RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 ATXN2LQ8WWM7 1075 aaKnown RBP7.63□□□□□ -1.19
NPHP3-208ENST00000490993 LRRC39Q96DD0 335 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 STAMBPL1Q96FJ0 436 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 PCYT2Q99447 389 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 ZNF670Q9BS34 389 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 DDX43Q9NXZ2 648 aaKnown RBP7.63□□□□□ -1.19
NPHP3-208ENST00000490993 ZFATQ9P243 1243 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 MORF4L1Q9UBU8 362 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 ZFP69BQ9UJL9 534 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 NAALADL1Q9UQQ1 740 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 O00370 1275 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 TM9SF1O15321 606 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 CHADO15335 359 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 SMPD1P17405 629 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 ARFIP2P53365 341 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 IRX4P78413 519 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 LAMB3Q13751 1172 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 MDH1BQ5I0G3 518 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 C1orf220Q5T0J3 134 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 C15orf39Q6ZRI6 1047 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 VPS39Q96JC1 886 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 WDCPQ9H6R7 721 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 KANSL3Q9P2N6 904 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 PEX10O60683 326 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 ARIH2O95376 493 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 ATP4AP20648 1035 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 ACO1P21399 889 aaKnown RBP7.63□□□□□ -1.19
NPHP3-208ENST00000490993 RPL9P32969 192 aaKnown RBP7.63□□□□□ -1.19
NPHP3-208ENST00000490993 TKTL1P51854 596 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 UGP2Q16851 508 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 PTPN20Q4JDL3 420 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 ANKRD20A8PQ5CZ79 823 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 C9orf57Q5W0N0 161 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 HIBCHQ6NVY1 386 aaPredicted RBP7.63□□□□□ -1.19
NPHP3-208ENST00000490993 RGMBQ6NW40 437 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 KLC3Q6P597 504 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 TRPM8Q7Z2W7 1104 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 LRRC6Q86X45 466 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 ATPAF2Q8N5M1 289 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 CEP120Q8N960 986 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 SMARCD1Q96GM5 515 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 NUDCD1Q96RS6 583 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 DDX23Q9BUQ8 820 aaKnown RBP7.63□□□□□ -1.19
NPHP3-208ENST00000490993 PFDN4Q9NQP4 134 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 RGS17Q9UGC6 210 aaPredicted RBP7.63□□□□□ -1.19
NPHP3-208ENST00000490993 Q9Y3F1 56 aa7.63□□□□□ -1.19
NPHP3-208ENST00000490993 PTPN7P35236 360 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 MTA1Q13330 715 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 DPYSL3Q14195 570 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 GEN1Q17RS7 908 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 GJC2Q5T442 439 aaPredicted RBP7.62□□□□□ -1.19
NPHP3-208ENST00000490993 NAPEPLDQ6IQ20 393 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 RAB44Q7Z6P3 723 aaPredicted RBP7.62□□□□□ -1.19
NPHP3-208ENST00000490993 LRRC34Q8IZ02 419 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 C4orf33Q8N1A6 199 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 SLC2A14Q8TDB8 520 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 STK32AQ8WU08 396 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 SCG3Q8WXD2 468 aaKnown RBP7.62□□□□□ -1.19
NPHP3-208ENST00000490993 DDX1Q92499 740 aaKnown RBP7.62□□□□□ -1.19
NPHP3-208ENST00000490993 NKD2Q969F2 451 aaPredicted RBP7.62□□□□□ -1.19
NPHP3-208ENST00000490993 EMID1Q96A84 441 aaPredicted RBP7.62□□□□□ -1.19
NPHP3-208ENST00000490993 UBXN6Q9BZV1 441 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 TXNRD2Q9NNW7 524 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 SDR42E2A6NKP2 422 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 TRDMT1O14717 391 aaKnown RBP7.62□□□□□ -1.19
NPHP3-208ENST00000490993 HOXA2O43364 376 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 LMNAP02545 664 aaKnown RBP7.62□□□□□ -1.19
NPHP3-208ENST00000490993 NOS2P35228 1153 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 CHADLQ6NUI6 762 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 CRELD2Q6UXH1 353 aaPredicted RBP7.62□□□□□ -1.19
NPHP3-208ENST00000490993 SLC26A11Q86WA9 606 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 SCUBE3Q8IX30 993 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 LMNTD2Q8IXW0 634 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 SLC4A11Q8NBS3 891 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 PPHLN1Q8NEY8 458 aaKnown RBP7.62□□□□□ -1.19
NPHP3-208ENST00000490993 SH3TC2Q8TF17 1288 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 RNF157Q96PX1 679 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 PAFAH2Q99487 392 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 KDM4CQ9H3R0 1056 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 GPATCH2LQ9NWQ4 482 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 DDIT4Q9NX09 232 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 AGPSO00116 658 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 OPHN1O60890 802 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 SHOX2O60902 331 aaPredicted RBP7.62□□□□□ -1.19
NPHP3-208ENST00000490993 B3GAT3O94766 335 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 ESRRAP11474 423 aaPredicted RBP7.62□□□□□ -1.19
NPHP3-208ENST00000490993 CPB1P15086 417 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 PTPN1P18031 435 aaKnown RBP7.62□□□□□ -1.19
NPHP3-208ENST00000490993 TAC1P20366 129 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 SAT1P21673 171 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 TYK2P29597 1187 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 AIF1P55008 147 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 MAP3K7CLP57077 242 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 SEPT6Q14141 434 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 UPF1Q92900 1129 aaKnown RBP eCLIP7.62□□□□□ -1.19
NPHP3-208ENST00000490993 SNX27Q96L92 541 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 DDX50Q9BQ39 737 aaKnown RBP7.62□□□□□ -1.19
NPHP3-208ENST00000490993 ELOVL4Q9GZR5 314 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 SIK2Q9H0K1 926 aa7.62□□□□□ -1.19
NPHP3-208ENST00000490993 ECT2Q9H8V3 914 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms