RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 YWHAGP61981 247 aaKnown RBP eCLIP12.7□□□□□ -0.38
CSNK1E-213ENST00000495232 ZXDAP98168 799 aa12.7□□□□□ -0.38
CSNK1E-213ENST00000495232 PFKPQ01813 784 aa12.7□□□□□ -0.38
CSNK1E-213ENST00000495232 GOLGA8FQ08AF8 430 aa12.7□□□□□ -0.38
CSNK1E-213ENST00000495232 GOLGA8DPQ0D2H9 430 aa12.7□□□□□ -0.38
CSNK1E-213ENST00000495232 GRM2Q14416 872 aa12.7□□□□□ -0.38
CSNK1E-213ENST00000495232 ZNF268Q14587 947 aaPredicted RBP12.7□□□□□ -0.38
CSNK1E-213ENST00000495232 BTBD8Q5XKL5 378 aa12.7□□□□□ -0.38
CSNK1E-213ENST00000495232 VITQ6UXI7 678 aa12.7□□□□□ -0.38
CSNK1E-213ENST00000495232 TMEM35BQ8NCS4 154 aa12.7□□□□□ -0.38
CSNK1E-213ENST00000495232 MSANTD4Q8NCY6 345 aa12.7□□□□□ -0.38
CSNK1E-213ENST00000495232 BPIFB1Q8TDL5 484 aa12.7□□□□□ -0.38
CSNK1E-213ENST00000495232 EPS8L1Q8TE68 723 aa12.7□□□□□ -0.38
CSNK1E-213ENST00000495232 EDAQ92838 391 aa12.7□□□□□ -0.38
CSNK1E-213ENST00000495232 USP13Q92995 863 aaPredicted RBP12.7□□□□□ -0.38
CSNK1E-213ENST00000495232 RPP25Q9BUL9 199 aaKnown RBP12.7□□□□□ -0.38
CSNK1E-213ENST00000495232 PLA2G2FQ9BZM2 168 aa12.7□□□□□ -0.38
CSNK1E-213ENST00000495232 EDEM3Q9BZQ6 932 aa12.7□□□□□ -0.38
CSNK1E-213ENST00000495232 XPO4Q9C0E2 1151 aaKnown RBP12.7□□□□□ -0.38
CSNK1E-213ENST00000495232 CCSER2Q9H7U1 834 aa12.7□□□□□ -0.38
CSNK1E-213ENST00000495232 BRD9Q9H8M2 597 aa12.7□□□□□ -0.38
CSNK1E-213ENST00000495232 CYLDQ9NQC7 956 aa12.7□□□□□ -0.38
CSNK1E-213ENST00000495232 FBXL21Q9UKT6 434 aa12.7□□□□□ -0.38
CSNK1E-213ENST00000495232 MYO6Q9UM54 1294 aa12.7□□□□□ -0.38
CSNK1E-213ENST00000495232 NCOR1O75376 2440 aa12.7□□□□□ -0.38
CSNK1E-213ENST00000495232 TRIOO75962 3097 aa12.7□□□□□ -0.38
CSNK1E-213ENST00000495232 COCHO43405 550 aa12.69□□□□□ -0.38
CSNK1E-213ENST00000495232 PRAMEF12O95522 483 aa12.69□□□□□ -0.38
CSNK1E-213ENST00000495232 CFHP08603 1231 aa12.69□□□□□ -0.38
CSNK1E-213ENST00000495232 GDI1P31150 447 aa12.69□□□□□ -0.38
CSNK1E-213ENST00000495232 SLC7A9P82251 487 aa12.69□□□□□ -0.38
CSNK1E-213ENST00000495232 PDCLQ13371 301 aa12.69□□□□□ -0.38
CSNK1E-213ENST00000495232 FIGNQ5HY92 759 aa12.69□□□□□ -0.38
CSNK1E-213ENST00000495232 C10orf120Q5SQS8 335 aa12.69□□□□□ -0.38
CSNK1E-213ENST00000495232 PM20D1Q6GTS8 502 aa12.69□□□□□ -0.38
CSNK1E-213ENST00000495232 RSRC2Q7L4I2 434 aaKnown RBP12.69□□□□□ -0.38
CSNK1E-213ENST00000495232 NOP9Q86U38 636 aaKnown RBP12.69□□□□□ -0.38
CSNK1E-213ENST00000495232 DDX42Q86XP3 938 aaKnown RBP eCLIP12.69□□□□□ -0.38
CSNK1E-213ENST00000495232 IPO4Q8TEX9 1081 aaKnown RBP12.69□□□□□ -0.38
CSNK1E-213ENST00000495232 RNF139Q8WU17 664 aa12.69□□□□□ -0.38
CSNK1E-213ENST00000495232 IRGQQ8WZA9 623 aa12.69□□□□□ -0.38
CSNK1E-213ENST00000495232 IRF7Q92985 503 aa12.69□□□□□ -0.38
CSNK1E-213ENST00000495232 PPP1R13BQ96KQ4 1090 aa12.69□□□□□ -0.38
CSNK1E-213ENST00000495232 SLC22A12Q96S37 553 aa12.69□□□□□ -0.38
CSNK1E-213ENST00000495232 MIS12Q9H081 205 aa12.69□□□□□ -0.38
CSNK1E-213ENST00000495232 RNF38Q9H0F5 515 aa12.69□□□□□ -0.38
CSNK1E-213ENST00000495232 NUCKS1Q9H1E3 243 aaKnown RBP12.69□□□□□ -0.38
CSNK1E-213ENST00000495232 SEPT11Q9NVA2 429 aaKnown RBP12.69□□□□□ -0.38
CSNK1E-213ENST00000495232 CLIC5Q9NZA1 410 aa12.69□□□□□ -0.38
CSNK1E-213ENST00000495232 ARHGAP26Q9UNA1 814 aa12.69□□□□□ -0.38
CSNK1E-213ENST00000495232 CCL26Q9Y258 94 aa12.69□□□□□ -0.38
CSNK1E-213ENST00000495232 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.69□□□□□ -0.38
CSNK1E-213ENST00000495232 CPQQ9Y646 472 aa12.69□□□□□ -0.38
CSNK1E-213ENST00000495232 TTC28Q96AY4 2481 aa12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 LRRC53A6NM62 1247 aa12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 NARSO43776 548 aaKnown RBP12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 LSM8O95777 96 aaKnown RBP12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 MMEP08473 750 aa12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 TPM1P09493 284 aa12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 DAOAP59103 153 aa12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 GPC5P78333 572 aa12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 CDR2Q01850 454 aa12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 ASIC2Q16515 512 aa12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 ARHGAP29Q52LW3 1261 aa12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 SFMBT2Q5VUG0 894 aa12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 TRIM72Q6ZMU5 477 aa12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 SCUBE3Q8IX30 993 aa12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 SCML4Q8N228 414 aa12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 C1orf131Q8NDD1 294 aaKnown RBP12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 CSGALNACT1Q8TDX6 532 aa12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 SH3RF2Q8TEC5 729 aa12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 KHSRPQ92945 711 aaKnown RBP eCLIP12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 TRIM62Q9BVG3 475 aa12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 SLC4A5Q9BY07 1137 aa12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 TRIM5Q9C035 493 aa12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 SMOC2Q9H3U7 446 aa12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 NMUR1Q9HB89 426 aa12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 SLC2A4RGQ9NR83 387 aa12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 ABCC13Q9NSE7 274 aa12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 OLA1Q9NTK5 396 aaKnown RBP12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 SMPD4Q9NXE4 827 aa12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 DNMT3LQ9UJW3 386 aa12.68□□□□□ -0.38
CSNK1E-213ENST00000495232 YJEFN3A6XGL0 299 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 E5RJQ4 531 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 E7ENQ6 273 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 LEFTY2O00292 366 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 CAPN9O14815 690 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 CHADO15335 359 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 OLFM2O95897 454 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 TBX18O95935 607 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 PBX1P40424 430 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 RPL34P49207 117 aaKnown RBP12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 PGFP49763 221 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 SIGLEC14Q08ET2 396 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 FCHO2Q0JRZ9 810 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 MTF1Q14872 753 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 BSPRYQ5W0U4 402 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 SPECC1LQ69YQ0 1117 aa12.67□□□□□ -0.38
CSNK1E-213ENST00000495232 KLHDC10Q6PID8 442 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms