RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 TEAD4Q15561 434 aa9.56□□□□□ -0.88
GARNL3-219ENST00000495172 TRMT11Q7Z4G4 463 aaKnown RBP9.56□□□□□ -0.88
GARNL3-219ENST00000495172 ADAT2Q7Z6V5 191 aaKnown RBP9.56□□□□□ -0.88
GARNL3-219ENST00000495172 TMEM25Q86YD3 366 aa9.56□□□□□ -0.88
GARNL3-219ENST00000495172 DEPTORQ8TB45 409 aa9.56□□□□□ -0.88
GARNL3-219ENST00000495172 ZNF564Q8TBZ8 553 aaPredicted RBP9.56□□□□□ -0.88
GARNL3-219ENST00000495172 HTR3CQ8WXA8 447 aa9.56□□□□□ -0.88
GARNL3-219ENST00000495172 BIRC7Q96CA5 298 aa9.56□□□□□ -0.88
GARNL3-219ENST00000495172 PRR11Q96HE9 360 aaPredicted RBP9.56□□□□□ -0.88
GARNL3-219ENST00000495172 SLC6A18Q96N87 628 aa9.56□□□□□ -0.88
GARNL3-219ENST00000495172 ELF4Q99607 663 aaPredicted RBP9.56□□□□□ -0.88
GARNL3-219ENST00000495172 EIF2AK1Q9BQI3 630 aaKnown RBP9.56□□□□□ -0.88
GARNL3-219ENST00000495172 ORAI3Q9BRQ5 295 aa9.56□□□□□ -0.88
GARNL3-219ENST00000495172 TARS2Q9BW92 718 aaKnown RBP9.56□□□□□ -0.88
GARNL3-219ENST00000495172 RBM28Q9NW13 759 aaKnown RBP9.56□□□□□ -0.88
GARNL3-219ENST00000495172 ADAMTS1Q9UHI8 967 aa9.56□□□□□ -0.88
GARNL3-219ENST00000495172 NAP1L2Q9ULW6 460 aaPredicted RBP9.56□□□□□ -0.88
GARNL3-219ENST00000495172 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.56□□□□□ -0.88
GARNL3-219ENST00000495172 RBM8AQ9Y5S9 174 aaKnown RBP9.56□□□□□ -0.88
GARNL3-219ENST00000495172 CPQQ9Y646 472 aa9.56□□□□□ -0.88
GARNL3-219ENST00000495172 PRRC2CQ9Y520 2896 aaKnown RBP9.56□□□□□ -0.88
GARNL3-219ENST00000495172 TACC2O95359 2948 aa9.55□□□□□ -0.88
GARNL3-219ENST00000495172 ANKHD1Q8IWZ3 2542 aaKnown RBP9.55□□□□□ -0.88
GARNL3-219ENST00000495172 ZBTB43O43298 467 aa9.55□□□□□ -0.88
GARNL3-219ENST00000495172 SDC3O75056 442 aa9.55□□□□□ -0.88
GARNL3-219ENST00000495172 NOL4O94818 638 aa9.55□□□□□ -0.88
GARNL3-219ENST00000495172 CLDN1O95832 211 aa9.55□□□□□ -0.88
GARNL3-219ENST00000495172 ADH1CP00326 375 aa9.55□□□□□ -0.88
GARNL3-219ENST00000495172 CSH1P0DML2 217 aa9.55□□□□□ -0.88
GARNL3-219ENST00000495172 CSH2P0DML3 217 aa9.55□□□□□ -0.88
GARNL3-219ENST00000495172 CXCL8P10145 99 aa9.55□□□□□ -0.88
GARNL3-219ENST00000495172 PRF1P14222 555 aa9.55□□□□□ -0.88
GARNL3-219ENST00000495172 CKMT2P17540 419 aa9.55□□□□□ -0.88
GARNL3-219ENST00000495172 ANO4Q32M45 955 aa9.55□□□□□ -0.88
GARNL3-219ENST00000495172 C1QL3Q5VWW1 255 aa9.55□□□□□ -0.88
GARNL3-219ENST00000495172 PPP4R3AQ6IN85 833 aa9.55□□□□□ -0.88
GARNL3-219ENST00000495172 SDE2Q6IQ49 451 aa9.55□□□□□ -0.88
GARNL3-219ENST00000495172 B4GALNT3Q6L9W6 998 aa9.55□□□□□ -0.88
GARNL3-219ENST00000495172 VASH2Q86V25 355 aa9.55□□□□□ -0.88
GARNL3-219ENST00000495172 SGF29Q96ES7 293 aa9.55□□□□□ -0.88
GARNL3-219ENST00000495172 CCDC43Q96MW1 224 aaKnown RBP9.55□□□□□ -0.88
GARNL3-219ENST00000495172 SEMA3CQ99985 751 aa9.55□□□□□ -0.88
GARNL3-219ENST00000495172 PTPRHQ9HD43 1115 aa9.55□□□□□ -0.88
GARNL3-219ENST00000495172 KCNMB3Q9NPA1 279 aa9.55□□□□□ -0.88
GARNL3-219ENST00000495172 DEC1Q9P2X7 70 aa9.55□□□□□ -0.88
GARNL3-219ENST00000495172 HSFX1Q9UBD0 423 aa9.55□□□□□ -0.88
GARNL3-219ENST00000495172 TCHHQ07283 1943 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 ABCA2Q9BZC7 2435 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 CCDC168Q8NDH2 2452 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 WIPF3A6NGB9 483 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.54□□□□□ -0.88
GARNL3-219ENST00000495172 TRIM38O00635 465 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 ABLIM1O14639 778 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 HCRTO43612 131 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 NFICP08651 508 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 CDK4P11802 303 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 TCF3P15923 654 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 TYMPP19971 482 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 GNA11P29992 359 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 CASRP41180 1078 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 USP46P62068 366 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 CDCP2Q5VXM1 449 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 PADI6Q6TGC4 694 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 SYNE3Q6ZMZ3 975 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 TAS1R3Q7RTX0 852 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 TMPRSS6Q8IU80 811 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 LSMEM2Q8N112 164 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 BHMTQ93088 406 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 SIPA1Q96FS4 1042 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 P2RY11Q96G91 374 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 ATXN7L3BQ96GX2 97 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 SLC46A1Q96NT5 459 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 ACO2Q99798 780 aaKnown RBP9.54□□□□□ -0.88
GARNL3-219ENST00000495172 GZF1Q9H116 711 aaPredicted RBP9.54□□□□□ -0.88
GARNL3-219ENST00000495172 C2orf40Q9H1Z8 148 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 EBF2Q9HAK2 575 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 ZNF71Q9NQZ8 489 aaPredicted RBP9.54□□□□□ -0.88
GARNL3-219ENST00000495172 DNAJC17Q9NVM6 304 aaKnown RBP9.54□□□□□ -0.88
GARNL3-219ENST00000495172 TNFSF13BQ9Y275 285 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 STON1Q9Y6Q2 735 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 MYH10P35580 1976 aa9.54□□□□□ -0.88
GARNL3-219ENST00000495172 SIGLEC6O43699 453 aa9.53□□□□□ -0.88
GARNL3-219ENST00000495172 OPA1O60313 960 aa9.53□□□□□ -0.88
GARNL3-219ENST00000495172 NOBOXO60393 691 aa9.53□□□□□ -0.88
GARNL3-219ENST00000495172 ODC1P11926 461 aa9.53□□□□□ -0.88
GARNL3-219ENST00000495172 RARGP13631 454 aa9.53□□□□□ -0.88
GARNL3-219ENST00000495172 EPHA8P29322 1005 aaPredicted RBP9.53□□□□□ -0.88
GARNL3-219ENST00000495172 RBMS1P29558 406 aaKnown RBP9.53□□□□□ -0.88
GARNL3-219ENST00000495172 LRPAP1P30533 357 aa9.53□□□□□ -0.88
GARNL3-219ENST00000495172 COPAP53621 1224 aa9.53□□□□□ -0.88
GARNL3-219ENST00000495172 MLLT10P55197 1068 aa9.53□□□□□ -0.88
GARNL3-219ENST00000495172 C21orf59P57076 290 aa9.53□□□□□ -0.88
GARNL3-219ENST00000495172 NLRP5P59047 1200 aa9.53□□□□□ -0.88
GARNL3-219ENST00000495172 LILRA4P59901 499 aa9.53□□□□□ -0.88
GARNL3-219ENST00000495172 PROX2Q3B8N5 592 aa9.53□□□□□ -0.88
GARNL3-219ENST00000495172 SGO2Q562F6 1265 aa9.53□□□□□ -0.88
GARNL3-219ENST00000495172 WSCD1Q658N2 575 aa9.53□□□□□ -0.88
GARNL3-219ENST00000495172 KANSL1Q7Z3B3 1105 aa9.53□□□□□ -0.88
GARNL3-219ENST00000495172 TMC6Q7Z403 805 aa9.53□□□□□ -0.88
GARNL3-219ENST00000495172 BBS7Q8IWZ6 715 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms