RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 MYO16Q9Y6X6 1858 aa20.24■□□□□ 0.83
CTDSP1-213ENST00000496785 ARNTLO00327 626 aa20.24■□□□□ 0.83
CTDSP1-213ENST00000496785 SLC9A3R1O14745 358 aaPredicted RBP20.24■□□□□ 0.83
CTDSP1-213ENST00000496785 ACADSBP45954 432 aa20.24■□□□□ 0.83
CTDSP1-213ENST00000496785 IFNAR2P48551 515 aa20.24■□□□□ 0.83
CTDSP1-213ENST00000496785 KPNA1P52294 538 aaPredicted RBP20.24■□□□□ 0.83
CTDSP1-213ENST00000496785 NUBP1P53384 320 aa20.24■□□□□ 0.83
CTDSP1-213ENST00000496785 AMPD2Q01433 879 aa20.24■□□□□ 0.83
CTDSP1-213ENST00000496785 APBA1Q02410 837 aa20.24■□□□□ 0.83
CTDSP1-213ENST00000496785 UBXN1Q04323 297 aa20.24■□□□□ 0.83
CTDSP1-213ENST00000496785 DRAP1Q14919 205 aaPredicted RBP20.24■□□□□ 0.83
CTDSP1-213ENST00000496785 ITPRIPL2Q3MIP1 535 aa20.24■□□□□ 0.83
CTDSP1-213ENST00000496785 TTC16Q8NEE8 873 aa20.24■□□□□ 0.83
CTDSP1-213ENST00000496785 SLC35F5Q8WV83 523 aa20.24■□□□□ 0.83
CTDSP1-213ENST00000496785 SECISBP2LQ93073 1101 aaKnown RBP20.24■□□□□ 0.83
CTDSP1-213ENST00000496785 ATP2A3Q93084 1043 aa20.24■□□□□ 0.83
CTDSP1-213ENST00000496785 EXOC4Q96A65 974 aa20.24■□□□□ 0.83
CTDSP1-213ENST00000496785 LRRC3BQ96PB8 259 aa20.24■□□□□ 0.83
CTDSP1-213ENST00000496785 PRRX2Q99811 253 aa20.24■□□□□ 0.83
CTDSP1-213ENST00000496785 RNF38Q9H0F5 515 aa20.24■□□□□ 0.83
CTDSP1-213ENST00000496785 CCSER2Q9H7U1 834 aa20.24■□□□□ 0.83
CTDSP1-213ENST00000496785 HEBP1Q9NRV9 189 aa20.24■□□□□ 0.83
CTDSP1-213ENST00000496785 GKN1Q9NS71 199 aa20.24■□□□□ 0.83
CTDSP1-213ENST00000496785 HCN4Q9Y3Q4 1203 aa20.24■□□□□ 0.83
CTDSP1-213ENST00000496785 CEP83Q9Y592 693 aa20.24■□□□□ 0.83
CTDSP1-213ENST00000496785 FHOD1Q9Y613 1164 aa20.24■□□□□ 0.83
CTDSP1-213ENST00000496785 PIAS3Q9Y6X2 628 aa20.24■□□□□ 0.83
CTDSP1-213ENST00000496785 A0A1W2PQH9 124 aa20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 KANSL1LA0AUZ9 987 aa20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 GOLGA6L19H0YKK7 550 aa20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 LEFTY2O00292 366 aa20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 NCAM2O15394 837 aa20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 SART1O43290 800 aaKnown RBP20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 FBXO21O94952 628 aa20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 PDGFBP01127 241 aaPredicted RBP20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 RARGP13631 454 aa20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 AOC1P19801 751 aa20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 ADIGQ0VDE8 80 aa20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 PM20D1Q6GTS8 502 aa20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 FAM71AQ8IYT1 594 aa20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 NEK11Q8NG66 645 aa20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 STK32AQ8WU08 396 aa20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 OSCP1Q8WVF1 389 aa20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 ERGIC2Q96RQ1 377 aa20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 FAM83CQ9BQN1 747 aa20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 ZSWIM1Q9BR11 485 aa20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 STK33Q9BYT3 514 aa20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 OSBPL6Q9BZF3 934 aa20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 ULBP1Q9BZM6 244 aa20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 HSD3B7Q9H2F3 369 aa20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 OLA1Q9NTK5 396 aaKnown RBP20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 DUS2Q9NX74 493 aaKnown RBP20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 SMPD4Q9NXE4 827 aa20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 TBC1D14Q9P2M4 693 aa20.23■□□□□ 0.83
CTDSP1-213ENST00000496785 HELZP42694 1942 aaKnown RBP20.22■□□□□ 0.83
CTDSP1-213ENST00000496785 TULP2O00295 520 aa20.22■□□□□ 0.83
CTDSP1-213ENST00000496785 FOXN3O00409 490 aaPredicted RBP20.22■□□□□ 0.83
CTDSP1-213ENST00000496785 KRT9P35527 623 aa20.22■□□□□ 0.83
CTDSP1-213ENST00000496785 SNX16P57768 344 aa20.22■□□□□ 0.83
CTDSP1-213ENST00000496785 YWHAGP61981 247 aaKnown RBP eCLIP20.22■□□□□ 0.83
CTDSP1-213ENST00000496785 NR1H3Q13133 447 aa20.22■□□□□ 0.83
CTDSP1-213ENST00000496785 RUNX3Q13761 415 aa20.22■□□□□ 0.83
CTDSP1-213ENST00000496785 IQCB1Q15051 598 aa20.22■□□□□ 0.83
CTDSP1-213ENST00000496785 SYCP1Q15431 976 aa20.22■□□□□ 0.83
CTDSP1-213ENST00000496785 CWF19L1Q69YN2 538 aaKnown RBP20.22■□□□□ 0.83
CTDSP1-213ENST00000496785 DPY19L2P1Q6NXN4 242 aa20.22■□□□□ 0.83
CTDSP1-213ENST00000496785 RALGPS2Q86X27 583 aaPredicted RBP20.22■□□□□ 0.83
CTDSP1-213ENST00000496785 CPA6Q8N4T0 437 aa20.22■□□□□ 0.83
CTDSP1-213ENST00000496785 IRGQQ8WZA9 623 aa20.22■□□□□ 0.83
CTDSP1-213ENST00000496785 GOLGA1Q92805 767 aa20.22■□□□□ 0.83
CTDSP1-213ENST00000496785 ZFYVE19Q96K21 471 aa20.22■□□□□ 0.83
CTDSP1-213ENST00000496785 NOX5Q96PH1 765 aa20.22■□□□□ 0.83
CTDSP1-213ENST00000496785 SPAG5Q96R06 1193 aa20.22■□□□□ 0.83
CTDSP1-213ENST00000496785 DDX23Q9BUQ8 820 aaKnown RBP20.22■□□□□ 0.83
CTDSP1-213ENST00000496785 NAA15Q9BXJ9 866 aaKnown RBP20.22■□□□□ 0.83
CTDSP1-213ENST00000496785 KCNH6Q9H252 994 aa20.22■□□□□ 0.83
CTDSP1-213ENST00000496785 NMUR1Q9HB89 426 aa20.22■□□□□ 0.83
CTDSP1-213ENST00000496785 FAM207AQ9NSI2 230 aaPredicted RBP20.22■□□□□ 0.83
CTDSP1-213ENST00000496785 DNMT3LQ9UJW3 386 aa20.22■□□□□ 0.83
CTDSP1-213ENST00000496785 PCDHGC3Q9UN70 934 aa20.22■□□□□ 0.83
CTDSP1-213ENST00000496785 SH3BP1Q9Y3L3 701 aa20.22■□□□□ 0.83
CTDSP1-213ENST00000496785 E2F8A0AVK6 867 aa20.21■□□□□ 0.83
CTDSP1-213ENST00000496785 NFATC1O95644 943 aa20.21■□□□□ 0.83
CTDSP1-213ENST00000496785 ATP1A3P13637 1013 aa20.21■□□□□ 0.83
CTDSP1-213ENST00000496785 AVPR2P30518 371 aa20.21■□□□□ 0.83
CTDSP1-213ENST00000496785 GPD2P43304 727 aa20.21■□□□□ 0.83
CTDSP1-213ENST00000496785 MAGEA9P43362 315 aa20.21■□□□□ 0.83
CTDSP1-213ENST00000496785 C10orf120Q5SQS8 335 aa20.21■□□□□ 0.83
CTDSP1-213ENST00000496785 BTBD8Q5XKL5 378 aa20.21■□□□□ 0.83
CTDSP1-213ENST00000496785 PMF1Q6P1K2 205 aa20.21■□□□□ 0.83
CTDSP1-213ENST00000496785 RSRC2Q7L4I2 434 aaKnown RBP20.21■□□□□ 0.83
CTDSP1-213ENST00000496785 OTUB2Q96DC9 234 aa20.21■□□□□ 0.83
CTDSP1-213ENST00000496785 TRIM62Q9BVG3 475 aa20.21■□□□□ 0.83
CTDSP1-213ENST00000496785 GANQ9H2C0 597 aa20.21■□□□□ 0.83
CTDSP1-213ENST00000496785 PDCL3Q9H2J4 239 aa20.21■□□□□ 0.83
CTDSP1-213ENST00000496785 CBX8Q9HC52 389 aa20.21■□□□□ 0.83
CTDSP1-213ENST00000496785 ST7Q9NRC1 585 aa20.21■□□□□ 0.83
CTDSP1-213ENST00000496785 CFAP97Q9P2B7 532 aa20.21■□□□□ 0.83
CTDSP1-213ENST00000496785 LSM7Q9UK45 103 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms