RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 TRIM71Q2Q1W2 868 aaKnown RBP4.19□□□□□ -1.74
ATG3-207ENST00000494571 LETM2Q2VYF4 491 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 AKAP4Q5JQC9 854 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 AARS2Q5JTZ9 985 aaKnown RBP4.19□□□□□ -1.74
ATG3-207ENST00000494571 EFHC1Q5JVL4 640 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 SCARA3Q6AZY7 606 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 METTL2BQ6P1Q9 378 aaKnown RBP4.19□□□□□ -1.74
ATG3-207ENST00000494571 ZDHHC24Q6UX98 284 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 RELL1Q8IUW5 271 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 THNSL1Q8IYQ7 743 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 BEND7Q8N7W2 519 aaPredicted RBP4.19□□□□□ -1.74
ATG3-207ENST00000494571 TTC13Q8NBP0 860 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 TP53I13Q8NBR0 393 aaPredicted RBP4.19□□□□□ -1.74
ATG3-207ENST00000494571 DMRTB1Q96MA1 342 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 NLRP4Q96MN2 994 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 OLFM1Q99784 485 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 USB1Q9BQ65 265 aaKnown RBP4.19□□□□□ -1.74
ATG3-207ENST00000494571 TRIM56Q9BRZ2 755 aaKnown RBP4.19□□□□□ -1.74
ATG3-207ENST00000494571 TMEM120AQ9BXJ8 343 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 OSBPL8Q9BZF1 889 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 NMUR2Q9GZQ4 415 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 HOXD1Q9GZZ0 328 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 DNAJC18Q9H819 358 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 KANSL2Q9H9L4 492 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 VPS45Q9NRW7 570 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 DNAJC28Q9NX36 388 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 PCSK1NQ9UHG2 260 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 CYB5R1Q9UHQ9 305 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 GRID1Q9ULK0 1009 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 VPS4AQ9UN37 437 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 PCDHA12Q9UN75 941 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 NAALADL1Q9UQQ1 740 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 NR2E3Q9Y5X4 410 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 CPQQ9Y646 472 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 PMF1-BGLAPU3KQ54 211 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 CPSF1Q10570 1443 aaKnown RBP4.19□□□□□ -1.74
ATG3-207ENST00000494571 LRP6O75581 1613 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 GAKO14976 1311 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 WDR19Q8NEZ3 1342 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 TRAV6A0A075B6T7 132 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 ANKRD63C9JTQ0 380 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 E9PMD0 336 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 F8W8V4 182 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 C2CD2LO14523 706 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 GPC4O75487 556 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 IDH1O75874 414 aaKnown RBP4.19□□□□□ -1.74
ATG3-207ENST00000494571 CAMTA2O94983 1202 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 OR5F1O95221 314 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 BMP15O95972 392 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 CLEC2LP0C7M8 214 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 KITP10721 976 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 ITGAXP20702 1163 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 MAP4P27816 1152 aaKnown RBP4.19□□□□□ -1.74
ATG3-207ENST00000494571 LRPAP1P30533 357 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 RPA3P35244 121 aaPredicted RBP4.19□□□□□ -1.74
ATG3-207ENST00000494571 SLC26A3P40879 764 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 NAMPTP43490 491 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 NR2C2P49116 596 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 BLVRAP53004 296 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 RCAN1P53805 252 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 ALDH18A1P54886 795 aaKnown RBP4.19□□□□□ -1.74
ATG3-207ENST00000494571 POLR2GP62487 172 aaKnown RBP eCLIP4.19□□□□□ -1.74
ATG3-207ENST00000494571 LRRC63Q05C16 580 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 FCHO2Q0JRZ9 810 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 HSPA14Q0VDF9 509 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 HIC1Q14526 733 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 TOMM20Q15388 145 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 ZNF658Q5TYW1 1059 aaPredicted RBP4.19□□□□□ -1.74
ATG3-207ENST00000494571 DUPD1Q68J44 220 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 APOA5Q6Q788 366 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 BTNL9Q6UXG8 535 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 DTHD1Q6ZMT9 781 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 TMEM26Q6ZUK4 368 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 KCTD20Q7Z5Y7 419 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 CCDC105Q8IYK2 499 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 ANKRD35Q8N283 1001 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 NCOA7Q8NI08 942 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 SEPT1Q8WYJ6 367 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 CFAP36Q96G28 342 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 C9orf72Q96LT7 481 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 LRGUKQ96M69 825 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 RANBP9Q96S59 729 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 POP1Q99575 1024 aaKnown RBP4.19□□□□□ -1.74
ATG3-207ENST00000494571 KLF6Q99612 283 aaPredicted RBP4.19□□□□□ -1.74
ATG3-207ENST00000494571 CHID1Q9BWS9 393 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 IDI2Q9BXS1 227 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 NAA50Q9GZZ1 169 aaKnown RBP4.19□□□□□ -1.74
ATG3-207ENST00000494571 KLC2Q9H0B6 622 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 AVENQ9NQS1 362 aaPredicted RBP4.19□□□□□ -1.74
ATG3-207ENST00000494571 ARMC1Q9NVT9 282 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 ZDHHC7Q9NXF8 308 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 ANKFY1Q9P2R3 1169 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 MARCOQ9UEW3 520 aaPredicted RBP4.19□□□□□ -1.74
ATG3-207ENST00000494571 DENND2AQ9ULE3 1009 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 GNEQ9Y223 722 aaKnown RBP4.19□□□□□ -1.74
ATG3-207ENST00000494571 MAN2B2Q9Y2E5 1009 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 SLC27A5Q9Y2P5 690 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 SRPRBQ9Y5M8 271 aaKnown RBP4.19□□□□□ -1.74
ATG3-207ENST00000494571 DGKBQ9Y6T7 804 aa4.19□□□□□ -1.74
ATG3-207ENST00000494571 A0A1W2PP64 1363 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms