RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 SUSD2Q9UGT4 822 aa18.78■□□□□ 0.6
NUP50-218ENST00000493456 STARD13Q9Y3M8 1113 aa18.78■□□□□ 0.6
NUP50-218ENST00000493456 GON4LQ3T8J9 2241 aa18.78■□□□□ 0.6
NUP50-218ENST00000493456 IGHV1OR15-9A0A0B4J2B8 117 aa18.77■□□□□ 0.6
NUP50-218ENST00000493456 PTPN1P18031 435 aaKnown RBP18.77■□□□□ 0.6
NUP50-218ENST00000493456 CACNA2D1P54289 1103 aa18.77■□□□□ 0.6
NUP50-218ENST00000493456 HECTD3Q5T447 861 aa18.77■□□□□ 0.6
NUP50-218ENST00000493456 SNX30Q5VWJ9 437 aa18.77■□□□□ 0.6
NUP50-218ENST00000493456 CCDC73Q6ZRK6 1079 aa18.77■□□□□ 0.6
NUP50-218ENST00000493456 TRAPPC11Q7Z392 1133 aa18.77■□□□□ 0.6
NUP50-218ENST00000493456 CBWD2Q8IUF1 395 aa18.77■□□□□ 0.6
NUP50-218ENST00000493456 NAT16Q8N8M0 369 aa18.77■□□□□ 0.6
NUP50-218ENST00000493456 ZNF518BQ9C0D4 1074 aa18.77■□□□□ 0.6
NUP50-218ENST00000493456 FAM124BQ9H5Z6 455 aaPredicted RBP18.77■□□□□ 0.6
NUP50-218ENST00000493456 SPHK2Q9NRA0 654 aa18.77■□□□□ 0.6
NUP50-218ENST00000493456 PANK4Q9NVE7 773 aa18.77■□□□□ 0.6
NUP50-218ENST00000493456 GPSM3Q9Y4H4 160 aa18.77■□□□□ 0.6
NUP50-218ENST00000493456 CEP192Q8TEP8 1941 aa18.76■□□□□ 0.59
NUP50-218ENST00000493456 ADAMTS9Q9P2N4 1935 aa18.76■□□□□ 0.59
NUP50-218ENST00000493456 A0A1W2PQF6 199 aa18.76■□□□□ 0.59
NUP50-218ENST00000493456 TNNC1P63316 161 aa18.76■□□□□ 0.59
NUP50-218ENST00000493456 TRIP6Q15654 476 aaKnown RBP18.76■□□□□ 0.59
NUP50-218ENST00000493456 ANO4Q32M45 955 aa18.76■□□□□ 0.59
NUP50-218ENST00000493456 SLC41A1Q8IVJ1 513 aa18.76■□□□□ 0.59
NUP50-218ENST00000493456 DEFB119Q8N690 84 aa18.76■□□□□ 0.59
NUP50-218ENST00000493456 B3GALNT2Q8NCR0 500 aa18.76■□□□□ 0.59
NUP50-218ENST00000493456 HSPA12BQ96MM6 686 aa18.76■□□□□ 0.59
NUP50-218ENST00000493456 TMEM30AQ9NV96 361 aa18.76■□□□□ 0.59
NUP50-218ENST00000493456 FBXO2Q9UK22 296 aaPredicted RBP18.76■□□□□ 0.59
NUP50-218ENST00000493456 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.76■□□□□ 0.59
NUP50-218ENST00000493456 NME7Q9Y5B8 376 aa18.76■□□□□ 0.59
NUP50-218ENST00000493456 PCDHB9Q9Y5E1 797 aa18.76■□□□□ 0.59
NUP50-218ENST00000493456 SRPRBQ9Y5M8 271 aaKnown RBP18.76■□□□□ 0.59
NUP50-218ENST00000493456 MYOFQ9NZM1 2061 aa18.76■□□□□ 0.59
NUP50-218ENST00000493456 IGSF10Q6WRI0 2623 aa18.76■□□□□ 0.59
NUP50-218ENST00000493456 ATP8B3O60423 1300 aa18.75■□□□□ 0.59
NUP50-218ENST00000493456 GJB3O75712 270 aa18.75■□□□□ 0.59
NUP50-218ENST00000493456 GNSP15586 552 aa18.75■□□□□ 0.59
NUP50-218ENST00000493456 NDUFV2P19404 249 aa18.75■□□□□ 0.59
NUP50-218ENST00000493456 SYCP2LQ5T4T6 812 aa18.75■□□□□ 0.59
NUP50-218ENST00000493456 GRAMD4Q6IC98 578 aa18.75■□□□□ 0.59
NUP50-218ENST00000493456 SDE2Q6IQ49 451 aa18.75■□□□□ 0.59
NUP50-218ENST00000493456 BBS7Q8IWZ6 715 aa18.75■□□□□ 0.59
NUP50-218ENST00000493456 TRIML1Q8N9V2 468 aa18.75■□□□□ 0.59
NUP50-218ENST00000493456 ADAMTS14Q8WXS8 1223 aa18.75■□□□□ 0.59
NUP50-218ENST00000493456 DPEP3Q9H4B8 488 aa18.75■□□□□ 0.59
NUP50-218ENST00000493456 HSPBP1Q9NZL4 362 aa18.75■□□□□ 0.59
NUP50-218ENST00000493456 GCN1Q92616 2671 aaKnown RBP18.75■□□□□ 0.59
NUP50-218ENST00000493456 FTH1P19P0C7X4 201 aa18.74■□□□□ 0.59
NUP50-218ENST00000493456 STAT6P42226 847 aa18.74■□□□□ 0.59
NUP50-218ENST00000493456 SCAPQ12770 1279 aa18.74■□□□□ 0.59
NUP50-218ENST00000493456 PLEKHG6Q3KR16 790 aa18.74■□□□□ 0.59
NUP50-218ENST00000493456 WDR72Q3MJ13 1102 aa18.74■□□□□ 0.59
NUP50-218ENST00000493456 TMEM25Q86YD3 366 aa18.74■□□□□ 0.59
NUP50-218ENST00000493456 MIB1Q86YT6 1006 aa18.74■□□□□ 0.59
NUP50-218ENST00000493456 NAXDQ8IW45 347 aa18.74■□□□□ 0.59
NUP50-218ENST00000493456 CCDC65Q8IXS2 484 aa18.74■□□□□ 0.59
NUP50-218ENST00000493456 CHPFQ8IZ52 775 aa18.74■□□□□ 0.59
NUP50-218ENST00000493456 OR2I1PQ8NGU4 316 aa18.74■□□□□ 0.59
NUP50-218ENST00000493456 IPO4Q8TEX9 1081 aaKnown RBP18.74■□□□□ 0.59
NUP50-218ENST00000493456 FOXJ1Q92949 421 aa18.74■□□□□ 0.59
NUP50-218ENST00000493456 ZNF419Q96HQ0 510 aaPredicted RBP18.74■□□□□ 0.59
NUP50-218ENST00000493456 GABRG3Q99928 467 aa18.74■□□□□ 0.59
NUP50-218ENST00000493456 B3GNT5Q9BYG0 378 aa18.74■□□□□ 0.59
NUP50-218ENST00000493456 ZDHHC5Q9C0B5 715 aa18.74■□□□□ 0.59
NUP50-218ENST00000493456 CD248Q9HCU0 757 aa18.74■□□□□ 0.59
NUP50-218ENST00000493456 COMMD8Q9NX08 183 aa18.74■□□□□ 0.59
NUP50-218ENST00000493456 HCN2Q9UL51 889 aa18.74■□□□□ 0.59
NUP50-218ENST00000493456 CYP8B1Q9UNU6 501 aa18.74■□□□□ 0.59
NUP50-218ENST00000493456 CLIC4Q9Y696 253 aa18.74■□□□□ 0.59
NUP50-218ENST00000493456 MYO18AQ92614 2054 aaKnown RBP18.73■□□□□ 0.59
NUP50-218ENST00000493456 A8MXQ7 604 aa18.73■□□□□ 0.59
NUP50-218ENST00000493456 CLDN5O00501 218 aa18.73■□□□□ 0.59
NUP50-218ENST00000493456 SH3BP5O60239 455 aa18.73■□□□□ 0.59
NUP50-218ENST00000493456 NDUFS2O75306 463 aa18.73■□□□□ 0.59
NUP50-218ENST00000493456 STAU1O95793 577 aaKnown RBP18.73■□□□□ 0.59
NUP50-218ENST00000493456 CST3P01034 146 aaPredicted RBP18.73■□□□□ 0.59
NUP50-218ENST00000493456 DLATP10515 647 aaKnown RBP18.73■□□□□ 0.59
NUP50-218ENST00000493456 TNNI1P19237 187 aa18.73■□□□□ 0.59
NUP50-218ENST00000493456 WASP42768 502 aa18.73■□□□□ 0.59
NUP50-218ENST00000493456 SLC5A3P53794 718 aa18.73■□□□□ 0.59
NUP50-218ENST00000493456 SNRNP35Q16560 246 aaKnown RBP18.73■□□□□ 0.59
NUP50-218ENST00000493456 WDR45BQ5MNZ6 344 aa18.73■□□□□ 0.59
NUP50-218ENST00000493456 EGFLAMQ63HQ2 1017 aa18.73■□□□□ 0.59
NUP50-218ENST00000493456 RGL4Q8IZJ4 473 aa18.73■□□□□ 0.59
NUP50-218ENST00000493456 SCFD1Q8WVM8 642 aa18.73■□□□□ 0.59
NUP50-218ENST00000493456 CAMK1GQ96NX5 476 aa18.73■□□□□ 0.59
NUP50-218ENST00000493456 XPO6Q96QU8 1125 aaKnown RBP18.73■□□□□ 0.59
NUP50-218ENST00000493456 CGRRF1Q99675 332 aa18.73■□□□□ 0.59
NUP50-218ENST00000493456 NACA2Q9H009 215 aa18.73■□□□□ 0.59
NUP50-218ENST00000493456 CCSER2Q9H7U1 834 aa18.73■□□□□ 0.59
NUP50-218ENST00000493456 DNAJC17Q9NVM6 304 aaKnown RBP18.73■□□□□ 0.59
NUP50-218ENST00000493456 IL37Q9NZH6 218 aa18.73■□□□□ 0.59
NUP50-218ENST00000493456 ADAMTS20P59510 1910 aa18.72■□□□□ 0.59
NUP50-218ENST00000493456 FAM92AA1XBS5 289 aa18.72■□□□□ 0.59
NUP50-218ENST00000493456 CACNG3O60359 315 aa18.72■□□□□ 0.59
NUP50-218ENST00000493456 ZDHHC11BP0C7U3 371 aa18.72■□□□□ 0.59
NUP50-218ENST00000493456 ERICH6BQ5W0A0 696 aa18.72■□□□□ 0.59
NUP50-218ENST00000493456 SCAMP5Q8TAC9 235 aa18.72■□□□□ 0.59
NUP50-218ENST00000493456 CLIC6Q96NY7 704 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms