RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	GRIK4	Q16099	956 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	SKIDA1	Q1XH10	827 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	SLC10A6	Q3KNW5	377 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	ARL13B	Q3SXY8	428 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	INTS6L	Q5JSJ4	861 aa	Known RBP	6.61	□□□□□ -1.35
FN1-223	ENST00000490833	EFHC2	Q5JST6	749 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	STXBP5	Q5T5C0	1151 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	FAM102A	Q5T9C2	384 aa	Predicted RBP	6.61	□□□□□ -1.35
FN1-223	ENST00000490833	HHAT	Q5VTY9	493 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	PRAMEF18	Q5VWM3	479 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	KAZN	Q674X7	775 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	NUGGC	Q68CJ6	796 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	LMBRD2	Q68DH5	695 aa	Predicted RBP	6.61	□□□□□ -1.35
FN1-223	ENST00000490833	JADE1	Q6IE81	842 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	TAPT1	Q6NXT6	567 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	C3orf62	Q6ZUJ4	267 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	SLC26A9	Q7LBE3	791 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	CATSPER4	Q7RTX7	472 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	SPATA21	Q7Z572	469 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	TRABD2A	Q86V40	505 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	DNAAF5	Q86Y56	855 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	RFX6	Q8HWS3	928 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	ARHGAP24	Q8N264	748 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	TMEM86A	Q8N2M4	240 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	WDTC1	Q8N5D0	677 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	TOP6BL	Q8N6T0	577 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	ACTL9	Q8TC94	416 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	LRRC8C	Q8TDW0	803 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	CCT6B	Q92526	530 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	MAML1	Q92585	1016 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	C18orf25	Q96B23	403 aa	Predicted RBP	6.61	□□□□□ -1.35
FN1-223	ENST00000490833	PRMT1	Q99873	361 aa	Known RBP	6.61	□□□□□ -1.35
FN1-223	ENST00000490833	FDXACB1	Q9BRP7	624 aa	Predicted RBP	6.61	□□□□□ -1.35
FN1-223	ENST00000490833	REPIN1	Q9BWE0	567 aa	Known RBP	6.61	□□□□□ -1.35
FN1-223	ENST00000490833	AP5M1	Q9H0R1	490 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	SNX25	Q9H3E2	840 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	PLEKHA4	Q9H4M7	779 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	ACSS3	Q9H6R3	686 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	ZWILCH	Q9H900	591 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	VPS37B	Q9H9H4	285 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	SPC25	Q9HBM1	224 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	ACP6	Q9NPH0	428 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	ATP13A2	Q9NQ11	1180 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	CNTN3	Q9P232	1028 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	GTF2IRD1	Q9UHL9	959 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	DNPEP	Q9ULA0	475 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	USH1C	Q9Y6N9	552 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	CAPN7	Q9Y6W3	813 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	SI	P14410	1827 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	COL11A1	P12107	1806 aa	Predicted RBP	6.6	□□□□□ -1.35
FN1-223	ENST00000490833	PTPRJ	Q12913	1337 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	TCRBV7S2A1N4T	A0A589	114 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	MBLAC1	A4D2B0	266 aa	Predicted RBP	6.6	□□□□□ -1.35
FN1-223	ENST00000490833		E7ENQ6	273 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833		J3QL48	77 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	GPR25	O00155	361 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	PDHX	O00330	501 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	TSPAN1	O60635	241 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	GCAT	O75600	419 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	SNUPN	O95149	360 aa	Known RBP	6.6	□□□□□ -1.35
FN1-223	ENST00000490833	ARIH2	O95376	493 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	GJB6	O95452	261 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	LMNA	P02545	664 aa	Known RBP	6.6	□□□□□ -1.35
FN1-223	ENST00000490833	MT-ND3	P03897	115 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	PGK2	P07205	417 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	CXCL8	P10145	99 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	CYP2C9	P11712	490 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	PECAM1	P16284	738 aa	Predicted RBP	6.6	□□□□□ -1.35
FN1-223	ENST00000490833	SMPD1	P17405	629 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	TPSB2	P20231	275 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	MX2	P20592	715 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	MIP	P30301	263 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	RPL9	P32969	192 aa	Known RBP	6.6	□□□□□ -1.35
FN1-223	ENST00000490833	CYP2C18	P33260	490 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	GNL1	P36915	607 aa	Predicted RBP	6.6	□□□□□ -1.35
FN1-223	ENST00000490833	HADHA	P40939	763 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	HCAR3	P49019	387 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	TAF6	P49848	677 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	CLCN3	P51790	818 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	CDH6	P55285	790 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	IFI35	P80217	286 aa	Predicted RBP	6.6	□□□□□ -1.35
FN1-223	ENST00000490833	ZNF200	P98182	395 aa	Predicted RBP	6.6	□□□□□ -1.35
FN1-223	ENST00000490833	ATP11A	P98196	1134 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	OTUD4	Q01804	1114 aa	Known RBP	6.6	□□□□□ -1.35
FN1-223	ENST00000490833	PDIA2	Q13087	525 aa	Known RBP	6.6	□□□□□ -1.35
FN1-223	ENST00000490833	NOMO1	Q15155	1222 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	TPSAB1	Q15661	275 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	MAPRE1	Q15691	268 aa	Known RBP	6.6	□□□□□ -1.35
FN1-223	ENST00000490833	ZRSR2	Q15696	482 aa	Known RBP	6.6	□□□□□ -1.35
FN1-223	ENST00000490833	TBCC	Q15814	346 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	ZBTB6	Q15916	424 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	SNCB	Q16143	134 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	PDK4	Q16654	411 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	AMHR2	Q16671	573 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	LONRF1	Q17RB8	773 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	CCDC142	Q17RM4	750 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	PTPN20	Q4JDL3	420 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	ZNF394	Q53GI3	561 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	ANKRD20A8P	Q5CZ79	823 aa		6.6	□□□□□ -1.35
FN1-223	ENST00000490833	FBXO47	Q5MNV8	452 aa		6.6	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms