RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 ABCC13Q9NSE7 274 aa13.89□□□□□ -0.19
SNX12-205ENST00000490561 CLIC5Q9NZA1 410 aa13.89□□□□□ -0.19
SNX12-205ENST00000490561 TJP2Q9UDY2 1190 aa13.89□□□□□ -0.19
SNX12-205ENST00000490561 STAP1Q9ULZ2 295 aa13.89□□□□□ -0.19
SNX12-205ENST00000490561 RCCD1A6NED2 376 aa13.88□□□□□ -0.19
SNX12-205ENST00000490561 TMEM191CA6NGB0 347 aa13.88□□□□□ -0.19
SNX12-205ENST00000490561 MYO1FO00160 1098 aa13.88□□□□□ -0.19
SNX12-205ENST00000490561 CAPN9O14815 690 aa13.88□□□□□ -0.19
SNX12-205ENST00000490561 ATMINO43313 823 aaPredicted RBP13.88□□□□□ -0.19
SNX12-205ENST00000490561 KIF5CO60282 957 aa13.88□□□□□ -0.19
SNX12-205ENST00000490561 RALAP11233 206 aa13.88□□□□□ -0.19
SNX12-205ENST00000490561 YWHAGP61981 247 aaKnown RBP eCLIP13.88□□□□□ -0.19
SNX12-205ENST00000490561 IFRD2Q12894 506 aaPredicted RBP13.88□□□□□ -0.19
SNX12-205ENST00000490561 GRIN2CQ14957 1233 aa13.88□□□□□ -0.19
SNX12-205ENST00000490561 ACAP1Q15027 740 aa13.88□□□□□ -0.19
SNX12-205ENST00000490561 C2CD6Q53TS8 623 aa13.88□□□□□ -0.19
SNX12-205ENST00000490561 TCEAL5Q5H9L2 206 aa13.88□□□□□ -0.19
SNX12-205ENST00000490561 BTBD8Q5XKL5 378 aa13.88□□□□□ -0.19
SNX12-205ENST00000490561 DNAAF5Q86Y56 855 aa13.88□□□□□ -0.19
SNX12-205ENST00000490561 SYCE1Q8N0S2 351 aa13.88□□□□□ -0.19
SNX12-205ENST00000490561 ZNF276Q8N554 614 aa13.88□□□□□ -0.19
SNX12-205ENST00000490561 STKLD1Q8NE28 680 aa13.88□□□□□ -0.19
SNX12-205ENST00000490561 FAM149B1Q96BN6 582 aa13.88□□□□□ -0.19
SNX12-205ENST00000490561 MCEEQ96PE7 176 aa13.88□□□□□ -0.19
SNX12-205ENST00000490561 SLC2A13Q96QE2 648 aa13.88□□□□□ -0.19
SNX12-205ENST00000490561 PRKD2Q9BZL6 878 aa13.88□□□□□ -0.19
SNX12-205ENST00000490561 LZTFL1Q9NQ48 299 aa13.88□□□□□ -0.19
SNX12-205ENST00000490561 ASAH2Q9NR71 780 aa13.88□□□□□ -0.19
SNX12-205ENST00000490561 OLA1Q9NTK5 396 aaKnown RBP13.88□□□□□ -0.19
SNX12-205ENST00000490561 TRMT1Q9NXH9 659 aaKnown RBP13.88□□□□□ -0.19
SNX12-205ENST00000490561 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.88□□□□□ -0.19
SNX12-205ENST00000490561 TRPM5Q9NZQ8 1165 aa13.88□□□□□ -0.19
SNX12-205ENST00000490561 IP6K2Q9UHH9 426 aa13.88□□□□□ -0.19
SNX12-205ENST00000490561 ANAPC7Q9UJX3 599 aa13.88□□□□□ -0.19
SNX12-205ENST00000490561 TMEM59LQ9UK28 342 aa13.88□□□□□ -0.19
SNX12-205ENST00000490561 GUCA1BQ9UMX6 200 aa13.88□□□□□ -0.19
SNX12-205ENST00000490561 MAGED2Q9UNF1 606 aaPredicted RBP13.88□□□□□ -0.19
SNX12-205ENST00000490561 MYH10P35580 1976 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 PLXNA3P51805 1871 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 MACROD2A1Z1Q3 448 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 YJEFN3A6XGL0 299 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 SOBPA7XYQ1 873 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 E7ENQ6 273 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 SOX1O00570 391 aaPredicted RBP13.87□□□□□ -0.19
SNX12-205ENST00000490561 DPYSL4O14531 572 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 TUBB4AP04350 444 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 ZDHHC11BP0C7U3 371 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 HMGA1P17096 107 aaKnown RBP13.87□□□□□ -0.19
SNX12-205ENST00000490561 HOXB8P17481 243 aaPredicted RBP13.87□□□□□ -0.19
SNX12-205ENST00000490561 PTPN2P17706 415 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 PFKLP17858 780 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 GPD1P21695 349 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 CDC25CP30307 473 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 SDC4P31431 198 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 MAN1A1P33908 653 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 NOS2P35228 1153 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 MATKP42679 507 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 TUBP50607 506 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 USP46P62068 366 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 HYAL1Q12794 435 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 TAF10Q12962 218 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 KCNC3Q14003 757 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 PIGHQ14442 188 aaPredicted RBP13.87□□□□□ -0.19
SNX12-205ENST00000490561 SNX30Q5VWJ9 437 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 C11orf63Q6NUN7 778 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 LLGL2Q6P1M3 1020 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 TRIM58Q8NG06 486 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 GPR152Q8TDT2 470 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 CLEC4CQ8WTT0 213 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 GMIPQ9P107 970 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 ZMYM5Q9UJ78 669 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 MTCH2Q9Y6C9 303 aa13.87□□□□□ -0.19
SNX12-205ENST00000490561 FAM170AA1A519 330 aa13.86□□□□□ -0.19
SNX12-205ENST00000490561 C2CD4BA6NLJ0 364 aa13.86□□□□□ -0.19
SNX12-205ENST00000490561 CCL16O15467 120 aa13.86□□□□□ -0.19
SNX12-205ENST00000490561 PDGFRAP16234 1089 aa13.86□□□□□ -0.19
SNX12-205ENST00000490561 DDX6P26196 483 aaKnown RBP eCLIP13.86□□□□□ -0.192e-6■■□□□ 14.5
SNX12-205ENST00000490561 SLC1A1P43005 524 aa13.86□□□□□ -0.19
SNX12-205ENST00000490561 PTPN9P43378 593 aa13.86□□□□□ -0.19
SNX12-205ENST00000490561 ZNF143P52747 638 aaPredicted RBP13.86□□□□□ -0.19
SNX12-205ENST00000490561 EPHA5P54756 1037 aa13.86□□□□□ -0.19
SNX12-205ENST00000490561 MTMR3Q13615 1198 aa13.86□□□□□ -0.19
SNX12-205ENST00000490561 BSPRYQ5W0U4 402 aa13.86□□□□□ -0.19
SNX12-205ENST00000490561 BHLHA9Q7RTU4 235 aa13.86□□□□□ -0.19
SNX12-205ENST00000490561 PHLDB2Q86SQ0 1253 aa13.86□□□□□ -0.19
SNX12-205ENST00000490561 NIPA2Q8N8Q9 360 aa13.86□□□□□ -0.19
SNX12-205ENST00000490561 TPCN2Q8NHX9 752 aa13.86□□□□□ -0.19
SNX12-205ENST00000490561 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.86□□□□□ -0.19
SNX12-205ENST00000490561 RNF139Q8WU17 664 aa13.86□□□□□ -0.19
SNX12-205ENST00000490561 CNPY3Q9BT09 278 aa13.86□□□□□ -0.19
SNX12-205ENST00000490561 DDX23Q9BUQ8 820 aaKnown RBP13.86□□□□□ -0.19
SNX12-205ENST00000490561 IGFLR1Q9H665 355 aa13.86□□□□□ -0.19
SNX12-205ENST00000490561 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.86□□□□□ -0.19
SNX12-205ENST00000490561 MTCL1Q9Y4B5 1905 aaKnown RBP13.86□□□□□ -0.19
SNX12-205ENST00000490561 CCDC195A0A1B0GUA6 201 aa13.85□□□□□ -0.19
SNX12-205ENST00000490561 A0A1W2PQH9 124 aa13.85□□□□□ -0.19
SNX12-205ENST00000490561 KIF2AO00139 706 aaPredicted RBP13.85□□□□□ -0.19
SNX12-205ENST00000490561 ZNF197O14709 1029 aa13.85□□□□□ -0.19
SNX12-205ENST00000490561 BUB1O43683 1085 aa13.85□□□□□ -0.19
SNX12-205ENST00000490561 PROSCO94903 275 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms