RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 LSM14AQ8ND56 463 aaKnown RBP6.57□□□□□ -1.36
BRCA1-224ENST00000497488 GPR150Q8NGU9 434 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 ZCCHC10Q8TBK6 192 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 NCSTNQ92542 709 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 DDX17Q92841 729 aaKnown RBP6.57□□□□□ -1.36
BRCA1-224ENST00000497488 CENPTQ96BT3 561 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 LENG1Q96BZ8 264 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-224ENST00000497488 ZNF653Q96CK0 615 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 PEX11GQ96HA9 241 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 NR1H4Q96RI1 486 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-224ENST00000497488 TTPALQ9BTX7 342 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 MAK16Q9BXY0 300 aaKnown RBP6.57□□□□□ -1.36
BRCA1-224ENST00000497488 PACSIN1Q9BY11 444 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 FAM83DQ9H4H8 585 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 UNKLQ9H9P5 680 aaKnown RBP6.57□□□□□ -1.36
BRCA1-224ENST00000497488 GPR35Q9HC97 309 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 FSCN3Q9NQT6 498 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 RXFP3Q9NSD7 469 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 TAB2Q9NYJ8 693 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 SAE1Q9UBE0 346 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-224ENST00000497488 RBPJLQ9UBG7 517 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 BLOC1S6Q9UL45 172 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 AGTPBP1Q9UPW5 1226 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 ATP11BQ9Y2G3 1177 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 MTF2Q9Y483 593 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-224ENST00000497488 CCL27Q9Y4X3 112 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 CARMIL1Q5VZK9 1371 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 PNMA6EA0A0J9YXQ4 647 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 TGFB1I1O43294 461 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 RRP9O43818 475 aaKnown RBP6.56□□□□□ -1.36
BRCA1-224ENST00000497488 FMO6PO60774 539 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 ENTPD3O75355 529 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 ITGA10O75578 1167 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 SLC22A3O75751 556 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 RPP40O75818 363 aaKnown RBP6.56□□□□□ -1.36
BRCA1-224ENST00000497488 METTL18O95568 372 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 PIM1P11309 404 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-224ENST00000497488 KRT2P35908 639 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 ALDH1A3P47895 512 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 TDO2P48775 406 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 SLC12A2P55011 1212 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 PSMC1P62191 440 aaKnown RBP6.56□□□□□ -1.36
BRCA1-224ENST00000497488 DDR1Q08345 913 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 MYO1EQ12965 1108 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 TDGQ13569 410 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 GRIK4Q16099 956 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 INSCQ1MX18 579 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 ARMC4Q5T2S8 1044 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 TRIM68Q6AZZ1 485 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 LIPIQ6XZB0 460 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 FAM83HQ6ZRV2 1179 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-224ENST00000497488 PDSS2Q86YH6 399 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 CLEC10AQ8IUN9 316 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 SCN4BQ8IWT1 228 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 CNTROBQ8N137 903 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 TMCO5AQ8N6Q1 288 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 TRIML1Q8N9V2 468 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 LINS1Q8NG48 757 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 WFDC12Q8WWY7 111 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 NKD2Q969F2 451 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-224ENST00000497488 PGAP3Q96FM1 320 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-224ENST00000497488 SPATA5L1Q9BVQ7 753 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 DNAI2Q9GZS0 605 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 SLC25A32Q9H2D1 315 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 DEF6Q9H4E7 631 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 RMI1Q9H9A7 625 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 RRAGCQ9HB90 399 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 SPATA6Q9NWH7 488 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-224ENST00000497488 PPP1R14DQ9NXH3 145 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 SLC25A10Q9UBX3 287 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-224ENST00000497488 HPSEQ9Y251 543 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 ATP6V0A2Q9Y487 856 aa6.56□□□□□ -1.36
BRCA1-224ENST00000497488 ZNF785A8K8V0 405 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 A8MV72 311 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-224ENST00000497488 TAF4O00268 1085 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 TP73O15350 636 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 IPO8O15397 1037 aaKnown RBP6.55□□□□□ -1.36
BRCA1-224ENST00000497488 HNRNPRO43390 633 aaKnown RBP6.55□□□□□ -1.36
BRCA1-224ENST00000497488 TNFSF14O43557 240 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 CCNT2O60583 730 aaKnown RBP6.55□□□□□ -1.36
BRCA1-224ENST00000497488 TULP3O75386 442 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 TAF5LO75529 589 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 FOSL1P15407 271 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 PTPN7P35236 360 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 GPS1Q13098 491 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 SP140Q13342 867 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 SLMAPQ14BN4 828 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 AMOTQ4VCS5 1084 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 CRB2Q5IJ48 1285 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 MANEALQ5VSG8 457 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 VASNQ6EMK4 673 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 ABLIM2Q6H8Q1 611 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 GALNT17Q6IS24 598 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 MTFR2Q6P444 385 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 IYDQ6PHW0 289 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 SLC2A7Q6PXP3 512 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 ABRAXAS1Q6UWZ7 409 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 SEM1Q6ZVN7 128 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 ZNF572Q7Z3I7 529 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-224ENST00000497488 GPR149Q86SP6 731 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms