RNA–Protein interactions for RNA: ENST00000495952.5

SURF1-204, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 2

Gene SURF1, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-204ENST00000495952 C1orf127Q8N9H9 656 aa10.25□□□□□ -0.77
SURF1-204ENST00000495952 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.25□□□□□ -0.77
SURF1-204ENST00000495952 RFWD2Q8NHY2 731 aa10.25□□□□□ -0.77
SURF1-204ENST00000495952 CXorf38Q8TB03 319 aa10.25□□□□□ -0.77
SURF1-204ENST00000495952 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.25□□□□□ -0.77
SURF1-204ENST00000495952 ACMSDQ8TDX5 336 aa10.25□□□□□ -0.77
SURF1-204ENST00000495952 ACSF2Q96CM8 615 aaPredicted RBP10.25□□□□□ -0.77
SURF1-204ENST00000495952 PEBP4Q96S96 227 aa10.25□□□□□ -0.77
SURF1-204ENST00000495952 SMARCAD1Q9H4L7 1026 aa10.25□□□□□ -0.77
SURF1-204ENST00000495952 DENND2DQ9H6A0 471 aaPredicted RBP10.25□□□□□ -0.77
SURF1-204ENST00000495952 GBA2Q9HCG7 927 aaPredicted RBP10.25□□□□□ -0.77
SURF1-204ENST00000495952 XAB2Q9HCS7 855 aaKnown RBP10.25□□□□□ -0.77
SURF1-204ENST00000495952 SIRPGQ9P1W8 387 aa10.25□□□□□ -0.77
SURF1-204ENST00000495952 SLC17A7Q9P2U7 560 aa10.25□□□□□ -0.77
SURF1-204ENST00000495952 HEY2Q9UBP5 337 aa10.25□□□□□ -0.77
SURF1-204ENST00000495952 GTF2IRD1Q9UHL9 959 aa10.25□□□□□ -0.77
SURF1-204ENST00000495952 C2CD2Q9Y426 696 aa10.25□□□□□ -0.77
SURF1-204ENST00000495952 TSC2P49815 1807 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 TCRBV7S3A2A0A539 114 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 A6NHS1 94 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 FAM159BA6NKW6 160 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 TTLL13PA6NNM8 815 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 NFKBIEO00221 500 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 GSC2O15499 205 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 BANF1O75531 89 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 ZBED1O96006 694 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 APOEP02649 317 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 CD48P09326 243 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 MLNP12872 115 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 PTPN9P43378 593 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 YWHAGP61981 247 aaKnown RBP eCLIP10.24□□□□□ -0.77
SURF1-204ENST00000495952 IRX1P78414 480 aaPredicted RBP10.24□□□□□ -0.77
SURF1-204ENST00000495952 GAD2Q05329 585 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 FAAP100Q0VG06 881 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 DNAL1Q4LDG9 190 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 PLEKHG4Q58EX7 1191 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 DALRD3Q5D0E6 543 aaKnown RBP10.24□□□□□ -0.77
SURF1-204ENST00000495952 ZNF484Q5JVG2 852 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 CELF3Q5SZQ8 465 aaKnown RBP10.24□□□□□ -0.77
SURF1-204ENST00000495952 MTDHQ86UE4 582 aaKnown RBP10.24□□□□□ -0.77
SURF1-204ENST00000495952 CCNJLQ8IV13 435 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 HACE1Q8IYU2 909 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 FAM71DQ8N9W8 422 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 GSDMBQ8TAX9 411 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 HSPH1Q92598 858 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 MCUR1Q96AQ8 359 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 OXNAD1Q96HP4 312 aaPredicted RBP10.24□□□□□ -0.77
SURF1-204ENST00000495952 SERAC1Q96JX3 654 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 SRPK1Q96SB4 655 aaKnown RBP10.24□□□□□ -0.77
SURF1-204ENST00000495952 MIPEPQ99797 713 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 CCDC28BQ9BUN5 200 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 CALN1Q9BXU9 219 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 CADM1Q9BY67 442 aaKnown RBP10.24□□□□□ -0.77
SURF1-204ENST00000495952 ELOVL4Q9GZR5 314 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 C1orf21Q9H246 121 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 KCNK13Q9HB14 408 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 USP29Q9HBJ7 922 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.24□□□□□ -0.77
SURF1-204ENST00000495952 ETNK2Q9NVF9 386 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.24□□□□□ -0.77
SURF1-204ENST00000495952 ZFATQ9P243 1243 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 STX18Q9P2W9 335 aaKnown RBP10.24□□□□□ -0.77
SURF1-204ENST00000495952 NXF1Q9UBU9 619 aaKnown RBP10.24□□□□□ -0.77
SURF1-204ENST00000495952 ZNF212Q9UDV6 495 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 BARX2Q9UMQ3 279 aaPredicted RBP10.24□□□□□ -0.77
SURF1-204ENST00000495952 LRCH1Q9Y2L9 728 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 DERAQ9Y315 318 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 PLLPQ9Y342 182 aa10.24□□□□□ -0.77
SURF1-204ENST00000495952 SF3B1O75533 1304 aaKnown RBP eCLIP10.24□□□□□ -0.77
SURF1-204ENST00000495952 HACD1B0YJ81 288 aa10.23□□□□□ -0.77
SURF1-204ENST00000495952 TRIM49D1C9J1S8 452 aa10.23□□□□□ -0.77
SURF1-204ENST00000495952 H7C0C1 242 aa10.23□□□□□ -0.77
SURF1-204ENST00000495952 NOP56O00567 594 aaKnown RBP10.23□□□□□ -0.77
SURF1-204ENST00000495952 NVLO15381 856 aaKnown RBP10.23□□□□□ -0.77
SURF1-204ENST00000495952 GYG2O15488 501 aa10.23□□□□□ -0.77
SURF1-204ENST00000495952 NFICP08651 508 aa10.23□□□□□ -0.77
SURF1-204ENST00000495952 CXCL8P10145 99 aa10.23□□□□□ -0.77
SURF1-204ENST00000495952 CYP2C8P10632 490 aa10.23□□□□□ -0.77
SURF1-204ENST00000495952 RARBP10826 455 aa10.23□□□□□ -0.77
SURF1-204ENST00000495952 ESRRAP11474 423 aaPredicted RBP10.23□□□□□ -0.77
SURF1-204ENST00000495952 NEFHP12036 1026 aa10.23□□□□□ -0.77
SURF1-204ENST00000495952 GM2AP17900 193 aa10.23□□□□□ -0.77
SURF1-204ENST00000495952 ATP5OP48047 213 aa10.23□□□□□ -0.77
SURF1-204ENST00000495952 NR2C2P49116 596 aa10.23□□□□□ -0.77
SURF1-204ENST00000495952 ZBTB16Q05516 673 aa10.23□□□□□ -0.77
SURF1-204ENST00000495952 KRT81Q14533 505 aa10.23□□□□□ -0.77
SURF1-204ENST00000495952 GSTA3Q16772 222 aa10.23□□□□□ -0.77
SURF1-204ENST00000495952 TRMT5Q32P41 509 aaKnown RBP10.23□□□□□ -0.77
SURF1-204ENST00000495952 KCNT1Q5JUK3 1230 aa10.23□□□□□ -0.77
SURF1-204ENST00000495952 HP1BP3Q5SSJ5 553 aaPredicted RBP10.23□□□□□ -0.77
SURF1-204ENST00000495952 EEF1DP3Q658K8 133 aa10.23□□□□□ -0.77
SURF1-204ENST00000495952 STEAP4Q687X5 459 aa10.23□□□□□ -0.77
SURF1-204ENST00000495952 CAPRIN2Q6IMN6 1127 aaKnown RBP10.23□□□□□ -0.77
SURF1-204ENST00000495952 KYAT3Q6YP21 454 aaKnown RBP10.23□□□□□ -0.77
SURF1-204ENST00000495952 MARK2Q7KZI7 788 aaKnown RBP10.23□□□□□ -0.77
SURF1-204ENST00000495952 SESTD1Q86VW0 696 aa10.23□□□□□ -0.77
SURF1-204ENST00000495952 TMPRSS6Q8IU80 811 aa10.23□□□□□ -0.77
SURF1-204ENST00000495952 EMC1Q8N766 993 aa10.23□□□□□ -0.77
SURF1-204ENST00000495952 LINC01465Q8N7H1 131 aa10.23□□□□□ -0.77
SURF1-204ENST00000495952 CCDC110Q8TBZ0 833 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms