RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 DDX23Q9BUQ8 820 aaKnown RBP23.91■■□□□ 1.42
CHRD-217ENST00000496527 HSD3B7Q9H2F3 369 aa23.91■■□□□ 1.42
CHRD-217ENST00000496527 C8orf33Q9H7E9 229 aaPredicted RBP23.91■■□□□ 1.42
CHRD-217ENST00000496527 NMUR1Q9HB89 426 aa23.91■■□□□ 1.42
CHRD-217ENST00000496527 DUS2Q9NX74 493 aaKnown RBP23.91■■□□□ 1.42
CHRD-217ENST00000496527 GTSE1Q9NYZ3 720 aa23.91■■□□□ 1.42
CHRD-217ENST00000496527 ZDBF2Q9HCK1 2354 aa23.91■■□□□ 1.42
CHRD-217ENST00000496527 LRRC10BA6NIK2 292 aa23.9■■□□□ 1.42
CHRD-217ENST00000496527 FOXN3O00409 490 aaPredicted RBP23.9■■□□□ 1.42
CHRD-217ENST00000496527 ZBED1O96006 694 aa23.9■■□□□ 1.42
CHRD-217ENST00000496527 RALAP11233 206 aa23.9■■□□□ 1.42
CHRD-217ENST00000496527 RARGP13631 454 aa23.9■■□□□ 1.42
CHRD-217ENST00000496527 CD72P21854 359 aa23.9■■□□□ 1.42
CHRD-217ENST00000496527 ATP5C1P36542 298 aaKnown RBP23.9■■□□□ 1.42
CHRD-217ENST00000496527 IFNAR2P48551 515 aa23.9■■□□□ 1.42
CHRD-217ENST00000496527 MLLT6P55198 1093 aaPredicted RBP23.9■■□□□ 1.42
CHRD-217ENST00000496527 ZXDBP98169 803 aa23.9■■□□□ 1.42
CHRD-217ENST00000496527 UBXN2BQ14CS0 331 aa23.9■■□□□ 1.42
CHRD-217ENST00000496527 ITPRIPL2Q3MIP1 535 aa23.9■■□□□ 1.42
CHRD-217ENST00000496527 TRIM68Q6AZZ1 485 aa23.9■■□□□ 1.42
CHRD-217ENST00000496527 SCD5Q86SK9 330 aa23.9■■□□□ 1.42
CHRD-217ENST00000496527 TADA2BQ86TJ2 420 aa23.9■■□□□ 1.42
CHRD-217ENST00000496527 SIX6OS1Q8N1H7 587 aa23.9■■□□□ 1.42
CHRD-217ENST00000496527 TMEM105Q8N8V8 129 aa23.9■■□□□ 1.42
CHRD-217ENST00000496527 TTC8Q8TAM2 541 aa23.9■■□□□ 1.42
CHRD-217ENST00000496527 OSCP1Q8WVF1 389 aa23.9■■□□□ 1.42
CHRD-217ENST00000496527 ULBP1Q9BZM6 244 aa23.9■■□□□ 1.42
CHRD-217ENST00000496527 FOXQ1Q9C009 403 aa23.9■■□□□ 1.42
CHRD-217ENST00000496527 EBF3Q9H4W6 596 aa23.9■■□□□ 1.42
CHRD-217ENST00000496527 CYLDQ9NQC7 956 aa23.9■■□□□ 1.42
CHRD-217ENST00000496527 OSER1Q9NX31 292 aa23.9■■□□□ 1.42
CHRD-217ENST00000496527 MRPS17Q9Y2R5 130 aaKnown RBP23.9■■□□□ 1.42
CHRD-217ENST00000496527 SIT1Q9Y3P8 196 aa23.9■■□□□ 1.42
CHRD-217ENST00000496527 FHOD1Q9Y613 1164 aa23.9■■□□□ 1.42
CHRD-217ENST00000496527 LGALS16A8MUM7 142 aa23.89■■□□□ 1.41
CHRD-217ENST00000496527 PI15O43692 258 aa23.89■■□□□ 1.41
CHRD-217ENST00000496527 UCHL3P15374 230 aa23.89■■□□□ 1.41
CHRD-217ENST00000496527 RGS7P49802 495 aa23.89■■□□□ 1.41
CHRD-217ENST00000496527 PTK2Q05397 1052 aa23.89■■□□□ 1.41
CHRD-217ENST00000496527 ADIGQ0VDE8 80 aa23.89■■□□□ 1.41
CHRD-217ENST00000496527 RUNX3Q13761 415 aa23.89■■□□□ 1.41
CHRD-217ENST00000496527 DRAP1Q14919 205 aaPredicted RBP23.89■■□□□ 1.41
CHRD-217ENST00000496527 PM20D1Q6GTS8 502 aa23.89■■□□□ 1.41
CHRD-217ENST00000496527 MSANTD3Q96H12 275 aa23.89■■□□□ 1.41
CHRD-217ENST00000496527 NELL2Q99435 816 aa23.89■■□□□ 1.41
CHRD-217ENST00000496527 ACP6Q9NPH0 428 aa23.89■■□□□ 1.41
CHRD-217ENST00000496527 PLCB1Q9NQ66 1216 aa23.89■■□□□ 1.41
CHRD-217ENST00000496527 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.89■■□□□ 1.41
CHRD-217ENST00000496527 CLIC5Q9NZA1 410 aa23.89■■□□□ 1.41
CHRD-217ENST00000496527 CFAP97Q9P2B7 532 aa23.89■■□□□ 1.41
CHRD-217ENST00000496527 WNT6Q9Y6F9 365 aa23.89■■□□□ 1.41
CHRD-217ENST00000496527 MYO16Q9Y6X6 1858 aa23.89■■□□□ 1.41
CHRD-217ENST00000496527 TICRRQ7Z2Z1 1910 aa23.88■■□□□ 1.41
CHRD-217ENST00000496527 ATP1A3P13637 1013 aa23.88■■□□□ 1.41
CHRD-217ENST00000496527 LCP1P13796 627 aa23.88■■□□□ 1.41
CHRD-217ENST00000496527 UBXN1Q04323 297 aa23.88■■□□□ 1.41
CHRD-217ENST00000496527 MEA1Q16626 185 aa23.88■■□□□ 1.41
CHRD-217ENST00000496527 ZSCAN23Q3MJ62 389 aa23.88■■□□□ 1.41
CHRD-217ENST00000496527 C10orf120Q5SQS8 335 aa23.88■■□□□ 1.41
CHRD-217ENST00000496527 PMF1Q6P1K2 205 aa23.88■■□□□ 1.41
CHRD-217ENST00000496527 C1orf228Q6PIY5 440 aa23.88■■□□□ 1.41
CHRD-217ENST00000496527 KIAA1958Q8N8K9 716 aa23.88■■□□□ 1.41
CHRD-217ENST00000496527 PJA1Q8NG27 643 aa23.88■■□□□ 1.41
CHRD-217ENST00000496527 FAM3CQ92520 227 aa23.88■■□□□ 1.41
CHRD-217ENST00000496527 HSFY1Q96LI6 401 aa23.88■■□□□ 1.41
CHRD-217ENST00000496527 PCMTD1Q96MG8 357 aaPredicted RBP23.88■■□□□ 1.41
CHRD-217ENST00000496527 CDK5RAP1Q96SZ6 601 aaKnown RBP23.88■■□□□ 1.41
CHRD-217ENST00000496527 LTB4R2Q9NPC1 389 aa23.88■■□□□ 1.41
CHRD-217ENST00000496527 HPS4Q9NQG7 708 aa23.88■■□□□ 1.41
CHRD-217ENST00000496527 FAM170BA6NMN3 283 aa23.87■■□□□ 1.41
CHRD-217ENST00000496527 TBX18O95935 607 aa23.87■■□□□ 1.41
CHRD-217ENST00000496527 ARSAP15289 507 aa23.87■■□□□ 1.41
CHRD-217ENST00000496527 SOX9P48436 509 aa23.87■■□□□ 1.41
CHRD-217ENST00000496527 BPIFB4P59827 614 aa23.87■■□□□ 1.41
CHRD-217ENST00000496527 YWHAGP61981 247 aaKnown RBP eCLIP23.87■■□□□ 1.41
CHRD-217ENST00000496527 DENND1BQ6P3S1 775 aa23.87■■□□□ 1.41
CHRD-217ENST00000496527 KLHDC10Q6PID8 442 aa23.87■■□□□ 1.41
CHRD-217ENST00000496527 RALGPS2Q86X27 583 aaPredicted RBP23.87■■□□□ 1.41
CHRD-217ENST00000496527 FAM71AQ8IYT1 594 aa23.87■■□□□ 1.41
CHRD-217ENST00000496527 ZNF276Q8N554 614 aa23.87■■□□□ 1.41
CHRD-217ENST00000496527 ATP2A3Q93084 1043 aa23.87■■□□□ 1.41
CHRD-217ENST00000496527 ZFRQ96KR1 1074 aaKnown RBP23.87■■□□□ 1.41
CHRD-217ENST00000496527 NAA15Q9BXJ9 866 aaKnown RBP23.87■■□□□ 1.41
CHRD-217ENST00000496527 OSBPL6Q9BZF3 934 aa23.87■■□□□ 1.41
CHRD-217ENST00000496527 CNGB3Q9NQW8 809 aa23.87■■□□□ 1.41
CHRD-217ENST00000496527 DNMT3LQ9UJW3 386 aa23.87■■□□□ 1.41
CHRD-217ENST00000496527 NUDT5Q9UKK9 219 aa23.87■■□□□ 1.41
CHRD-217ENST00000496527 SH3BP1Q9Y3L3 701 aa23.87■■□□□ 1.41
CHRD-217ENST00000496527 SPECC1L-ADORA2AF8WAN1 911 aa23.86■■□□□ 1.41
CHRD-217ENST00000496527 SLC9A3R1O14745 358 aaPredicted RBP23.86■■□□□ 1.41
CHRD-217ENST00000496527 PNMA6AP0CW24 399 aaPredicted RBP23.86■■□□□ 1.41
CHRD-217ENST00000496527 CLCN1P35523 988 aa23.86■■□□□ 1.41
CHRD-217ENST00000496527 GPD2P43304 727 aa23.86■■□□□ 1.41
CHRD-217ENST00000496527 KLK7P49862 253 aa23.86■■□□□ 1.41
CHRD-217ENST00000496527 GOLGA8FQ08AF8 430 aa23.86■■□□□ 1.41
CHRD-217ENST00000496527 GOLGA8DPQ0D2H9 430 aa23.86■■□□□ 1.41
CHRD-217ENST00000496527 SYCP1Q15431 976 aa23.86■■□□□ 1.41
CHRD-217ENST00000496527 EML3Q32P44 896 aa23.86■■□□□ 1.41
CHRD-217ENST00000496527 APTXQ7Z2E3 356 aaKnown RBP23.86■■□□□ 1.41
CHRD-217ENST00000496527 SCML4Q8N228 414 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms