RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-231	ENST00000494043	MAN1A1	P33908	653 aa		11.95	□□□□□ -0.5
MCF2L-231	ENST00000494043	FLT3	P36888	993 aa		11.95	□□□□□ -0.5
MCF2L-231	ENST00000494043	ZNF143	P52747	638 aa	Predicted RBP	11.95	□□□□□ -0.5
MCF2L-231	ENST00000494043	RNASE9	P60153	205 aa	Known RBP	11.95	□□□□□ -0.5
MCF2L-231	ENST00000494043	USP46	P62068	366 aa		11.95	□□□□□ -0.5
MCF2L-231	ENST00000494043	YWHAZ	P63104	245 aa	Known RBP	11.95	□□□□□ -0.5
MCF2L-231	ENST00000494043	TWF1	Q12792	350 aa		11.95	□□□□□ -0.5
MCF2L-231	ENST00000494043	PLD1	Q13393	1074 aa		11.95	□□□□□ -0.5
MCF2L-231	ENST00000494043	MTMR3	Q13615	1198 aa		11.95	□□□□□ -0.5
MCF2L-231	ENST00000494043	VEPH1	Q14D04	833 aa		11.95	□□□□□ -0.5
MCF2L-231	ENST00000494043	SYT10	Q6XYQ8	523 aa		11.95	□□□□□ -0.5
MCF2L-231	ENST00000494043	SPATA31D4	Q6ZUB0	917 aa		11.95	□□□□□ -0.5
MCF2L-231	ENST00000494043	CCDC149	Q6ZUS6	474 aa		11.95	□□□□□ -0.5
MCF2L-231	ENST00000494043	HFE2	Q6ZVN8	426 aa		11.95	□□□□□ -0.5
MCF2L-231	ENST00000494043	NIPA2	Q8N8Q9	360 aa		11.95	□□□□□ -0.5
MCF2L-231	ENST00000494043	KREMEN2	Q8NCW0	462 aa		11.95	□□□□□ -0.5
MCF2L-231	ENST00000494043	SLC7A14	Q8TBB6	771 aa		11.95	□□□□□ -0.5
MCF2L-231	ENST00000494043	FAM149B1	Q96BN6	582 aa		11.95	□□□□□ -0.5
MCF2L-231	ENST00000494043	SLC2A13	Q96QE2	648 aa		11.95	□□□□□ -0.5
MCF2L-231	ENST00000494043	TTLL2	Q9BWV7	592 aa		11.95	□□□□□ -0.5
MCF2L-231	ENST00000494043	GOLPH3	Q9H4A6	298 aa		11.95	□□□□□ -0.5
MCF2L-231	ENST00000494043	DNAI1	Q9UI46	699 aa		11.95	□□□□□ -0.5
MCF2L-231	ENST00000494043	PLXNA3	P51805	1871 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	C8A	P07357	584 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	CSH1	P0DML2	217 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	CSH2	P0DML3	217 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	PDGFRA	P16234	1089 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	COMT	P21964	271 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	PSMA2	P25787	234 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	SDC4	P31431	198 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	MATK	P42679	507 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	SLC1A1	P43005	524 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	PTPN9	P43378	593 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	EPHB3	P54753	998 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	YWHAG	P61981	247 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	PIGH	Q14442	188 aa	Predicted RBP	11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	LRIT3	Q3SXY7	679 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	RTL10	Q7L3V2	364 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	BEND5	Q7L4P6	421 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	NT5DC3	Q86UY8	548 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	CPNE8	Q86YQ8	564 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	DEFB106A	Q8N104	65 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	ARHGAP18	Q8N392	663 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	SLC22A17	Q8WUG5	538 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	RXFP2	Q8WXD0	754 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	GOLGA1	Q92805	767 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	FBXO32	Q969P5	355 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	NAPG	Q99747	312 aa	Predicted RBP	11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	CNPY3	Q9BT09	278 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	DDX23	Q9BUQ8	820 aa	Known RBP	11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	TRIM62	Q9BVG3	475 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	POPDC2	Q9HBU9	364 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	EHD2	Q9NZN4	543 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	GMIP	Q9P107	970 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	AMFR	Q9UKV5	643 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	JRKL	Q9Y4A0	524 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043	ALG6	Q9Y672	507 aa		11.94	□□□□□ -0.5
MCF2L-231	ENST00000494043		A0A1W2PQH9	124 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	CTAGE9	A4FU28	777 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	RFXAP	O00287	272 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	SPOP	O43791	374 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	FYN	P06241	537 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	HMGA1	P17096	107 aa	Known RBP	11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	CASQ1	P31415	396 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	NOS2	P35228	1153 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	ACAP1	Q15027	740 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	PTPRO	Q16827	1216 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	CCDC14	Q49A88	953 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	MEI1	Q5TIA1	1274 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	BSPRY	Q5W0U4	402 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	PEX26	Q7Z412	305 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	ADGRD2	Q7Z7M1	963 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	SCD5	Q86SK9	330 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	MON1A	Q86VX9	555 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	HDAC7	Q8WUI4	952 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	UBE2Q2	Q8WVN8	375 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	PSMG2	Q969U7	264 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	MRPL38	Q96DV4	380 aa	Known RBP	11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	TRMT2B	Q96GJ1	504 aa	Known RBP	11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	MYRFL	Q96LU7	910 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	CFAP57	Q96MR6	1250 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	SLITRK1	Q96PX8	696 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	PLEKHA4	Q9H4M7	779 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	NMUR1	Q9HB89	426 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	MAN1C1	Q9NR34	630 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	MAGED2	Q9UNF1	606 aa	Predicted RBP	11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	HYOU1	Q9Y4L1	999 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	ASB3	Q9Y575	518 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	MYO16	Q9Y6X6	1858 aa		11.93	□□□□□ -0.5
MCF2L-231	ENST00000494043	ATG2A	Q2TAZ0	1938 aa		11.92	□□□□□ -0.5
MCF2L-231	ENST00000494043	ENC1	O14682	589 aa		11.92	□□□□□ -0.5
MCF2L-231	ENST00000494043	CAPN9	O14815	690 aa		11.92	□□□□□ -0.5
MCF2L-231	ENST00000494043	PER2	O15055	1255 aa		11.92	□□□□□ -0.5
MCF2L-231	ENST00000494043	NCK2	O43639	380 aa		11.92	□□□□□ -0.5
MCF2L-231	ENST00000494043	LRCH4	O75427	683 aa		11.92	□□□□□ -0.5
MCF2L-231	ENST00000494043	ZMYND10	O75800	440 aa		11.92	□□□□□ -0.5
MCF2L-231	ENST00000494043	LRG1	P02750	347 aa		11.92	□□□□□ -0.5
MCF2L-231	ENST00000494043	ATP1A1	P05023	1023 aa	Known RBP	11.92	□□□□□ -0.5

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