RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 EZH1Q92800 747 aaPredicted RBP19.11■□□□□ 0.65
COL9A3-214ENST00000490398 MSANTD3Q96H12 275 aa19.11■□□□□ 0.65
COL9A3-214ENST00000490398 PIEZO1Q92508 2521 aa19.1■□□□□ 0.65
COL9A3-214ENST00000490398 HELZP42694 1942 aaKnown RBP19.1■□□□□ 0.65
COL9A3-214ENST00000490398 GREM1O60565 184 aa19.1■□□□□ 0.65
COL9A3-214ENST00000490398 GABBR2O75899 941 aa19.1■□□□□ 0.65
COL9A3-214ENST00000490398 IRF1P10914 325 aa19.1■□□□□ 0.65
COL9A3-214ENST00000490398 VDRP11473 427 aa19.1■□□□□ 0.65
COL9A3-214ENST00000490398 RARGP13631 454 aa19.1■□□□□ 0.65
COL9A3-214ENST00000490398 BRD2P25440 801 aaKnown RBP19.1■□□□□ 0.65
COL9A3-214ENST00000490398 TUBP50607 506 aa19.1■□□□□ 0.65
COL9A3-214ENST00000490398 GALK1P51570 392 aa19.1■□□□□ 0.65
COL9A3-214ENST00000490398 ZNF132P52740 706 aa19.1■□□□□ 0.65
COL9A3-214ENST00000490398 PKDCCQ504Y2 493 aa19.1■□□□□ 0.65
COL9A3-214ENST00000490398 TMEM196Q5HYL7 178 aa19.1■□□□□ 0.65
COL9A3-214ENST00000490398 RAB41Q5JT25 222 aa19.1■□□□□ 0.65
COL9A3-214ENST00000490398 RBM43Q6ZSC3 357 aaKnown RBP19.1■□□□□ 0.65
COL9A3-214ENST00000490398 BHLHA9Q7RTU4 235 aa19.1■□□□□ 0.65
COL9A3-214ENST00000490398 RBBP8NLQ8NC74 664 aaPredicted RBP19.1■□□□□ 0.65
COL9A3-214ENST00000490398 ACP6Q9NPH0 428 aa19.1■□□□□ 0.65
COL9A3-214ENST00000490398 TLR8Q9NR97 1041 aaKnown RBP19.1■□□□□ 0.65
COL9A3-214ENST00000490398 SAMSN1Q9NSI8 373 aaKnown RBP19.1■□□□□ 0.65
COL9A3-214ENST00000490398 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.1■□□□□ 0.65
COL9A3-214ENST00000490398 POLR3BQ9NW08 1133 aaPredicted RBP19.1■□□□□ 0.65
COL9A3-214ENST00000490398 AJAP1Q9UKB5 411 aaPredicted RBP19.1■□□□□ 0.65
COL9A3-214ENST00000490398 LAMTOR5O43504 91 aa19.09■□□□□ 0.65
COL9A3-214ENST00000490398 EGFP01133 1207 aa19.09■□□□□ 0.65
COL9A3-214ENST00000490398 CYP17A1P05093 508 aa19.09■□□□□ 0.65
COL9A3-214ENST00000490398 NBL1P41271 181 aa19.09■□□□□ 0.65
COL9A3-214ENST00000490398 MAGEA9P43362 315 aa19.09■□□□□ 0.65
COL9A3-214ENST00000490398 MTIF2P46199 727 aaKnown RBP19.09■□□□□ 0.65
COL9A3-214ENST00000490398 YWHAEP62258 255 aaKnown RBP19.09■□□□□ 0.65
COL9A3-214ENST00000490398 SATB1Q01826 763 aa19.09■□□□□ 0.65
COL9A3-214ENST00000490398 GCNT1Q02742 428 aa19.09■□□□□ 0.65
COL9A3-214ENST00000490398 CSTF1Q05048 431 aaKnown RBP19.09■□□□□ 0.65
COL9A3-214ENST00000490398 CETN1Q12798 172 aa19.09■□□□□ 0.65
COL9A3-214ENST00000490398 CCDC186Q7Z3E2 898 aa19.09■□□□□ 0.65
COL9A3-214ENST00000490398 ADGRG2Q8IZP9 1017 aa19.09■□□□□ 0.65
COL9A3-214ENST00000490398 CPA6Q8N4T0 437 aa19.09■□□□□ 0.65
COL9A3-214ENST00000490398 ATP2A3Q93084 1043 aa19.09■□□□□ 0.65
COL9A3-214ENST00000490398 KLF16Q9BXK1 252 aaPredicted RBP19.09■□□□□ 0.65
COL9A3-214ENST00000490398 ULBP1Q9BZM6 244 aa19.09■□□□□ 0.65
COL9A3-214ENST00000490398 UBXN6Q9BZV1 441 aa19.09■□□□□ 0.65
COL9A3-214ENST00000490398 THAP9Q9H5L6 903 aa19.09■□□□□ 0.65
COL9A3-214ENST00000490398 UBE2TQ9NPD8 197 aaPredicted RBP19.09■□□□□ 0.65
COL9A3-214ENST00000490398 CYLDQ9NQC7 956 aa19.09■□□□□ 0.65
COL9A3-214ENST00000490398 TRDMT1O14717 391 aaKnown RBP19.08■□□□□ 0.64
COL9A3-214ENST00000490398 PAEPP09466 180 aa19.08■□□□□ 0.64
COL9A3-214ENST00000490398 TDGF1P13385 188 aa19.08■□□□□ 0.64
COL9A3-214ENST00000490398 ERCC5P28715 1186 aaPredicted RBP19.08■□□□□ 0.64
COL9A3-214ENST00000490398 TKTL1P51854 596 aa19.08■□□□□ 0.64
COL9A3-214ENST00000490398 MESP2Q0VG99 397 aa19.08■□□□□ 0.64
COL9A3-214ENST00000490398 TPD52L1Q16890 204 aaPredicted RBP19.08■□□□□ 0.64
COL9A3-214ENST00000490398 MIIPQ5JXC2 388 aa19.08■□□□□ 0.64
COL9A3-214ENST00000490398 TRIM65Q6PJ69 517 aa19.08■□□□□ 0.64
COL9A3-214ENST00000490398 RHBDF2Q6PJF5 856 aa19.08■□□□□ 0.64
COL9A3-214ENST00000490398 LCLAT1Q6UWP7 414 aa19.08■□□□□ 0.64
COL9A3-214ENST00000490398 ASCL5Q7RTU5 278 aa19.08■□□□□ 0.64
COL9A3-214ENST00000490398 BBS7Q8IWZ6 715 aa19.08■□□□□ 0.64
COL9A3-214ENST00000490398 DNAI2Q9GZS0 605 aa19.08■□□□□ 0.64
COL9A3-214ENST00000490398 IRF2BPLQ9H1B7 796 aa19.08■□□□□ 0.64
COL9A3-214ENST00000490398 PRMT8Q9NR22 394 aaPredicted RBP19.08■□□□□ 0.64
COL9A3-214ENST00000490398 NAGPAQ9UK23 515 aa19.08■□□□□ 0.64
COL9A3-214ENST00000490398 MYH10P35580 1976 aa19.07■□□□□ 0.64
COL9A3-214ENST00000490398 PROB1E7EW31 1015 aa19.07■□□□□ 0.64
COL9A3-214ENST00000490398 PIK3R2O00459 728 aa19.07■□□□□ 0.64
COL9A3-214ENST00000490398 XPO1O14980 1071 aaKnown RBP19.07■□□□□ 0.64
COL9A3-214ENST00000490398 OPRD1P41143 372 aa19.07■□□□□ 0.64
COL9A3-214ENST00000490398 SLC6A11P48066 632 aa19.07■□□□□ 0.64
COL9A3-214ENST00000490398 RGS7P49802 495 aa19.07■□□□□ 0.64
COL9A3-214ENST00000490398 BCAT1P54687 386 aa19.07■□□□□ 0.64
COL9A3-214ENST00000490398 BST2Q10589 180 aaKnown RBP19.07■□□□□ 0.64
COL9A3-214ENST00000490398 DHCR24Q15392 516 aa19.07■□□□□ 0.64
COL9A3-214ENST00000490398 DPY19L2P1Q6NXN4 242 aa19.07■□□□□ 0.64
COL9A3-214ENST00000490398 C1orf228Q6PIY5 440 aa19.07■□□□□ 0.64
COL9A3-214ENST00000490398 C11orf57Q6ZUT1 292 aaPredicted RBP19.07■□□□□ 0.64
COL9A3-214ENST00000490398 SFTPA1Q8IWL2 248 aa19.07■□□□□ 0.64
COL9A3-214ENST00000490398 P2RY13Q9BPV8 354 aa19.07■□□□□ 0.64
COL9A3-214ENST00000490398 NACA2Q9H009 215 aa19.07■□□□□ 0.64
COL9A3-214ENST00000490398 SIX2Q9NPC8 291 aa19.07■□□□□ 0.64
COL9A3-214ENST00000490398 FBXO4Q9UKT5 387 aa19.07■□□□□ 0.64
COL9A3-214ENST00000490398 KIAA1257Q9ULG3 409 aa19.07■□□□□ 0.64
COL9A3-214ENST00000490398 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.07■□□□□ 0.64
COL9A3-214ENST00000490398 CNTN6Q9UQ52 1028 aa19.07■□□□□ 0.64
COL9A3-214ENST00000490398 MYO16Q9Y6X6 1858 aa19.07■□□□□ 0.64
COL9A3-214ENST00000490398 E2F8A0AVK6 867 aa19.06■□□□□ 0.64
COL9A3-214ENST00000490398 BECN2A8MW95 431 aa19.06■□□□□ 0.64
COL9A3-214ENST00000490398 NFATC1O95644 943 aa19.06■□□□□ 0.64
COL9A3-214ENST00000490398 PON1P27169 355 aa19.06■□□□□ 0.64
COL9A3-214ENST00000490398 ATP5C1P36542 298 aaKnown RBP19.06■□□□□ 0.64
COL9A3-214ENST00000490398 DMWDQ09019 674 aa19.06■□□□□ 0.64
COL9A3-214ENST00000490398 LRRC32Q14392 662 aa19.06■□□□□ 0.64
COL9A3-214ENST00000490398 CNGA2Q16280 664 aa19.06■□□□□ 0.64
COL9A3-214ENST00000490398 DGKKQ5KSL6 1271 aa19.06■□□□□ 0.64
COL9A3-214ENST00000490398 PMF1Q6P1K2 205 aa19.06■□□□□ 0.64
COL9A3-214ENST00000490398 GBP6Q6ZN66 633 aa19.06■□□□□ 0.64
COL9A3-214ENST00000490398 C12orf40Q86WS4 652 aa19.06■□□□□ 0.64
COL9A3-214ENST00000490398 SLC35F5Q8WV83 523 aa19.06■□□□□ 0.64
COL9A3-214ENST00000490398 SECISBP2LQ93073 1101 aaKnown RBP19.06■□□□□ 0.64
COL9A3-214ENST00000490398 P2RY11Q96G91 374 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms