RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 SMARCD2Q92925 531 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 CCDC136Q96JN2 1154 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 FOXP3Q9BZS1 431 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 RWDD1Q9H446 243 aaPredicted RBP8.37□□□□□ -1.07
VPS45-210ENST00000497638 NXF3Q9H4D5 531 aaKnown RBP8.37□□□□□ -1.07
VPS45-210ENST00000497638 DHX33Q9H6R0 707 aaKnown RBP8.37□□□□□ -1.07
VPS45-210ENST00000497638 C8orf33Q9H7E9 229 aaPredicted RBP8.37□□□□□ -1.07
VPS45-210ENST00000497638 VPS45Q9NRW7 570 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 KBTBD4Q9NVX7 518 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 AKAP13Q12802 2813 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 ARHGEF37A1IGU5 675 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 WDR27A2RRH5 827 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 ZNF263O14978 683 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 ZBTB43O43298 467 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 DKC1O60832 514 aaKnown RBP eCLIP8.36□□□□□ -1.07
VPS45-210ENST00000497638 RPP40O75818 363 aaKnown RBP8.36□□□□□ -1.07
VPS45-210ENST00000497638 LRG1P02750 347 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 PDIA4P13667 645 aaKnown RBP8.36□□□□□ -1.07
VPS45-210ENST00000497638 OR1D2P34982 312 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 RCAN1P53805 252 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 PCBP3P57721 371 aaKnown RBP8.36□□□□□ -1.07
VPS45-210ENST00000497638 PTENP60484 403 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 CCDC6Q16204 474 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 TTC22Q5TAA0 569 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 DAB2IPQ5VWQ8 1189 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 PLA2G4FQ68DD2 849 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 VITQ6UXI7 678 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 Q6ZS52 159 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 FERMT3Q86UX7 667 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 SYNPOQ8N3V7 929 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 CSGALNACT1Q8TDX6 532 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 HASPINQ8TF76 798 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 RABGGTAQ92696 567 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 TMEM143Q96AN5 459 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 EDEM2Q9BV94 578 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 HDAC8Q9BY41 377 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 LRRC2Q9BYS8 371 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.36□□□□□ -1.07
VPS45-210ENST00000497638 MTRRQ9UBK8 725 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 TCFL5Q9UL49 500 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 PCDHB14Q9Y5E9 798 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 ITPR1Q14643 2758 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 CACNA1EQ15878 2313 aa8.36□□□□□ -1.07
VPS45-210ENST00000497638 PDCD11Q14690 1871 aaKnown RBP8.36□□□□□ -1.07
VPS45-210ENST00000497638 LOC400499M0QZD8 3231 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 ACACAQ13085 2346 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 CASTOR2A6NHX0 329 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 GOLGA8AA7E2F4 631 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 GOLGA8BA8MQT2 603 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 INO80B-WBP1J3KQ70 363 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 ARNTLO00327 626 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 PRRG2O14669 202 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 CCDC192P0DO97 292 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 CEACAM1P13688 526 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 GSPT1P15170 499 aaKnown RBP8.35□□□□□ -1.07
VPS45-210ENST00000497638 ARF4P18085 180 aaPredicted RBP8.35□□□□□ -1.07
VPS45-210ENST00000497638 CSRP1P21291 193 aaKnown RBP8.35□□□□□ -1.07
VPS45-210ENST00000497638 GARTP22102 1010 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 AKAP5P24588 427 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 RBM25P49756 843 aaKnown RBP8.35□□□□□ -1.07
VPS45-210ENST00000497638 NPEPPSP55786 919 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 POU5F1BQ06416 359 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 TFDP1Q14186 410 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 MXD4Q14582 209 aaPredicted RBP8.35□□□□□ -1.07
VPS45-210ENST00000497638 EMC2Q15006 297 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 Q4G0T1 1027 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 ZNF385BQ569K4 471 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 SLC27A1Q6PCB7 646 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 FBXL19Q6PCT2 694 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 CEP128Q6ZU80 1094 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 KBTBD6Q86V97 674 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 MFSD6LQ8IWD5 586 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 DAGLBQ8NCG7 672 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 CCDC148Q8NFR7 591 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 E2F7Q96AV8 911 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 TCTN2Q96GX1 697 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 CPB2Q96IY4 423 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 ZC3H10Q96K80 434 aaKnown RBP8.35□□□□□ -1.07
VPS45-210ENST00000497638 CEP170P1Q96L14 293 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 PAAF1Q9BRP4 392 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 G6PC3Q9BUM1 346 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 SCNM1Q9BWG6 230 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 TRPV4Q9HBA0 871 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 BRMS1Q9HCU9 246 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 RBM12Q9NTZ6 932 aaKnown RBP8.35□□□□□ -1.07
VPS45-210ENST00000497638 ZNF281Q9Y2X9 895 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 NEUROG3Q9Y4Z2 214 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 KCTD3Q9Y597 815 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 BACE2Q9Y5Z0 518 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 CDY1Q9Y6F8 540 aa8.35□□□□□ -1.07
VPS45-210ENST00000497638 FREM2Q5SZK8 3169 aa8.34□□□□□ -1.07
VPS45-210ENST00000497638 IGSF10Q6WRI0 2623 aa8.34□□□□□ -1.07
VPS45-210ENST00000497638 NCANO14594 1321 aa8.34□□□□□ -1.07
VPS45-210ENST00000497638 WDFY3Q8IZQ1 3526 aa8.34□□□□□ -1.07
VPS45-210ENST00000497638 CCDC196A0A1B0GTZ2 297 aa8.34□□□□□ -1.07
VPS45-210ENST00000497638 C4orf47A7E2U8 309 aa8.34□□□□□ -1.07
VPS45-210ENST00000497638 TMEM189-UBE2V1I3L0A0 370 aa8.34□□□□□ -1.07
VPS45-210ENST00000497638 PRRG1O14668 218 aa8.34□□□□□ -1.07
VPS45-210ENST00000497638 SLC27A2O14975 620 aa8.34□□□□□ -1.07
VPS45-210ENST00000497638 ADAMTS3O15072 1205 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms