RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 RNF40O75150 1001 aa15.52■□□□□ 0.08
SS18L1-205ENST00000492466 CILPO75339 1184 aa15.52■□□□□ 0.08
SS18L1-205ENST00000492466 FAM200BP0CF97 657 aa15.52■□□□□ 0.08
SS18L1-205ENST00000492466 PXNP49023 591 aaPredicted RBP15.52■□□□□ 0.08
SS18L1-205ENST00000492466 MARSP56192 900 aaKnown RBP15.52■□□□□ 0.08
SS18L1-205ENST00000492466 USP46P62068 366 aa15.52■□□□□ 0.08
SS18L1-205ENST00000492466 GRSF1Q12849 480 aaKnown RBP eCLIP15.52■□□□□ 0.087e-7■■■■□ 25.9
SS18L1-205ENST00000492466 USP4Q13107 963 aa15.52■□□□□ 0.08
SS18L1-205ENST00000492466 EML3Q32P44 896 aa15.52■□□□□ 0.08
SS18L1-205ENST00000492466 DENND5BQ6ZUT9 1274 aa15.52■□□□□ 0.08
SS18L1-205ENST00000492466 ARL14EPQ8N8R7 260 aaPredicted RBP15.52■□□□□ 0.08
SS18L1-205ENST00000492466 TTC16Q8NEE8 873 aa15.52■□□□□ 0.08
SS18L1-205ENST00000492466 SLC2A14Q8TDB8 520 aa15.52■□□□□ 0.08
SS18L1-205ENST00000492466 OSCP1Q8WVF1 389 aa15.52■□□□□ 0.08
SS18L1-205ENST00000492466 TATDN2Q93075 761 aa15.52■□□□□ 0.08
SS18L1-205ENST00000492466 FAXDC2Q96IV6 333 aa15.52■□□□□ 0.08
SS18L1-205ENST00000492466 SPATA17Q96L03 361 aa15.52■□□□□ 0.08
SS18L1-205ENST00000492466 CISHQ9NSE2 258 aa15.52■□□□□ 0.08
SS18L1-205ENST00000492466 COQ4Q9Y3A0 265 aa15.52■□□□□ 0.08
SS18L1-205ENST00000492466 EML5Q05BV3 1969 aa15.52■□□□□ 0.07
SS18L1-205ENST00000492466 SPAG17Q6Q759 2223 aa15.52■□□□□ 0.07
SS18L1-205ENST00000492466 TRAV19A0A0A6YYK7 116 aa15.51■□□□□ 0.07
SS18L1-205ENST00000492466 SLC30A4O14863 429 aa15.51■□□□□ 0.07
SS18L1-205ENST00000492466 GDF9O60383 454 aa15.51■□□□□ 0.07
SS18L1-205ENST00000492466 ABL1P00519 1130 aa15.51■□□□□ 0.07
SS18L1-205ENST00000492466 USP17L7P0C7H9 530 aa15.51■□□□□ 0.07
SS18L1-205ENST00000492466 CD19P15391 556 aa15.51■□□□□ 0.07
SS18L1-205ENST00000492466 TCF3P15923 654 aa15.51■□□□□ 0.07
SS18L1-205ENST00000492466 DRD1P21728 446 aa15.51■□□□□ 0.07
SS18L1-205ENST00000492466 CT47A1Q5JQC4 288 aaPredicted RBP15.51■□□□□ 0.07
SS18L1-205ENST00000492466 CC2D1AQ6P1N0 951 aaPredicted RBP15.51■□□□□ 0.07
SS18L1-205ENST00000492466 PRR23CQ6ZRP0 262 aa15.51■□□□□ 0.07
SS18L1-205ENST00000492466 GAB3Q8WWW8 586 aa15.51■□□□□ 0.07
SS18L1-205ENST00000492466 C8orf48Q96LL4 319 aa15.51■□□□□ 0.07
SS18L1-205ENST00000492466 HEXIM2Q96MH2 286 aaKnown RBP15.51■□□□□ 0.07
SS18L1-205ENST00000492466 TWNKQ96RR1 684 aa15.51■□□□□ 0.07
SS18L1-205ENST00000492466 INTS2Q9H0H0 1204 aaKnown RBP15.51■□□□□ 0.07
SS18L1-205ENST00000492466 LINC00597Q9H2U6 94 aa15.51■□□□□ 0.07
SS18L1-205ENST00000492466 TMEM30AQ9NV96 361 aa15.51■□□□□ 0.07
SS18L1-205ENST00000492466 DUS2Q9NX74 493 aaKnown RBP15.51■□□□□ 0.07
SS18L1-205ENST00000492466 WNT6Q9Y6F9 365 aa15.51■□□□□ 0.07
SS18L1-205ENST00000492466 CHD8Q9HCK8 2581 aa15.51■□□□□ 0.07
SS18L1-205ENST00000492466 KMT2BQ9UMN6 2715 aaPredicted RBP15.51■□□□□ 0.07
SS18L1-205ENST00000492466 ASPMQ8IZT6 3477 aa15.51■□□□□ 0.07
SS18L1-205ENST00000492466 CNOT1A5YKK6 2376 aaKnown RBP15.5■□□□□ 0.07
SS18L1-205ENST00000492466 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.5■□□□□ 0.07
SS18L1-205ENST00000492466 KCNJ18B7U540 433 aa15.5■□□□□ 0.07
SS18L1-205ENST00000492466 RTN3O95197 1032 aaPredicted RBP15.5■□□□□ 0.07
SS18L1-205ENST00000492466 CKMP06732 381 aa15.5■□□□□ 0.07
SS18L1-205ENST00000492466 HDCP19113 662 aa15.5■□□□□ 0.07
SS18L1-205ENST00000492466 CACNA2D1P54289 1103 aa15.5■□□□□ 0.07
SS18L1-205ENST00000492466 SLC8A3P57103 927 aa15.5■□□□□ 0.07
SS18L1-205ENST00000492466 KCNJ12Q14500 433 aa15.5■□□□□ 0.07
SS18L1-205ENST00000492466 MAN2A1Q16706 1144 aa15.5■□□□□ 0.07
SS18L1-205ENST00000492466 GAB4Q2WGN9 574 aa15.5■□□□□ 0.07
SS18L1-205ENST00000492466 RBM43Q6ZSC3 357 aaKnown RBP15.5■□□□□ 0.07
SS18L1-205ENST00000492466 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.5■□□□□ 0.07
SS18L1-205ENST00000492466 C12orf29Q8N999 325 aa15.5■□□□□ 0.07
SS18L1-205ENST00000492466 ANKRD20A12PQ8NF67 263 aa15.5■□□□□ 0.07
SS18L1-205ENST00000492466 NETO1Q8TDF5 533 aa15.5■□□□□ 0.07
SS18L1-205ENST00000492466 SH3RF2Q8TEC5 729 aa15.5■□□□□ 0.07
SS18L1-205ENST00000492466 CYFIP2Q96F07 1278 aa15.5■□□□□ 0.07
SS18L1-205ENST00000492466 CEP295NLQ96MC4 621 aa15.5■□□□□ 0.07
SS18L1-205ENST00000492466 SLITRK1Q96PX8 696 aa15.5■□□□□ 0.07
SS18L1-205ENST00000492466 P2RY13Q9BPV8 354 aa15.5■□□□□ 0.07
SS18L1-205ENST00000492466 TTLL2Q9BWV7 592 aa15.5■□□□□ 0.07
SS18L1-205ENST00000492466 NAT10Q9H0A0 1025 aaKnown RBP15.5■□□□□ 0.07
SS18L1-205ENST00000492466 TMEM63CQ9P1W3 806 aa15.5■□□□□ 0.07
SS18L1-205ENST00000492466 ARHGAP26Q9UNA1 814 aa15.5■□□□□ 0.07
SS18L1-205ENST00000492466 NFE2L3Q9Y4A8 694 aa15.5■□□□□ 0.07
SS18L1-205ENST00000492466 PCDHB4Q9Y5E5 795 aa15.5■□□□□ 0.07
SS18L1-205ENST00000492466 CFAP47Q6ZTR5 3102 aa15.49■□□□□ 0.07
SS18L1-205ENST00000492466 ZNF840PA6NDX5 716 aa15.49■□□□□ 0.07
SS18L1-205ENST00000492466 ANTXRLA6NF34 631 aa15.49■□□□□ 0.07
SS18L1-205ENST00000492466 ATG13O75143 517 aa15.49■□□□□ 0.07
SS18L1-205ENST00000492466 OLFM2O95897 454 aa15.49■□□□□ 0.07
SS18L1-205ENST00000492466 MAP3K7CLP57077 242 aa15.49■□□□□ 0.07
SS18L1-205ENST00000492466 MCCD1P59942 119 aaPredicted RBP15.49■□□□□ 0.07
SS18L1-205ENST00000492466 AMPD2Q01433 879 aa15.49■□□□□ 0.07
SS18L1-205ENST00000492466 TYRO3Q06418 890 aa15.49■□□□□ 0.07
SS18L1-205ENST00000492466 GBP6Q6ZN66 633 aa15.49■□□□□ 0.07
SS18L1-205ENST00000492466 C11orf57Q6ZUT1 292 aaPredicted RBP15.49■□□□□ 0.07
SS18L1-205ENST00000492466 CEP68Q76N32 757 aa15.49■□□□□ 0.07
SS18L1-205ENST00000492466 KBTBD6Q86V97 674 aa15.49■□□□□ 0.07
SS18L1-205ENST00000492466 FUKQ8N0W3 1084 aa15.49■□□□□ 0.07
SS18L1-205ENST00000492466 CRYBG2Q8N1P7 616 aa15.49■□□□□ 0.07
SS18L1-205ENST00000492466 CPA6Q8N4T0 437 aa15.49■□□□□ 0.07
SS18L1-205ENST00000492466 CAMKK1Q8N5S9 505 aa15.49■□□□□ 0.07
SS18L1-205ENST00000492466 FBXO32Q969P5 355 aa15.49■□□□□ 0.07
SS18L1-205ENST00000492466 TMEM176AQ96HP8 235 aa15.49■□□□□ 0.07
SS18L1-205ENST00000492466 CRACR2AQ9BSW2 395 aa15.49■□□□□ 0.07
SS18L1-205ENST00000492466 RNF38Q9H0F5 515 aa15.49■□□□□ 0.07
SS18L1-205ENST00000492466 FAM124BQ9H5Z6 455 aaPredicted RBP15.49■□□□□ 0.07
SS18L1-205ENST00000492466 TRPM5Q9NZQ8 1165 aa15.49■□□□□ 0.07
SS18L1-205ENST00000492466 HESX1Q9UBX0 185 aa15.49■□□□□ 0.07
SS18L1-205ENST00000492466 FRYQ5TBA9 3013 aa15.49■□□□□ 0.07
SS18L1-205ENST00000492466 KIAA1549LQ6ZVL6 1849 aa15.49■□□□□ 0.07
SS18L1-205ENST00000492466 WDFY3Q8IZQ1 3526 aa15.48■□□□□ 0.07
SS18L1-205ENST00000492466 PMM2O15305 246 aa15.48■□□□□ 0.07
SS18L1-205ENST00000492466 RPP40O75818 363 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms