RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 ATXN2Q99700 1313 aaKnown RBP11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 IGHV1OR15-9A0A0B4J2B8 117 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 FAM92AA1XBS5 289 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 A8MXQ7 604 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 GFRA2O00451 464 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 EIF3DO15371 548 aaKnown RBP eCLIP11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 COCHO43405 550 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 TNNI1P19237 187 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 ZNF132P52740 706 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 GOLGA8FQ08AF8 430 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 GOLGA8DPQ0D2H9 430 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 MESP2Q0VG99 397 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 E2F5Q15329 346 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 WDR72Q3MJ13 1102 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 WDR45BQ5MNZ6 344 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 C10orf76Q5T2E6 689 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 SCARA3Q6AZY7 606 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 GRAMD4Q6IC98 578 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 CBWD2Q8IUF1 395 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 FRMD1Q8N878 549 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 ADAMTS14Q8WXS8 1223 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 FBXO32Q969P5 355 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 SYAP1Q96A49 352 aaPredicted RBP11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 ZFRQ96KR1 1074 aaKnown RBP11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 CGRRF1Q99675 332 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 GABRG3Q99928 467 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 MRPL45Q9BRJ2 306 aaKnown RBP11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 NACA2Q9H009 215 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 TNMDQ9H2S6 317 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 IL37Q9NZH6 218 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 CALCOCO1Q9P1Z2 691 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 NFE2L3Q9Y4A8 694 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 PCDHB9Q9Y5E1 797 aa11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 DSPP15924 2871 aaKnown RBP11.67□□□□□ -0.54
SNRNP200-207ENST00000493271 PCNX2A6NKB5 2137 aa11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 UBE4BO95155 1302 aa11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 ANTXRLA6NF34 631 aa11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 TAF4O00268 1085 aa11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 NPC1O15118 1278 aa11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 CACNG3O60359 315 aa11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 NDUFS2O75306 463 aa11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 ZDHHC11BP0C7U3 371 aa11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 CD59P13987 128 aa11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 AMPD3Q01432 767 aa11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 TRPC3Q13507 836 aa11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 PSMD6Q15008 389 aa11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 TRIP6Q15654 476 aaKnown RBP11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 SNRNP35Q16560 246 aaKnown RBP11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 ANO4Q32M45 955 aa11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 METTL3Q86U44 580 aaKnown RBP11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 SFTPA1Q8IWL2 248 aa11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 CHPFQ8IZ52 775 aa11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 IPO4Q8TEX9 1081 aaKnown RBP11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 SMARCD1Q96GM5 515 aa11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 ZNF419Q96HQ0 510 aaPredicted RBP11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 FAM84AQ96KN4 292 aa11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 HSPA12BQ96MM6 686 aa11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 ZNF518BQ9C0D4 1074 aa11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 CUEDC2Q9H467 287 aa11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 FBXO44Q9H4M3 255 aa11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 VRTNQ9H8Y1 702 aa11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 DMAP1Q9NPF5 467 aaPredicted RBP11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 MARK1Q9P0L2 795 aa11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 WDR35Q9P2L0 1181 aa11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 CGNQ9P2M7 1197 aaKnown RBP11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 LSM7Q9UK45 103 aaKnown RBP11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 APOBEC2Q9Y235 224 aaKnown RBP11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 CLIC4Q9Y696 253 aa11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 ANKRD11Q6UB99 2663 aaPredicted RBP11.66□□□□□ -0.54
SNRNP200-207ENST00000493271 PCDH15Q96QU1 1955 aa11.65□□□□□ -0.54
SNRNP200-207ENST00000493271 A0A1W2PQF6 199 aa11.65□□□□□ -0.54
SNRNP200-207ENST00000493271 VPS37CA5D8V6 355 aaPredicted RBP11.65□□□□□ -0.54
SNRNP200-207ENST00000493271 GJB3O75712 270 aa11.65□□□□□ -0.54
SNRNP200-207ENST00000493271 CST3P01034 146 aaPredicted RBP11.65□□□□□ -0.54
SNRNP200-207ENST00000493271 CAPNS1P04632 268 aa11.65□□□□□ -0.54
SNRNP200-207ENST00000493271 DLATP10515 647 aaKnown RBP11.65□□□□□ -0.54
SNRNP200-207ENST00000493271 HOXB3P14651 431 aaPredicted RBP11.65□□□□□ -0.54
SNRNP200-207ENST00000493271 TRIM21P19474 475 aaKnown RBP11.65□□□□□ -0.54
SNRNP200-207ENST00000493271 AP3M2P53677 418 aa11.65□□□□□ -0.54
SNRNP200-207ENST00000493271 SLC5A3P53794 718 aa11.65□□□□□ -0.54
SNRNP200-207ENST00000493271 IFRD2Q12894 506 aaPredicted RBP11.65□□□□□ -0.54
SNRNP200-207ENST00000493271 PLEKHG6Q3KR16 790 aa11.65□□□□□ -0.54
SNRNP200-207ENST00000493271 HTR3DQ70Z44 454 aa11.65□□□□□ -0.54
SNRNP200-207ENST00000493271 GLRX5Q86SX6 157 aa11.65□□□□□ -0.54
SNRNP200-207ENST00000493271 BBS7Q8IWZ6 715 aa11.65□□□□□ -0.54
SNRNP200-207ENST00000493271 RGL4Q8IZJ4 473 aa11.65□□□□□ -0.54
SNRNP200-207ENST00000493271 CHCHD4Q8N4Q1 142 aa11.65□□□□□ -0.54
SNRNP200-207ENST00000493271 NAT16Q8N8M0 369 aa11.65□□□□□ -0.54
SNRNP200-207ENST00000493271 TRIML1Q8N9V2 468 aa11.65□□□□□ -0.54
SNRNP200-207ENST00000493271 ZNF507Q8TCN5 953 aa11.65□□□□□ -0.54
SNRNP200-207ENST00000493271 SCFD1Q8WVM8 642 aa11.65□□□□□ -0.54
SNRNP200-207ENST00000493271 B3GNT5Q9BYG0 378 aa11.65□□□□□ -0.54
SNRNP200-207ENST00000493271 FGFBP2Q9BYJ0 223 aa11.65□□□□□ -0.54
SNRNP200-207ENST00000493271 UPF2Q9HAU5 1272 aaKnown RBP11.65□□□□□ -0.54
SNRNP200-207ENST00000493271 FREM2Q5SZK8 3169 aa11.65□□□□□ -0.54
SNRNP200-207ENST00000493271 PI4KAP42356 2102 aa11.65□□□□□ -0.55
SNRNP200-207ENST00000493271 SCAMP3O14828 347 aaKnown RBP11.64□□□□□ -0.55
SNRNP200-207ENST00000493271 ZNF883P0CG24 379 aa11.64□□□□□ -0.55
SNRNP200-207ENST00000493271 NDUFV2P19404 249 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms