RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 PGDP52209 483 aa5.09□□□□□ -1.59
TRIM4-205ENST00000496896 PSG6Q00889 435 aa5.09□□□□□ -1.59
TRIM4-205ENST00000496896 GALEQ14376 348 aa5.09□□□□□ -1.59
TRIM4-205ENST00000496896 CEP78Q5JTW2 689 aa5.09□□□□□ -1.59
TRIM4-205ENST00000496896 SLC18B1Q6NT16 456 aa5.09□□□□□ -1.59
TRIM4-205ENST00000496896 PPP4R4Q6NUP7 873 aa5.09□□□□□ -1.59
TRIM4-205ENST00000496896 ZNF813Q6ZN06 617 aa5.09□□□□□ -1.59
TRIM4-205ENST00000496896 DPY19L3Q6ZPD9 716 aa5.09□□□□□ -1.59
TRIM4-205ENST00000496896 KCTD20Q7Z5Y7 419 aa5.09□□□□□ -1.59
TRIM4-205ENST00000496896 YTHDF3Q7Z739 585 aaKnown RBP5.09□□□□□ -1.59
TRIM4-205ENST00000496896 ZNF398Q8TD17 642 aa5.09□□□□□ -1.59
TRIM4-205ENST00000496896 SCARB1Q8WTV0 552 aa5.09□□□□□ -1.59
TRIM4-205ENST00000496896 TTC17Q96AE7 1141 aa5.09□□□□□ -1.59
TRIM4-205ENST00000496896 MMS19Q96T76 1030 aa5.09□□□□□ -1.59
TRIM4-205ENST00000496896 UNKQ9C0B0 810 aaKnown RBP5.09□□□□□ -1.59
TRIM4-205ENST00000496896 PRSS22Q9GZN4 317 aa5.09□□□□□ -1.59
TRIM4-205ENST00000496896 DDX21Q9NR30 783 aaKnown RBP eCLIP5.09□□□□□ -1.59
TRIM4-205ENST00000496896 ASIC5Q9NY37 505 aa5.09□□□□□ -1.59
TRIM4-205ENST00000496896 MID2Q9UJV3 735 aa5.09□□□□□ -1.59
TRIM4-205ENST00000496896 HDAC9Q9UKV0 1011 aa5.09□□□□□ -1.59
TRIM4-205ENST00000496896 CES2O00748 559 aa5.08□□□□□ -1.6
TRIM4-205ENST00000496896 SPRY2O43597 315 aa5.08□□□□□ -1.6
TRIM4-205ENST00000496896 MT-CO3P00414 261 aa5.08□□□□□ -1.6
TRIM4-205ENST00000496896 PARP1P09874 1014 aaKnown RBP5.08□□□□□ -1.6
TRIM4-205ENST00000496896 CYP2D6P10635 497 aa5.08□□□□□ -1.6
TRIM4-205ENST00000496896 CYP2A6P11509 494 aaPredicted RBP5.08□□□□□ -1.6
TRIM4-205ENST00000496896 TPH1P17752 444 aa5.08□□□□□ -1.6
TRIM4-205ENST00000496896 LMAN2Q12907 356 aa5.08□□□□□ -1.6
TRIM4-205ENST00000496896 CLCA4Q14CN2 919 aa5.08□□□□□ -1.6
TRIM4-205ENST00000496896 ST3GAL2Q16842 350 aa5.08□□□□□ -1.6
TRIM4-205ENST00000496896 FAM187BQ17R55 369 aa5.08□□□□□ -1.6
TRIM4-205ENST00000496896 C11orf87Q6NUJ2 197 aa5.08□□□□□ -1.6
TRIM4-205ENST00000496896 SERPINA13PQ6UXR4 307 aa5.08□□□□□ -1.6
TRIM4-205ENST00000496896 C14orf80Q86SX3 495 aa5.08□□□□□ -1.6
TRIM4-205ENST00000496896 DGKHQ86XP1 1220 aa5.08□□□□□ -1.6
TRIM4-205ENST00000496896 NGDNQ8NEJ9 315 aaKnown RBP5.08□□□□□ -1.6
TRIM4-205ENST00000496896 RPL36ALQ969Q0 106 aaKnown RBP5.08□□□□□ -1.6
TRIM4-205ENST00000496896 WDYHV1Q96HA8 205 aa5.08□□□□□ -1.6
TRIM4-205ENST00000496896 BRIP1Q9BX63 1249 aa5.08□□□□□ -1.6
TRIM4-205ENST00000496896 RNF7Q9UBF6 113 aa5.08□□□□□ -1.6
TRIM4-205ENST00000496896 NKX1-2Q9UD57 310 aaPredicted RBP5.08□□□□□ -1.6
TRIM4-205ENST00000496896 WDR17Q8IZU2 1322 aa5.07□□□□□ -1.6
TRIM4-205ENST00000496896 H3BNC9 293 aa5.07□□□□□ -1.6
TRIM4-205ENST00000496896 RAB27BO00194 218 aa5.07□□□□□ -1.6
TRIM4-205ENST00000496896 MT-ND5P03915 603 aa5.07□□□□□ -1.6
TRIM4-205ENST00000496896 A1BGP04217 495 aa5.07□□□□□ -1.6
TRIM4-205ENST00000496896 CREB1P16220 341 aa5.07□□□□□ -1.6
TRIM4-205ENST00000496896 ATF3P18847 181 aa5.07□□□□□ -1.6
TRIM4-205ENST00000496896 CARSP49589 748 aaKnown RBP5.07□□□□□ -1.6
TRIM4-205ENST00000496896 DIO1P49895 249 aa5.07□□□□□ -1.6
TRIM4-205ENST00000496896 DAZAP2Q15038 168 aaPredicted RBP5.07□□□□□ -1.6
TRIM4-205ENST00000496896 PLAG1Q6DJT9 500 aa5.07□□□□□ -1.6
TRIM4-205ENST00000496896 UNC13DQ70J99 1090 aa5.07□□□□□ -1.6
TRIM4-205ENST00000496896 PHKBQ93100 1093 aa5.07□□□□□ -1.6
TRIM4-205ENST00000496896 ZC3H10Q96K80 434 aaKnown RBP5.07□□□□□ -1.6
TRIM4-205ENST00000496896 SNX22Q96L94 193 aa5.07□□□□□ -1.6
TRIM4-205ENST00000496896 C5orf34Q96MH7 638 aa5.07□□□□□ -1.6
TRIM4-205ENST00000496896 DNAJB11Q9UBS4 358 aa5.07□□□□□ -1.6
TRIM4-205ENST00000496896 VPS51Q9UID3 782 aa5.07□□□□□ -1.6
TRIM4-205ENST00000496896 SMIM35A0A1B0GVV1 85 aa5.06□□□□□ -1.6
TRIM4-205ENST00000496896 TMEM232C9JQI7 657 aa5.06□□□□□ -1.6
TRIM4-205ENST00000496896 EXOC5O00471 708 aa5.06□□□□□ -1.6
TRIM4-205ENST00000496896 BCAR3O75815 825 aa5.06□□□□□ -1.6
TRIM4-205ENST00000496896 ANXA2P07355 339 aaKnown RBP5.06□□□□□ -1.6
TRIM4-205ENST00000496896 APEHP13798 732 aaKnown RBP5.06□□□□□ -1.6
TRIM4-205ENST00000496896 HGFP14210 728 aa5.06□□□□□ -1.6
TRIM4-205ENST00000496896 MPGP29372 298 aa5.06□□□□□ -1.6
TRIM4-205ENST00000496896 PTGER1P34995 402 aa5.06□□□□□ -1.6
TRIM4-205ENST00000496896 HTRA4P83105 476 aaPredicted RBP5.06□□□□□ -1.6
TRIM4-205ENST00000496896 LARS2Q15031 903 aaKnown RBP5.06□□□□□ -1.6
TRIM4-205ENST00000496896 SUPT20HL1Q3ZLR7 823 aa5.06□□□□□ -1.6
TRIM4-205ENST00000496896 MEX3CQ5U5Q3 659 aaKnown RBP5.06□□□□□ -1.6
TRIM4-205ENST00000496896 ZBTB45Q96K62 511 aaPredicted RBP5.06□□□□□ -1.6
TRIM4-205ENST00000496896 CCDC17Q96LX7 622 aa5.06□□□□□ -1.6
TRIM4-205ENST00000496896 FAM227BQ96M60 508 aa5.06□□□□□ -1.6
TRIM4-205ENST00000496896 FAM118BQ9BPY3 351 aa5.06□□□□□ -1.6
TRIM4-205ENST00000496896 TMEM79Q9BSE2 394 aa5.06□□□□□ -1.6
TRIM4-205ENST00000496896 SELENOOQ9BVL4 669 aa5.06□□□□□ -1.6
TRIM4-205ENST00000496896 QTRT1Q9BXR0 403 aaKnown RBP5.06□□□□□ -1.6
TRIM4-205ENST00000496896 KLHL42Q9P2K6 505 aa5.06□□□□□ -1.6
TRIM4-205ENST00000496896 MGAT4CQ9UBM8 478 aa5.06□□□□□ -1.6
TRIM4-205ENST00000496896 ZNF212Q9UDV6 495 aa5.06□□□□□ -1.6
TRIM4-205ENST00000496896 STEAP1Q9UHE8 339 aa5.06□□□□□ -1.6
TRIM4-205ENST00000496896 ITGB1BP2Q9UKP3 347 aa5.06□□□□□ -1.6
TRIM4-205ENST00000496896 RIMKLBQ9ULI2 386 aa5.06□□□□□ -1.6
TRIM4-205ENST00000496896 COL15A1P39059 1388 aa5.05□□□□□ -1.6
TRIM4-205ENST00000496896 SNX2O60749 519 aa5.05□□□□□ -1.6
TRIM4-205ENST00000496896 MOSPD3O75425 235 aa5.05□□□□□ -1.6
TRIM4-205ENST00000496896 GCATO75600 419 aa5.05□□□□□ -1.6
TRIM4-205ENST00000496896 SFPQP23246 707 aaKnown RBP eCLIP5.05□□□□□ -1.6
TRIM4-205ENST00000496896 ALDH5A1P51649 535 aaPredicted RBP5.05□□□□□ -1.6
TRIM4-205ENST00000496896 CFHR3Q02985 330 aa5.05□□□□□ -1.6
TRIM4-205ENST00000496896 MANEALQ5VSG8 457 aa5.05□□□□□ -1.6
TRIM4-205ENST00000496896 USP49Q70CQ1 688 aa5.05□□□□□ -1.6
TRIM4-205ENST00000496896 KRT28Q7Z3Y7 464 aa5.05□□□□□ -1.6
TRIM4-205ENST00000496896 PNPLA1Q8N8W4 532 aa5.05□□□□□ -1.6
TRIM4-205ENST00000496896 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.05□□□□□ -1.6
TRIM4-205ENST00000496896 PIGOQ8TEQ8 1089 aa5.05□□□□□ -1.6
TRIM4-205ENST00000496896 PNISRQ8TF01 805 aaKnown RBP5.05□□□□□ -1.6
TRIM4-205ENST00000496896 MAFFQ9ULX9 164 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms