RNA–Protein interactions for RNA: ENST00000494065.2

DEPDC5-220, Transcript of DEP domain containing 5, humanhuman

TSL 3

Gene DEPDC5, Length 414 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-220ENST00000494065 FAM163BP0C2L3 166 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 USP17L7P0C7H9 530 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 CHRNB1P11230 501 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 TDGF1P13385 188 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 TNNI1P19237 187 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 CYP2F1P24903 491 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 ATICP31939 592 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 HOXD13P35453 343 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 ID4P47928 161 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 CXCL12P48061 93 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 SOX9P48436 509 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 GPR15P49685 360 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 AP3M2P53677 418 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 PSMC1P62191 440 aaKnown RBP8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 FAM160A1Q05DH4 1040 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 TYRO3Q06418 890 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 FZD5Q13467 585 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 TRPC3Q13507 836 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 KCNB1Q14721 858 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 MTF1Q14872 753 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 OCLNQ16625 522 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 SOWAHAQ2M3V2 549 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 TRAPPC11Q7Z392 1133 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 LIMS2Q7Z4I7 341 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 TMEM150AQ86TG1 271 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 SCN4BQ8IWT1 228 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 NELFCDQ8IXH7 590 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 MAB21L3Q8N8X9 362 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 SUMF1Q8NBK3 374 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 SCFD1Q8WVM8 642 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 KBTBD7Q8WVZ9 684 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 USP13Q92995 863 aaPredicted RBP8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 CCDC47Q96A33 483 aaKnown RBP8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 ZFYVE19Q96K21 471 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 FAM84AQ96KN4 292 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 SPATA17Q96L03 361 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 MMS19Q96T76 1030 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 ARID3AQ99856 593 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 FUCA2Q9BTY2 467 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 SLC46A2Q9BY10 475 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 ELOVL4Q9GZR5 314 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 NAT10Q9H0A0 1025 aaKnown RBP8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 SNX25Q9H3E2 840 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 TRPC7Q9HCX4 862 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 TDP1Q9NUW8 608 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 GTSE1Q9NYZ3 720 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 MAGEC2Q9UBF1 373 aaPredicted RBP8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 PCDHA7Q9UN72 937 aa8.57□□□□□ -1.04
DEPDC5-220ENST00000494065 PTPRDP23468 1912 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 SPTBN4Q9H254 2564 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 ZNF638Q14966 1978 aaKnown RBP8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 TGFB1I1O43294 461 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 EXOC3O60645 756 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 TACC1O75410 805 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 KIF20AO95235 890 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 SLFN14P0C7P3 912 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 P4HA1P13674 534 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 TCF3P15923 654 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 TRIM21P19474 475 aaKnown RBP8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 SDHBP21912 280 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 CNR2P34972 360 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 AFMP43652 599 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 PPP3CCP48454 512 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 IFNAR2P48551 515 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 SATB1Q01826 763 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 CYP27A1Q02318 531 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 LMNB2Q03252 620 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 TNK2Q07912 1038 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 GRSF1Q12849 480 aaKnown RBP eCLIP8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 BIRC3Q13489 604 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 RUNX3Q13761 415 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 CCINQ13939 588 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 PON2Q15165 354 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 ZNF77Q15935 545 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 STX1AQ16623 288 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 DDR2Q16832 855 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 KNOP1Q1ED39 458 aaKnown RBP8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 TBCELQ5QJ74 424 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 SDHAF4Q5VUM1 108 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 LAIR1Q6GTX8 287 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 FAM171BQ6P995 826 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 TSSK4Q6SA08 328 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 DENND5BQ6ZUT9 1274 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 KIAA2013Q8IYS2 634 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 MYCBPAPQ8TBZ2 947 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 ATP2A3Q93084 1043 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 CCDC127Q96BQ5 260 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 ZNF837Q96EG3 531 aaPredicted RBP8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 CCDC34Q96HJ3 373 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 SMG9Q9H0W8 520 aaKnown RBP8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 BLZF1Q9H2G9 400 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 CUEDC1Q9NWM3 386 aaPredicted RBP8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 GTF3C4Q9UKN8 822 aa8.56□□□□□ -1.04
DEPDC5-220ENST00000494065 CACNA1AO00555 2505 aa8.55□□□□□ -1.04
DEPDC5-220ENST00000494065 GPR179Q6PRD1 2367 aa8.55□□□□□ -1.04
DEPDC5-220ENST00000494065 CLIC2O15247 247 aa8.55□□□□□ -1.04
DEPDC5-220ENST00000494065 LRP3O75074 770 aa8.55□□□□□ -1.04
DEPDC5-220ENST00000494065 ATG13O75143 517 aa8.55□□□□□ -1.04
DEPDC5-220ENST00000494065 PHACTR2O75167 634 aa8.55□□□□□ -1.04
DEPDC5-220ENST00000494065 PFKFB1P16118 471 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms