RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 GPRIN1Q7Z2K8 1008 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 DGLUCYQ7Z3D6 616 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 TTC39CQ8N584 583 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 CAMKK1Q8N5S9 505 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 FAM160A2Q8N612 972 aaPredicted RBP8.73□□□□□ -1.01
LSM2-213ENST00000491421 FBXL13Q8NEE6 735 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 ENGASEQ8NFI3 743 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 WHAMMQ8TF30 809 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 GAB3Q8WWW8 586 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 SEMA4DQ92854 862 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 ERCC4Q92889 916 aaPredicted RBP8.73□□□□□ -1.01
LSM2-213ENST00000491421 OTUB2Q96DC9 234 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 CYFIP2Q96F07 1278 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 HHIPQ96QV1 700 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 GTPBP4Q9BZE4 634 aaKnown RBP8.73□□□□□ -1.01
LSM2-213ENST00000491421 PARD6AQ9NPB6 346 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 TLR8Q9NR97 1041 aaKnown RBP8.73□□□□□ -1.01
LSM2-213ENST00000491421 RAB20Q9NX57 234 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 PCDHA5Q9Y5H7 936 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 FANCMQ8IYD8 2048 aa8.73□□□□□ -1.01
LSM2-213ENST00000491421 OBSL1O75147 1896 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.72□□□□□ -1.01
LSM2-213ENST00000491421 HHLA1C9JL84 531 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 K7EQS6 105 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 PSMA7O14818 248 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 AXIN1O15169 862 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 LRP3O75074 770 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 ACO1P21399 889 aaKnown RBP8.72□□□□□ -1.01
LSM2-213ENST00000491421 SDHBP21912 280 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 TGM1P22735 817 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 EIF2DP41214 584 aaKnown RBP8.72□□□□□ -1.01
LSM2-213ENST00000491421 SLC6A11P48066 632 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 PGFP49763 221 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 PMS1P54277 932 aaKnown RBP8.72□□□□□ -1.01
LSM2-213ENST00000491421 FKBP3Q00688 224 aaKnown RBP8.72□□□□□ -1.01
LSM2-213ENST00000491421 LRRC63Q05C16 580 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 KDSRQ06136 332 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 STIM1Q13586 685 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 C2orf27AQ580R0 203 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 LY6G5CQ5SRR4 150 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 BTBD8Q5XKL5 378 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 ANKRD40Q6AI12 368 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 CACNA2D4Q7Z3S7 1137 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 BBS7Q8IWZ6 715 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 TSTD1Q8NFU3 115 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 SPATA20Q8TB22 786 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 USP33Q8TEY7 942 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 FAXDC2Q96IV6 333 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 HEXIM2Q96MH2 286 aaKnown RBP8.72□□□□□ -1.01
LSM2-213ENST00000491421 TIGD1Q96MW7 591 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 PNKPQ96T60 521 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 PNPLA8Q9NP80 782 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 CYLDQ9NQC7 956 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 CISHQ9NSE2 258 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 DLL3Q9NYJ7 618 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 CDV3Q9UKY7 258 aaKnown RBP8.72□□□□□ -1.01
LSM2-213ENST00000491421 SCML2Q9UQR0 700 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 DNAH14Q0VDD8 3507 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 CACNA1AO00555 2505 aa8.72□□□□□ -1.01
LSM2-213ENST00000491421 A0A1W2PQH9 124 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 TRIM49BA6NDI0 452 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 HOXC11O43248 304 aaPredicted RBP8.71□□□□□ -1.02
LSM2-213ENST00000491421 KAT7O95251 611 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 TBX18O95935 607 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 APODP05090 189 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 ATP5C1P36542 298 aaKnown RBP8.71□□□□□ -1.02
LSM2-213ENST00000491421 GRIA2P42262 883 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 KIF11P52732 1056 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 GAD2Q05329 585 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 GOLGA8FQ08AF8 430 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 GOLGA8DPQ0D2H9 430 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 MESP2Q0VG99 397 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 CSRP2Q16527 193 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 ANO4Q32M45 955 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 CBWD6Q4V339 395 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 CBWD3Q5JTY5 395 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 CBWD5Q5RIA9 395 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 C10orf120Q5SQS8 335 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 PPP1R26Q5T8A7 1209 aaPredicted RBP8.71□□□□□ -1.02
LSM2-213ENST00000491421 TADA2BQ86TJ2 420 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 KBTBD6Q86V97 674 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 C12orf40Q86WS4 652 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 SFTPA1Q8IWL2 248 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 ZC3H3Q8IXZ2 948 aaKnown RBP8.71□□□□□ -1.02
LSM2-213ENST00000491421 CCDC33Q8N5R6 958 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 SLC4A11Q8NBS3 891 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 TMEM176AQ96HP8 235 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 DUSP9Q99956 384 aaKnown RBP8.71□□□□□ -1.02
LSM2-213ENST00000491421 KLF16Q9BXK1 252 aaPredicted RBP8.71□□□□□ -1.02
LSM2-213ENST00000491421 DUSP16Q9BY84 665 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 FAM124BQ9H5Z6 455 aaPredicted RBP8.71□□□□□ -1.02
LSM2-213ENST00000491421 NMUR1Q9HB89 426 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 ARHGEF4Q9NR80 690 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 SPHK2Q9NRA0 654 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 SEMA4GQ9NTN9 838 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 OSER1Q9NX31 292 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 ARMCX3Q9UH62 379 aaPredicted RBP8.71□□□□□ -1.02
LSM2-213ENST00000491421 EBF1Q9UH73 591 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 NAGPAQ9UK23 515 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 LSM7Q9UK45 103 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms