RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 DTNAQ9Y4J8 743 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 GHRP10912 638 aa19.77■□□□□ 0.76
COL27A1-207ENST00000494090 RANBP1P43487 201 aa19.77■□□□□ 0.76
COL27A1-207ENST00000494090 NFE2Q16621 373 aaPredicted RBP19.77■□□□□ 0.76
COL27A1-207ENST00000494090 CDK5RAP1Q96SZ6 601 aaKnown RBP19.77■□□□□ 0.76
COL27A1-207ENST00000494090 TLR10Q9BXR5 811 aa19.77■□□□□ 0.76
COL27A1-207ENST00000494090 ENO4A6NNW6 628 aa19.77■□□□□ 0.76
COL27A1-207ENST00000494090 RIPK2O43353 540 aa19.77■□□□□ 0.76
COL27A1-207ENST00000494090 HNRNPCP07910 306 aaKnown RBP eCLIP19.77■□□□□ 0.767e-10■□□□□ 9.4
COL27A1-207ENST00000494090 VCLP18206 1134 aa19.77■□□□□ 0.76
COL27A1-207ENST00000494090 BLVRAP53004 296 aa19.77■□□□□ 0.76
COL27A1-207ENST00000494090 TGFB2P61812 414 aa19.77■□□□□ 0.76
COL27A1-207ENST00000494090 ADCK1Q86TW2 530 aa19.77■□□□□ 0.76
COL27A1-207ENST00000494090 MCOLN2Q8IZK6 566 aa19.77■□□□□ 0.76
COL27A1-207ENST00000494090 SEMA4AQ9H3S1 761 aa19.77■□□□□ 0.76
COL27A1-207ENST00000494090 CISHQ9NSE2 258 aa19.77■□□□□ 0.76
COL27A1-207ENST00000494090 IPPQ9Y573 584 aa19.77■□□□□ 0.76
COL27A1-207ENST00000494090 ADGRA2Q96PE1 1338 aa19.77■□□□□ 0.76
COL27A1-207ENST00000494090 LOC102724159A0A0B4J2E5 919 aa19.77■□□□□ 0.76
COL27A1-207ENST00000494090 ALOX15P16050 662 aaPredicted RBP19.77■□□□□ 0.76
COL27A1-207ENST00000494090 PTPN7P35236 360 aa19.77■□□□□ 0.76
COL27A1-207ENST00000494090 PWP2Q15269 919 aaKnown RBP19.77■□□□□ 0.76
COL27A1-207ENST00000494090 KHDRBS2Q5VWX1 349 aaKnown RBP19.77■□□□□ 0.76
COL27A1-207ENST00000494090 ACOT1Q86TX2 421 aa19.77■□□□□ 0.76
COL27A1-207ENST00000494090 DNERQ8NFT8 737 aa19.77■□□□□ 0.76
COL27A1-207ENST00000494090 AENQ8WTP8 325 aaKnown RBP19.77■□□□□ 0.76
COL27A1-207ENST00000494090 PREX1Q8TCU6 1659 aa19.77■□□□□ 0.76
COL27A1-207ENST00000494090 CYB561D2O14569 222 aa19.77■□□□□ 0.75
COL27A1-207ENST00000494090 RNASEH1O60930 286 aaKnown RBP19.77■□□□□ 0.75
COL27A1-207ENST00000494090 URODP06132 367 aa19.77■□□□□ 0.75
COL27A1-207ENST00000494090 CAPZA2P47755 286 aa19.77■□□□□ 0.75
COL27A1-207ENST00000494090 RUNX1T1Q06455 604 aa19.77■□□□□ 0.75
COL27A1-207ENST00000494090 OPTNQ96CV9 577 aa19.77■□□□□ 0.75
COL27A1-207ENST00000494090 PCDH9Q9HC56 1237 aa19.77■□□□□ 0.75
COL27A1-207ENST00000494090 PMPCBO75439 489 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 MZF1P28698 734 aaPredicted RBP19.76■□□□□ 0.75
COL27A1-207ENST00000494090 S100A5P33763 92 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 OXCT1P55809 520 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 ORC1Q13415 861 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 CCDC85BQ15834 202 aaPredicted RBP19.76■□□□□ 0.75
COL27A1-207ENST00000494090 SH3RF1Q7Z6J0 888 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 SCUBE1Q8IWY4 988 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 ADGRF2Q8IZF7 708 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 LRRN4CLQ8ND94 238 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 DCLK3Q9C098 648 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 ASCC2Q9H1I8 757 aaPredicted RBP19.76■□□□□ 0.75
COL27A1-207ENST00000494090 RXFP1Q9HBX9 757 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 TMEM51Q9NW97 253 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 LAYNQ6UX15 382 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 SLFN11Q7Z7L1 901 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 ZFYVE19Q96K21 471 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 GDF3Q9NR23 364 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 SPASTQ9UBP0 616 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 LRRC10BA6NIK2 292 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 SOAT1P35610 550 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 CNDP1Q96KN2 507 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 SCAF8Q9UPN6 1271 aaKnown RBP19.76■□□□□ 0.75
COL27A1-207ENST00000494090 ZNF280DQ6N043 979 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 TMC3Q7Z5M5 1100 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 PLD3Q8IV08 490 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 DCLRE1BQ9H816 532 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 TBC1D23Q9NUY8 699 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 TUBGCP4Q9UGJ1 667 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 ZNF229Q9UJW7 825 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 SHOC2Q9UQ13 582 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 NAALADL1Q9UQQ1 740 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 ZNF711Q9Y462 761 aa19.76■□□□□ 0.75
COL27A1-207ENST00000494090 FAM237AA0A1B0GTK4 181 aa19.75■□□□□ 0.75
COL27A1-207ENST00000494090 DDTLA6NHG4 134 aaPredicted RBP19.75■□□□□ 0.75
COL27A1-207ENST00000494090 MBL2P11226 248 aaPredicted RBP19.75■□□□□ 0.75
COL27A1-207ENST00000494090 CNTN1Q12860 1018 aa19.75■□□□□ 0.75
COL27A1-207ENST00000494090 DENND1BQ6P3S1 775 aa19.75■□□□□ 0.75
COL27A1-207ENST00000494090 TMEM176AQ96HP8 235 aa19.75■□□□□ 0.75
COL27A1-207ENST00000494090 EFCAB1Q9HAE3 211 aa19.75■□□□□ 0.75
COL27A1-207ENST00000494090 IL1RL2Q9HB29 575 aa19.75■□□□□ 0.75
COL27A1-207ENST00000494090 PLOD1Q02809 727 aaPredicted RBP19.75■□□□□ 0.75
COL27A1-207ENST00000494090 SGF29Q96ES7 293 aa19.75■□□□□ 0.75
COL27A1-207ENST00000494090 ZC4H2Q9NQZ6 224 aa19.75■□□□□ 0.75
COL27A1-207ENST00000494090 C6orf203Q9P0P8 240 aaPredicted RBP19.75■□□□□ 0.75
COL27A1-207ENST00000494090 TAGLN3Q9UI15 199 aa19.75■□□□□ 0.75
COL27A1-207ENST00000494090 AK9Q5TCS8 1911 aa19.75■□□□□ 0.75
COL27A1-207ENST00000494090 THP07101 528 aa19.75■□□□□ 0.75
COL27A1-207ENST00000494090 ITGALP20701 1170 aa19.75■□□□□ 0.75
COL27A1-207ENST00000494090 MYL6P60660 151 aa19.75■□□□□ 0.75
COL27A1-207ENST00000494090 SYTL5Q8TDW5 730 aaPredicted RBP19.75■□□□□ 0.75
COL27A1-207ENST00000494090 ZKSCAN4Q969J2 545 aaPredicted RBP19.75■□□□□ 0.75
COL27A1-207ENST00000494090 ZMAT2Q96NC0 199 aaKnown RBP19.75■□□□□ 0.75
COL27A1-207ENST00000494090 KLK14Q9P0G3 267 aa19.75■□□□□ 0.75
COL27A1-207ENST00000494090 DDX20Q9UHI6 824 aaKnown RBP19.75■□□□□ 0.75
COL27A1-207ENST00000494090 GRK2P25098 689 aa19.75■□□□□ 0.75
COL27A1-207ENST00000494090 RAB27AP51159 221 aa19.75■□□□□ 0.75
COL27A1-207ENST00000494090 SLC35C1Q96A29 364 aa19.75■□□□□ 0.75
COL27A1-207ENST00000494090 ADGRB2O60241 1585 aa19.75■□□□□ 0.75
COL27A1-207ENST00000494090 NEURL4Q96JN8 1562 aa19.75■□□□□ 0.75
COL27A1-207ENST00000494090 NCAM2O15394 837 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 WDR47O94967 919 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 TGFB3P10600 412 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 GYS1P13807 737 aa19.74■□□□□ 0.75
COL27A1-207ENST00000494090 CYLC2Q14093 348 aaPredicted RBP19.74■□□□□ 0.75
COL27A1-207ENST00000494090 PDCD2LQ9BRP1 358 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms