RNA–Protein interactions for RNA: ENST00000491052.5

LIMK1-207, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-207ENST00000491052 PFKPQ01813 784 aa13.49□□□□□ -0.25
LIMK1-207ENST00000491052 USP4Q13107 963 aa13.49□□□□□ -0.25
LIMK1-207ENST00000491052 MEA1Q16626 185 aa13.49□□□□□ -0.25
LIMK1-207ENST00000491052 ARHGAP29Q52LW3 1261 aa13.49□□□□□ -0.25
LIMK1-207ENST00000491052 SNX30Q5VWJ9 437 aa13.49□□□□□ -0.25
LIMK1-207ENST00000491052 PMF1Q6P1K2 205 aa13.49□□□□□ -0.25
LIMK1-207ENST00000491052 CC2D1AQ6P1N0 951 aaPredicted RBP13.49□□□□□ -0.25
LIMK1-207ENST00000491052 CACNA2D4Q7Z3S7 1137 aa13.49□□□□□ -0.25
LIMK1-207ENST00000491052 SIX5Q8N196 739 aa13.49□□□□□ -0.25
LIMK1-207ENST00000491052 ARHGAP18Q8N392 663 aa13.49□□□□□ -0.25
LIMK1-207ENST00000491052 SH3RF2Q8TEC5 729 aa13.49□□□□□ -0.25
LIMK1-207ENST00000491052 SLC35F5Q8WV83 523 aa13.49□□□□□ -0.25
LIMK1-207ENST00000491052 KCTD13Q8WZ19 329 aa13.49□□□□□ -0.25
LIMK1-207ENST00000491052 NDRG1Q92597 394 aaKnown RBP13.49□□□□□ -0.25
LIMK1-207ENST00000491052 IRF7Q92985 503 aa13.49□□□□□ -0.25
LIMK1-207ENST00000491052 ZFYVE19Q96K21 471 aa13.49□□□□□ -0.25
LIMK1-207ENST00000491052 NAP1L5Q96NT1 182 aaPredicted RBP13.49□□□□□ -0.25
LIMK1-207ENST00000491052 RNF38Q9H0F5 515 aa13.49□□□□□ -0.25
LIMK1-207ENST00000491052 PDCL3Q9H2J4 239 aa13.49□□□□□ -0.25
LIMK1-207ENST00000491052 NMUR1Q9HB89 426 aa13.49□□□□□ -0.25
LIMK1-207ENST00000491052 THG1LQ9NWX6 298 aaKnown RBP13.49□□□□□ -0.25
LIMK1-207ENST00000491052 OSER1Q9NX31 292 aa13.49□□□□□ -0.25
LIMK1-207ENST00000491052 CPQQ9Y646 472 aa13.49□□□□□ -0.25
LIMK1-207ENST00000491052 KIAA1549LQ6ZVL6 1849 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 CHADO15335 359 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 OLFM2O95897 454 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 RALAP11233 206 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 RARGP13631 454 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 CYP11B1P15538 503 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 SOX5P35711 763 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 STAT1P42224 750 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 GPD2P43304 727 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 UBASH3AP57075 661 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 JAM2P57087 298 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 ZNF445P59923 1031 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 YWHAGP61981 247 aaKnown RBP eCLIP13.48□□□□□ -0.25
LIMK1-207ENST00000491052 SLC7A9P82251 487 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 FCHO2Q0JRZ9 810 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 MTF1Q14872 753 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 ZNF77Q15935 545 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 TMEM31Q5JXX7 168 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 C10orf120Q5SQS8 335 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 TAF3Q5VWG9 929 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 RSRC2Q7L4I2 434 aaKnown RBP13.48□□□□□ -0.25
LIMK1-207ENST00000491052 SCD5Q86SK9 330 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 RIN3Q8TB24 985 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 CSGALNACT1Q8TDX6 532 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 DNASE1L2Q92874 299 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 ASIC4Q96FT7 647 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 HSFY1Q96LI6 401 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 MIS12Q9H081 205 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 MFSD1Q9H3U5 465 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 C11orf16Q9NQ32 467 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 CYLDQ9NQC7 956 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 CNGB3Q9NQW8 809 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 ARHGEF3Q9NR81 526 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.48□□□□□ -0.25
LIMK1-207ENST00000491052 WNT16Q9UBV4 365 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 NUDT5Q9UKK9 219 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 PCDHGC3Q9UN70 934 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 CEP83Q9Y592 693 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 MUC3AQ02505 3323 aa13.48□□□□□ -0.25
LIMK1-207ENST00000491052 A0A1W2PQC6 194 aa13.47□□□□□ -0.25
LIMK1-207ENST00000491052 LEFTY2O00292 366 aa13.47□□□□□ -0.25
LIMK1-207ENST00000491052 SCAMP3O14828 347 aaKnown RBP13.47□□□□□ -0.25
LIMK1-207ENST00000491052 MDM4O15151 490 aa13.47□□□□□ -0.25
LIMK1-207ENST00000491052 GABBR2O75899 941 aa13.47□□□□□ -0.25
LIMK1-207ENST00000491052 TBX18O95935 607 aa13.47□□□□□ -0.25
LIMK1-207ENST00000491052 IRF1P10914 325 aa13.47□□□□□ -0.25
LIMK1-207ENST00000491052 ATP5C1P36542 298 aaKnown RBP13.47□□□□□ -0.25
LIMK1-207ENST00000491052 ACADSBP45954 432 aa13.47□□□□□ -0.25
LIMK1-207ENST00000491052 DAOAP59103 153 aa13.47□□□□□ -0.25
LIMK1-207ENST00000491052 PLCB2Q00722 1185 aa13.47□□□□□ -0.25
LIMK1-207ENST00000491052 ARID5AQ03989 594 aa13.47□□□□□ -0.25
LIMK1-207ENST00000491052 PDCLQ13371 301 aa13.47□□□□□ -0.25
LIMK1-207ENST00000491052 NR1I3Q14994 352 aa13.47□□□□□ -0.25
LIMK1-207ENST00000491052 PM20D1Q6GTS8 502 aa13.47□□□□□ -0.25
LIMK1-207ENST00000491052 TADA2BQ86TJ2 420 aa13.47□□□□□ -0.25
LIMK1-207ENST00000491052 NOP9Q86U38 636 aaKnown RBP13.47□□□□□ -0.25
LIMK1-207ENST00000491052 DDX42Q86XP3 938 aaKnown RBP eCLIP13.47□□□□□ -0.25
LIMK1-207ENST00000491052 C1orf131Q8NDD1 294 aaKnown RBP13.47□□□□□ -0.25
LIMK1-207ENST00000491052 EPS8L1Q8TE68 723 aa13.47□□□□□ -0.25
LIMK1-207ENST00000491052 PBXIP1Q96AQ6 731 aa13.47□□□□□ -0.25
LIMK1-207ENST00000491052 NOX5Q96PH1 765 aa13.47□□□□□ -0.25
LIMK1-207ENST00000491052 CDK5RAP1Q96SZ6 601 aaKnown RBP13.47□□□□□ -0.25
LIMK1-207ENST00000491052 HEBP1Q9NRV9 189 aa13.47□□□□□ -0.25
LIMK1-207ENST00000491052 GKN1Q9NS71 199 aa13.47□□□□□ -0.25
LIMK1-207ENST00000491052 CLIC5Q9NZA1 410 aa13.47□□□□□ -0.25
LIMK1-207ENST00000491052 IFNKQ9P0W0 207 aa13.47□□□□□ -0.25
LIMK1-207ENST00000491052 CFAP97Q9P2B7 532 aa13.47□□□□□ -0.25
LIMK1-207ENST00000491052 CYTH4Q9UIA0 394 aa13.47□□□□□ -0.25
LIMK1-207ENST00000491052 KRBA1A5PL33 1030 aa13.46□□□□□ -0.25
LIMK1-207ENST00000491052 YJEFN3A6XGL0 299 aa13.46□□□□□ -0.25
LIMK1-207ENST00000491052 E5RJQ4 531 aa13.46□□□□□ -0.25
LIMK1-207ENST00000491052 E7ENQ6 273 aa13.46□□□□□ -0.25
LIMK1-207ENST00000491052 STK25O00506 426 aa13.46□□□□□ -0.25
LIMK1-207ENST00000491052 FBXO21O94952 628 aa13.46□□□□□ -0.25
LIMK1-207ENST00000491052 PDGFBP01127 241 aaPredicted RBP13.46□□□□□ -0.25
LIMK1-207ENST00000491052 IFNAR2P48551 515 aa13.46□□□□□ -0.25
LIMK1-207ENST00000491052 ZXDBP98169 803 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms