□□□ -0.43
MRPL55-234ENST00000497758 F5P12259 2224 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 DENND4CQ5VZ89 1909 aa12.35□□□□□ -0.43
MRPL55-234ENST00000497758 PATJQ8NI35 1801 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 KANSL1LA0AUZ9 987 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 SLC9A3R1O14745 358 aaPredicted RBP12.34□□□□□ -0.43
MRPL55-234ENST00000497758 CAVIN2O95810 425 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 RARGP13631 454 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 ATP1A3P13637 1013 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 LCP1P13796 627 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 TCF3P15923 654 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 AOC1P19801 751 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 CD72P21854 359 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 AVPR2P30518 371 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 ATP5C1P36542 298 aaKnown RBP12.34□□□□□ -0.43
MRPL55-234ENST00000497758 PGFP49763 221 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 RGS7P49802 495 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 VCPP55072 806 aaKnown RBP12.34□□□□□ -0.43
MRPL55-234ENST00000497758 TNK2Q07912 1038 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 DRAP1Q14919 205 aaPredicted RBP12.34□□□□□ -0.43
MRPL55-234ENST00000497758 SYCP1Q15431 976 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 PKDCCQ504Y2 493 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 CWF19L1Q69YN2 538 aaKnown RBP12.34□□□□□ -0.43
MRPL55-234ENST00000497758 TRIM68Q6AZZ1 485 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 C1orf228Q6PIY5 440 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 RSRC2Q7L4I2 434 aaKnown RBP12.34□□□□□ -0.43
MRPL55-234ENST00000497758 CPA6Q8N4T0 437 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 SLC35F5Q8WV83 523 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 OSCP1Q8WVF1 389 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 ZNF606Q8WXB4 792 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 KCTD13Q8WZ19 329 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 ATP2A3Q93084 1043 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 FAM83CQ9BQN1 747 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 FUCA2Q9BTY2 467 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 FOXQ1Q9C009 403 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 EBF3Q9H4W6 596 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 NMUR1Q9HB89 426 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 PLCB1Q9NQ66 1216 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 CYLDQ9NQC7 956 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 ST7Q9NRC1 585 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 GTSE1Q9NYZ3 720 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 CLIC5Q9NZA1 410 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 DNMT3LQ9UJW3 386 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 AJAP1Q9UKB5 411 aaPredicted RBP12.34□□□□□ -0.43
MRPL55-234ENST00000497758 SH3BP1Q9Y3L3 701 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 SIT1Q9Y3P8 196 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 WNT6Q9Y6F9 365 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 WDFY4Q6ZS81 3184 aa12.34□□□□□ -0.43
MRPL55-234ENST00000497758 ANAPC1Q9H1A4 1944 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 LRRC10BA6NIK2 292 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 FAM170BA6NMN3 283 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 FOXN3O00409 490 aaPredicted RBP12.33□□□□□ -0.44
MRPL55-234ENST00000497758 PNMA6AP0CW24 399 aaPredicted RBP12.33□□□□□ -0.44
MRPL55-234ENST00000497758 IRF1P10914 325 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 ARSAP15289 507 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 COL9A1P20849 921 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 KRT9P35527 623 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 MLLT6P55198 1093 aaPredicted RBP12.33□□□□□ -0.44
MRPL55-234ENST00000497758 YWHAGP61981 247 aaKnown RBP eCLIP12.33□□□□□ -0.44
MRPL55-234ENST00000497758 AMPD2Q01433 879 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 RUNX3Q13761 415 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 MEA1Q16626 185 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 FILIP1LQ4L180 1135 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 BTBD8Q5XKL5 378 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 PMF1Q6P1K2 205 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 DENND1BQ6P3S1 775 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 KLHDC10Q6PID8 442 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 SCD5Q86SK9 330 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 RALGPS2Q86X27 583 aaPredicted RBP12.33□□□□□ -0.44
MRPL55-234ENST00000497758 FAM71AQ8IYT1 594 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 KIAA1958Q8N8K9 716 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 TMEM105Q8N8V8 129 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 PJA1Q8NG27 643 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 NEK11Q8NG66 645 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 RIN3Q8TB24 985 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 FAM3CQ92520 227 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 GOLGA1Q92805 767 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 HSFY1Q96LI6 401 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 NELL2Q99435 816 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 DDX23Q9BUQ8 820 aaKnown RBP12.33□□□□□ -0.44
MRPL55-234ENST00000497758 STK33Q9BYT3 514 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 HSD3B7Q9H2F3 369 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 PDCL3Q9H2J4 239 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 LTB4R2Q9NPC1 389 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 ACP6Q9NPH0 428 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 CNGB3Q9NQW8 809 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.33□□□□□ -0.44
MRPL55-234ENST00000497758 OSER1Q9NX31 292 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 NDRG2Q9UN36 371 aaKnown RBP12.33□□□□□ -0.44
MRPL55-234ENST00000497758 DAAM1Q9Y4D1 1078 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 CEP83Q9Y592 693 aa12.33□□□□□ -0.44
MRPL55-234ENST00000497758 MUC6Q6W4X9 2439 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms