RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 BBS7Q8IWZ6 715 aa18.42■□□□□ 0.54
COL9A1-210ENST00000493682 FUKQ8N0W3 1084 aa18.42■□□□□ 0.54
COL9A1-210ENST00000493682 NAT16Q8N8M0 369 aa18.42■□□□□ 0.54
COL9A1-210ENST00000493682 PARD3BQ8TEW8 1205 aa18.42■□□□□ 0.54
COL9A1-210ENST00000493682 SMARCD1Q96GM5 515 aa18.42■□□□□ 0.54
COL9A1-210ENST00000493682 TNIP3Q96KP6 325 aa18.42■□□□□ 0.54
COL9A1-210ENST00000493682 DUSP9Q99956 384 aaKnown RBP18.42■□□□□ 0.54
COL9A1-210ENST00000493682 SDCBP2Q9H190 292 aa18.42■□□□□ 0.54
COL9A1-210ENST00000493682 GMIPQ9P107 970 aa18.42■□□□□ 0.54
COL9A1-210ENST00000493682 EVLQ9UI08 416 aaPredicted RBP18.42■□□□□ 0.54
COL9A1-210ENST00000493682 MYOFQ9NZM1 2061 aa18.42■□□□□ 0.54
COL9A1-210ENST00000493682 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.41■□□□□ 0.54
COL9A1-210ENST00000493682 TCRBV21S2A2A0A5A6 115 aa18.41■□□□□ 0.54
COL9A1-210ENST00000493682 FAM92AA1XBS5 289 aa18.41■□□□□ 0.54
COL9A1-210ENST00000493682 TBC1D3BA6NDS4 549 aa18.41■□□□□ 0.54
COL9A1-210ENST00000493682 LRRIQ3A6PVS8 624 aaPredicted RBP18.41■□□□□ 0.54
COL9A1-210ENST00000493682 TULP3O75386 442 aa18.41■□□□□ 0.54
COL9A1-210ENST00000493682 AP1G2O75843 785 aa18.41■□□□□ 0.54
COL9A1-210ENST00000493682 CLSTN1O94985 981 aa18.41■□□□□ 0.54
COL9A1-210ENST00000493682 C4BPAP04003 597 aaKnown RBP18.41■□□□□ 0.54
COL9A1-210ENST00000493682 PROS1P07225 676 aa18.41■□□□□ 0.54
COL9A1-210ENST00000493682 CEACAM1P13688 526 aa18.41■□□□□ 0.54
COL9A1-210ENST00000493682 CSRP1P21291 193 aaKnown RBP18.41■□□□□ 0.54
COL9A1-210ENST00000493682 AFMP43652 599 aa18.41■□□□□ 0.54
COL9A1-210ENST00000493682 AP3M2P53677 418 aa18.41■□□□□ 0.54
COL9A1-210ENST00000493682 CUL4BQ13620 913 aa18.41■□□□□ 0.54
COL9A1-210ENST00000493682 TRIM61Q5EBN2 209 aa18.41■□□□□ 0.54
COL9A1-210ENST00000493682 FOXD4L5Q5VV16 416 aaPredicted RBP18.41■□□□□ 0.54
COL9A1-210ENST00000493682 BTBD8Q5XKL5 378 aa18.41■□□□□ 0.54
COL9A1-210ENST00000493682 ACOT1Q86TX2 421 aa18.41■□□□□ 0.54
COL9A1-210ENST00000493682 TMEM25Q86YD3 366 aa18.41■□□□□ 0.54
COL9A1-210ENST00000493682 PGBD3Q8N328 593 aa18.41■□□□□ 0.54
COL9A1-210ENST00000493682 GOLGA5Q8TBA6 731 aa18.41■□□□□ 0.54
COL9A1-210ENST00000493682 FOXD4L4Q8WXT5 416 aaPredicted RBP18.41■□□□□ 0.54
COL9A1-210ENST00000493682 WBP2Q969T9 261 aa18.41■□□□□ 0.54
COL9A1-210ENST00000493682 SPHK2Q9NRA0 654 aa18.41■□□□□ 0.54
COL9A1-210ENST00000493682 KRT82Q9NSB4 513 aa18.41■□□□□ 0.54
COL9A1-210ENST00000493682 TMEM74BQ9NUR3 256 aa18.41■□□□□ 0.54
COL9A1-210ENST00000493682 COMMD8Q9NX08 183 aa18.41■□□□□ 0.54
COL9A1-210ENST00000493682 DEC1Q9P2X7 70 aa18.41■□□□□ 0.54
COL9A1-210ENST00000493682 WASF3Q9UPY6 502 aa18.41■□□□□ 0.54
COL9A1-210ENST00000493682 FRYQ5TBA9 3013 aa18.41■□□□□ 0.54
COL9A1-210ENST00000493682 CFAP47Q6ZTR5 3102 aa18.4■□□□□ 0.54
COL9A1-210ENST00000493682 VNN1O95497 513 aa18.4■□□□□ 0.54
COL9A1-210ENST00000493682 PGFP49763 221 aa18.4■□□□□ 0.54
COL9A1-210ENST00000493682 LMAN2Q12907 356 aa18.4■□□□□ 0.54
COL9A1-210ENST00000493682 FOXC1Q12948 553 aa18.4■□□□□ 0.54
COL9A1-210ENST00000493682 BYSLQ13895 437 aaKnown RBP18.4■□□□□ 0.54
COL9A1-210ENST00000493682 ANO4Q32M45 955 aa18.4■□□□□ 0.54
COL9A1-210ENST00000493682 UAP1L1Q3KQV9 507 aa18.4■□□□□ 0.54
COL9A1-210ENST00000493682 SPDYCQ5MJ68 293 aa18.4■□□□□ 0.54
COL9A1-210ENST00000493682 SYT12Q8IV01 421 aa18.4■□□□□ 0.54
COL9A1-210ENST00000493682 GRAMD1CQ8IYS0 662 aa18.4■□□□□ 0.54
COL9A1-210ENST00000493682 ZNF513Q8N8E2 541 aaPredicted RBP18.4■□□□□ 0.54
COL9A1-210ENST00000493682 ZMIZ2Q8NF64 920 aa18.4■□□□□ 0.54
COL9A1-210ENST00000493682 KCNV2Q8TDN2 545 aa18.4■□□□□ 0.54
COL9A1-210ENST00000493682 SMOQ99835 787 aa18.4■□□□□ 0.54
COL9A1-210ENST00000493682 NACA2Q9H009 215 aa18.4■□□□□ 0.54
COL9A1-210ENST00000493682 DMAC2Q9NW81 257 aa18.4■□□□□ 0.54
COL9A1-210ENST00000493682 BEST1O76090 585 aa18.39■□□□□ 0.53
COL9A1-210ENST00000493682 IRF1P10914 325 aa18.39■□□□□ 0.53
COL9A1-210ENST00000493682 CCDC130P13994 396 aa18.39■□□□□ 0.53
COL9A1-210ENST00000493682 ORC1Q13415 861 aa18.39■□□□□ 0.53
COL9A1-210ENST00000493682 FOXD4L6Q3SYB3 417 aaPredicted RBP18.39■□□□□ 0.53
COL9A1-210ENST00000493682 PREPLQ4J6C6 727 aaPredicted RBP18.39■□□□□ 0.53
COL9A1-210ENST00000493682 C10orf76Q5T2E6 689 aa18.39■□□□□ 0.53
COL9A1-210ENST00000493682 FOXD4L3Q6VB84 417 aaPredicted RBP18.39■□□□□ 0.53
COL9A1-210ENST00000493682 TRMT11Q7Z4G4 463 aaKnown RBP18.39■□□□□ 0.53
COL9A1-210ENST00000493682 TERB1Q8NA31 727 aa18.39■□□□□ 0.53
COL9A1-210ENST00000493682 NUSAP1Q9BXS6 441 aaKnown RBP18.39■□□□□ 0.53
COL9A1-210ENST00000493682 CSNK1G1Q9HCP0 422 aa18.39■□□□□ 0.53
COL9A1-210ENST00000493682 FAM13BQ9NYF5 915 aa18.39■□□□□ 0.53
COL9A1-210ENST00000493682 HCN2Q9UL51 889 aa18.39■□□□□ 0.53
COL9A1-210ENST00000493682 PCDHA7Q9UN72 937 aa18.39■□□□□ 0.53
COL9A1-210ENST00000493682 CEP295Q9C0D2 2601 aa18.38■□□□□ 0.53
COL9A1-210ENST00000493682 TNRC6BQ9UPQ9 1833 aaKnown RBP18.38■□□□□ 0.53
COL9A1-210ENST00000493682 C1QTNF9BB2RNN3 333 aa18.38■□□□□ 0.53
COL9A1-210ENST00000493682 TRIM24O15164 1050 aa18.38■□□□□ 0.53
COL9A1-210ENST00000493682 GREM1O60565 184 aa18.38■□□□□ 0.53
COL9A1-210ENST00000493682 TLR5O60602 858 aa18.38■□□□□ 0.53
COL9A1-210ENST00000493682 C1QTNF9P0C862 333 aa18.38■□□□□ 0.53
COL9A1-210ENST00000493682 P4HA1P13674 534 aa18.38■□□□□ 0.53
COL9A1-210ENST00000493682 MAPK8P45983 427 aa18.38■□□□□ 0.53
COL9A1-210ENST00000493682 ME1P48163 572 aa18.38■□□□□ 0.53
COL9A1-210ENST00000493682 DLG4P78352 724 aa18.38■□□□□ 0.53
COL9A1-210ENST00000493682 RESP18Q5W5W9 173 aa18.38■□□□□ 0.53
COL9A1-210ENST00000493682 LYSMD4Q5XG99 296 aa18.38■□□□□ 0.53
COL9A1-210ENST00000493682 SLC9A9Q8IVB4 645 aa18.38■□□□□ 0.53
COL9A1-210ENST00000493682 CRYBG2Q8N1P7 616 aa18.38■□□□□ 0.53
COL9A1-210ENST00000493682 DEFB124Q8NES8 71 aa18.38■□□□□ 0.53
COL9A1-210ENST00000493682 SLC2A14Q8TDB8 520 aa18.38■□□□□ 0.53
COL9A1-210ENST00000493682 HMGXB4Q9UGU5 601 aa18.38■□□□□ 0.53
COL9A1-210ENST00000493682 PILRBQ9UKJ0 227 aa18.38■□□□□ 0.53
COL9A1-210ENST00000493682 KLRC4O43908 158 aa18.37■□□□□ 0.53
COL9A1-210ENST00000493682 TBX18O95935 607 aa18.37■□□□□ 0.53
COL9A1-210ENST00000493682 TOP3BO95985 862 aaKnown RBP18.37■□□□□ 0.53
COL9A1-210ENST00000493682 ENGP17813 658 aa18.37■□□□□ 0.53
COL9A1-210ENST00000493682 GABRG2P18507 467 aa18.37■□□□□ 0.53
COL9A1-210ENST00000493682 SPINK2P20155 84 aa18.37■□□□□ 0.53
COL9A1-210ENST00000493682 ITPKAP23677 461 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms