RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 TTC39CQ8N584 583 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 CCDC150Q8NCX0 1101 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 RIN3Q8TB24 985 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 USP33Q8TEY7 942 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 NELFBQ8WX92 580 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 FAXDC2Q96IV6 333 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 CNOT6LQ96LI5 555 aaKnown RBP10.97□□□□□ -0.65
TTC28-207ENST00000490475 HHIPQ96QV1 700 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 PNKPQ96T60 521 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 TSG101Q99816 390 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 NACA2Q9H009 215 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 ARRDC1-AS1Q9H2J1 176 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 FBRSL1Q9HCM7 1045 aaKnown RBP10.97□□□□□ -0.65
TTC28-207ENST00000490475 POLMQ9NP87 494 aaPredicted RBP10.97□□□□□ -0.65
TTC28-207ENST00000490475 C2orf42Q9NWW7 574 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 MMP17Q9ULZ9 603 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 SH3BP1Q9Y3L3 701 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 CACNA1BQ00975 2339 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 EML5Q05BV3 1969 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 MYO16Q9Y6X6 1858 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 KIAA1549LQ6ZVL6 1849 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 A0A0A0MRY4 1105 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 FAM92AA1XBS5 289 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 GOLGA6L22H0YM25 854 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 PSMA7O14818 248 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 ZBTB24O43167 697 aaPredicted RBP10.96□□□□□ -0.65
TTC28-207ENST00000490475 VNN1O95497 513 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 CYP17A1P05093 508 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 ADH5P11766 374 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 KRT13P13646 458 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 MPLP40238 635 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 OPRD1P41143 372 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 GRIA2P42262 883 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 TNFRSF4P43489 277 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 GCLMP48507 274 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 FKBP3Q00688 224 aaKnown RBP10.96□□□□□ -0.65
TTC28-207ENST00000490475 GAD2Q05329 585 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 PPP3CAQ08209 521 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 E2F5Q15329 346 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 CCDC142Q17RM4 750 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 ZACNQ401N2 412 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 PPM1JQ5JR12 505 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 SPDYCQ5MJ68 293 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 EOGTQ5NDL2 527 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 PLA2G2CQ5R387 149 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 INTS8Q75QN2 995 aaKnown RBP10.96□□□□□ -0.65
TTC28-207ENST00000490475 SV2AQ7L0J3 742 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 TADA2BQ86TJ2 420 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 FAM35AQ86V20 835 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 RASSF3Q86WH2 238 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 ZC3H3Q8IXZ2 948 aaKnown RBP10.96□□□□□ -0.65
TTC28-207ENST00000490475 CRYBG2Q8N1P7 616 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 SPACA7Q96KW9 195 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 B3GNT5Q9BYG0 378 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 ZNF518BQ9C0D4 1074 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 RNF38Q9H0F5 515 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 NUP62CLQ9H1M0 184 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 LINC00597Q9H2U6 94 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 FAM124BQ9H5Z6 455 aaPredicted RBP10.96□□□□□ -0.65
TTC28-207ENST00000490475 PNPLA8Q9NP80 782 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.96□□□□□ -0.652e-12■■■■■ 298.1
TTC28-207ENST00000490475 TLR8Q9NR97 1041 aaKnown RBP10.96□□□□□ -0.65
TTC28-207ENST00000490475 IL37Q9NZH6 218 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 CFAP97Q9P2B7 532 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 CTNND2Q9UQB3 1225 aa10.96□□□□□ -0.65
TTC28-207ENST00000490475 AP1G2O75843 785 aa10.95□□□□□ -0.66
TTC28-207ENST00000490475 KAT7O95251 611 aa10.95□□□□□ -0.66
TTC28-207ENST00000490475 GBP1P32455 592 aa10.95□□□□□ -0.66
TTC28-207ENST00000490475 PXNP49023 591 aaPredicted RBP10.95□□□□□ -0.66
TTC28-207ENST00000490475 PSEN1P49768 467 aa10.95□□□□□ -0.66
TTC28-207ENST00000490475 SLC5A3P53794 718 aa10.95□□□□□ -0.66
TTC28-207ENST00000490475 MCCD1P59942 119 aaPredicted RBP10.95□□□□□ -0.66
TTC28-207ENST00000490475 LRRC63Q05C16 580 aa10.95□□□□□ -0.66
TTC28-207ENST00000490475 IFRD2Q12894 506 aaPredicted RBP10.95□□□□□ -0.66
TTC28-207ENST00000490475 CRY1Q16526 586 aa10.95□□□□□ -0.66
TTC28-207ENST00000490475 TTI2Q6NXR4 508 aa10.95□□□□□ -0.66
TTC28-207ENST00000490475 TRIML1Q8N9V2 468 aa10.95□□□□□ -0.66
TTC28-207ENST00000490475 WHAMMQ8TF30 809 aa10.95□□□□□ -0.66
TTC28-207ENST00000490475 CDK5RAP1Q96SZ6 601 aaKnown RBP10.95□□□□□ -0.66
TTC28-207ENST00000490475 DUSP15Q9H1R2 295 aaPredicted RBP10.95□□□□□ -0.66
TTC28-207ENST00000490475 DPEP3Q9H4B8 488 aa10.95□□□□□ -0.66
TTC28-207ENST00000490475 MMRN2Q9H8L6 949 aa10.95□□□□□ -0.66
TTC28-207ENST00000490475 CYP3A43Q9HB55 503 aa10.95□□□□□ -0.66
TTC28-207ENST00000490475 CSNK1G1Q9HCP0 422 aa10.95□□□□□ -0.66
TTC28-207ENST00000490475 ARHGEF4Q9NR80 690 aa10.95□□□□□ -0.66
TTC28-207ENST00000490475 SMPD4Q9NXE4 827 aa10.95□□□□□ -0.66
TTC28-207ENST00000490475 LSM7Q9UK45 103 aaKnown RBP10.95□□□□□ -0.66
TTC28-207ENST00000490475 MYO18AQ92614 2054 aaKnown RBP10.95□□□□□ -0.66
TTC28-207ENST00000490475 NUP205Q92621 2012 aa10.95□□□□□ -0.66
TTC28-207ENST00000490475 EPG5Q9HCE0 2579 aa10.95□□□□□ -0.66
TTC28-207ENST00000490475 THADAQ6YHU6 1953 aa10.94□□□□□ -0.66
TTC28-207ENST00000490475 BCLAF3A2AJT9 711 aaKnown RBP10.94□□□□□ -0.66
TTC28-207ENST00000490475 K7EQS6 105 aa10.94□□□□□ -0.66
TTC28-207ENST00000490475 CLDN5O00501 218 aa10.94□□□□□ -0.66
TTC28-207ENST00000490475 TNFRSF10BO14763 440 aa10.94□□□□□ -0.66
TTC28-207ENST00000490475 HOXC11O43248 304 aaPredicted RBP10.94□□□□□ -0.66
TTC28-207ENST00000490475 COCHO43405 550 aa10.94□□□□□ -0.66
TTC28-207ENST00000490475 STX10O60499 249 aa10.94□□□□□ -0.66
TTC28-207ENST00000490475 CAVIN2O95810 425 aa10.94□□□□□ -0.66
TTC28-207ENST00000490475 ASS1P00966 412 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms