RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 LRPAP1P30533 357 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 SOX5P35711 763 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 EIF4A3P38919 411 aaKnown RBP8.04□□□□□ -1.12
CLDN1-202ENST00000490800 NBL1P41271 181 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 STAT1P42224 750 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 GUCY2FP51841 1108 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 ADCY1Q08828 1119 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 ANGPT1Q15389 498 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 SLC5A9Q2M3M2 681 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 C4orf17Q53FE4 359 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 SLC44A4Q53GD3 710 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 TPGS2Q68CL5 300 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 JADE1Q6IE81 842 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 ZNF280DQ6N043 979 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 MTSS1LQ765P7 747 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 ASCL5Q7RTU5 278 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 PRICKLE2Q7Z3G6 844 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 IRF2BP2Q7Z5L9 587 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 CD302Q8IX05 232 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 NPAS3Q8IXF0 933 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 CCAR2Q8N163 923 aaKnown RBP8.04□□□□□ -1.12
CLDN1-202ENST00000490800 APPL2Q8NEU8 664 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 RNF217Q8TC41 542 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 ANKRD36BP1Q96IX9 119 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 NT5C1BQ96P26 610 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 KXD1Q9BQD3 176 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 CORO1BQ9BR76 489 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 DESI2Q9BSY9 194 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 PLA2G2FQ9BZM2 168 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 ASB7Q9H672 318 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 NHEJ1Q9H9Q4 299 aaPredicted RBP8.04□□□□□ -1.12
CLDN1-202ENST00000490800 APOBEC3GQ9HC16 384 aaKnown RBP8.04□□□□□ -1.12
CLDN1-202ENST00000490800 ARHGEF3Q9NR81 526 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 SIX4Q9UIU6 781 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 UBQLN1Q9UMX0 589 aaKnown RBP8.04□□□□□ -1.12
CLDN1-202ENST00000490800 SIT1Q9Y3P8 196 aa8.04□□□□□ -1.12
CLDN1-202ENST00000490800 EPN1Q9Y6I3 576 aaPredicted RBP8.04□□□□□ -1.12
CLDN1-202ENST00000490800 SSU72P8A0A1W2PR75 194 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 TTLL8A6PVC2 850 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 M0QZQ0 153 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 FOXN3O00409 490 aaPredicted RBP8.03□□□□□ -1.12
CLDN1-202ENST00000490800 PPEF2O14830 753 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 GFPT2O94808 682 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 OAZ2O95190 189 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 NDUFA10O95299 355 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 ASS1P00966 412 aaKnown RBP8.03□□□□□ -1.12
CLDN1-202ENST00000490800 CST3P01034 146 aaPredicted RBP8.03□□□□□ -1.12
CLDN1-202ENST00000490800 OR4Q2P0C623 313 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 TMEM191BP0C7N4 346 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 FERP16591 822 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 CEBPBP17676 345 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 CCR2P41597 374 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 PRKCIP41743 596 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 MFAP3P55082 362 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 STARD6P59095 220 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 MYL6P60660 151 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 NOP14P78316 857 aaKnown RBP8.03□□□□□ -1.12
CLDN1-202ENST00000490800 GCNT1Q02742 428 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 ARID5AQ03989 594 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 TWF1Q12792 350 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 POU4F2Q12837 409 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 TMEM132DQ14C87 1099 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 ARHGAP44Q17R89 818 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 ASTE1Q2TB18 679 aaPredicted RBP8.03□□□□□ -1.12
CLDN1-202ENST00000490800 WDR44Q5JSH3 913 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 TANGO2Q6ICL3 276 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 SPOPLQ6IQ16 392 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 DSTYKQ6XUX3 929 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 TRIM46Q7Z4K8 759 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 NT5DC4Q86YG4 428 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 REXO1L1PQ8IX06 675 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 CCDC170Q8IYT3 715 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 PPM1KQ8N3J5 372 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 C1orf127Q8N9H9 656 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 ACRBPQ8NEB7 543 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 OLIG1Q8TAK6 271 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 CXorf38Q8TB03 319 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 SHC3Q92529 594 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 TCEAL4Q96EI5 215 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 SHDQ96IW2 340 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 PPP1R13BQ96KQ4 1090 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 ZNF512Q96ME7 567 aaPredicted RBP8.03□□□□□ -1.12
CLDN1-202ENST00000490800 FOXQ1Q9C009 403 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 PHACTR1Q9C0D0 580 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 AVENQ9NQS1 362 aaPredicted RBP8.03□□□□□ -1.12
CLDN1-202ENST00000490800 TRMT1Q9NXH9 659 aaKnown RBP8.03□□□□□ -1.12
CLDN1-202ENST00000490800 GDE1Q9NZC3 331 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 DLGAP2Q9P1A6 1054 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 AFF4Q9UHB7 1163 aaKnown RBP8.03□□□□□ -1.12
CLDN1-202ENST00000490800 PPP2R2CQ9Y2T4 447 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 DERAQ9Y315 318 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 REXO2Q9Y3B8 237 aaKnown RBP8.03□□□□□ -1.12
CLDN1-202ENST00000490800 C2CD2Q9Y426 696 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 INSL5Q9Y5Q6 135 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 DOCK6Q96HP0 2047 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 VWA8A3KMH1 1905 aa8.03□□□□□ -1.12
CLDN1-202ENST00000490800 CACNA1HO95180 2353 aa8.02□□□□□ -1.13
CLDN1-202ENST00000490800 KANSL1LA0AUZ9 987 aa8.02□□□□□ -1.13
CLDN1-202ENST00000490800 PRR23AA6NEV1 266 aa8.02□□□□□ -1.13
CLDN1-202ENST00000490800 FIGNL2A6NMB9 653 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms