RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 PCK1P35558 622 aa21.85■■□□□ 1.09
SND1-214ENST00000489417 GJC1P36383 396 aa21.85■■□□□ 1.09
SND1-214ENST00000489417 TUFMP49411 452 aaKnown RBP21.85■■□□□ 1.09
SND1-214ENST00000489417 ATP11AP98196 1134 aa21.85■■□□□ 1.09
SND1-214ENST00000489417 HADHQ16836 314 aaKnown RBP21.85■■□□□ 1.09
SND1-214ENST00000489417 CCDC181Q5TID7 509 aa21.85■■□□□ 1.09
SND1-214ENST00000489417 TMC7Q7Z402 723 aa21.85■■□□□ 1.09
SND1-214ENST00000489417 CEP112Q8N8E3 955 aa21.85■■□□□ 1.09
SND1-214ENST00000489417 FBXO44Q9H4M3 255 aa21.85■■□□□ 1.09
SND1-214ENST00000489417 PLXNA4Q9HCM2 1894 aa21.85■■□□□ 1.09
SND1-214ENST00000489417 TEX28O15482 410 aa21.84■■□□□ 1.09
SND1-214ENST00000489417 CXCL14O95715 111 aa21.84■■□□□ 1.09
SND1-214ENST00000489417 RB1P06400 928 aa21.84■■□□□ 1.09
SND1-214ENST00000489417 CA3P07451 260 aa21.84■■□□□ 1.09
SND1-214ENST00000489417 ATF2P15336 505 aa21.84■■□□□ 1.09
SND1-214ENST00000489417 NOS2P35228 1153 aa21.84■■□□□ 1.09
SND1-214ENST00000489417 PAFAH1B1P43034 410 aa21.84■■□□□ 1.09
SND1-214ENST00000489417 CDO1Q16878 200 aa21.84■■□□□ 1.09
SND1-214ENST00000489417 SH3PXD2AQ5TCZ1 1133 aa21.84■■□□□ 1.09
SND1-214ENST00000489417 STKLD1Q8NE28 680 aa21.84■■□□□ 1.09
SND1-214ENST00000489417 MNS1Q8NEH6 495 aa21.84■■□□□ 1.09
SND1-214ENST00000489417 SPPL3Q8TCT6 385 aa21.84■■□□□ 1.09
SND1-214ENST00000489417 FAM172AQ8WUF8 416 aa21.84■■□□□ 1.09
SND1-214ENST00000489417 MS4A14Q96JA4 679 aa21.84■■□□□ 1.09
SND1-214ENST00000489417 CEP295NLQ96MC4 621 aa21.84■■□□□ 1.09
SND1-214ENST00000489417 SAMD11Q96NU1 681 aa21.84■■□□□ 1.09
SND1-214ENST00000489417 GDF15Q99988 308 aa21.84■■□□□ 1.09
SND1-214ENST00000489417 NCAPGQ9BPX3 1015 aa21.84■■□□□ 1.09
SND1-214ENST00000489417 C11orf84Q9BUA3 381 aaPredicted RBP21.84■■□□□ 1.09
SND1-214ENST00000489417 TRIM62Q9BVG3 475 aa21.84■■□□□ 1.09
SND1-214ENST00000489417 ALG13Q9NP73 1137 aaKnown RBP21.84■■□□□ 1.09
SND1-214ENST00000489417 NGRNQ9NPE2 291 aaKnown RBP21.84■■□□□ 1.09
SND1-214ENST00000489417 COMMD8Q9NX08 183 aa21.84■■□□□ 1.09
SND1-214ENST00000489417 STAP1Q9ULZ2 295 aa21.84■■□□□ 1.09
SND1-214ENST00000489417 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.83■■□□□ 1.09
SND1-214ENST00000489417 CAPN9O14815 690 aa21.83■■□□□ 1.09
SND1-214ENST00000489417 RTN3O95197 1032 aaPredicted RBP21.83■■□□□ 1.09
SND1-214ENST00000489417 SEC24AO95486 1093 aa21.83■■□□□ 1.09
SND1-214ENST00000489417 FYNP06241 537 aa21.83■■□□□ 1.09
SND1-214ENST00000489417 MIPP30301 263 aa21.83■■□□□ 1.09
SND1-214ENST00000489417 SULT1E1P49888 294 aa21.83■■□□□ 1.09
SND1-214ENST00000489417 SLC25A11Q02978 314 aaKnown RBP21.83■■□□□ 1.09
SND1-214ENST00000489417 UBE3AQ05086 875 aa21.83■■□□□ 1.09
SND1-214ENST00000489417 ZNF211Q13398 564 aaPredicted RBP21.83■■□□□ 1.09
SND1-214ENST00000489417 DCAF6Q58WW2 860 aa21.83■■□□□ 1.09
SND1-214ENST00000489417 DENND5BQ6ZUT9 1274 aa21.83■■□□□ 1.09
SND1-214ENST00000489417 KATNAL2Q8IYT4 538 aa21.83■■□□□ 1.09
SND1-214ENST00000489417 RASGEF1CQ8N431 466 aa21.83■■□□□ 1.09
SND1-214ENST00000489417 GPR152Q8TDT2 470 aa21.83■■□□□ 1.09
SND1-214ENST00000489417 CENPIQ92674 756 aaPredicted RBP21.83■■□□□ 1.09
SND1-214ENST00000489417 TBCBQ99426 244 aa21.83■■□□□ 1.09
SND1-214ENST00000489417 ENTPD7Q9NQZ7 604 aa21.83■■□□□ 1.09
SND1-214ENST00000489417 IL37Q9NZH6 218 aa21.83■■□□□ 1.09
SND1-214ENST00000489417 EHD2Q9NZN4 543 aa21.83■■□□□ 1.09
SND1-214ENST00000489417 MAFFQ9ULX9 164 aa21.83■■□□□ 1.09
SND1-214ENST00000489417 SCML2Q9UQR0 700 aa21.83■■□□□ 1.09
SND1-214ENST00000489417 PDE2AO00408 941 aaPredicted RBP21.82■■□□□ 1.08
SND1-214ENST00000489417 CNPP09543 421 aaKnown RBP21.82■■□□□ 1.08
SND1-214ENST00000489417 ATF6P18850 670 aa21.82■■□□□ 1.08
SND1-214ENST00000489417 TFE3P19532 575 aaPredicted RBP21.82■■□□□ 1.08
SND1-214ENST00000489417 SLC25A52Q3SY17 297 aa21.82■■□□□ 1.08
SND1-214ENST00000489417 RAB6CQ53S08 254 aa21.82■■□□□ 1.08
SND1-214ENST00000489417 SEL1L2Q5TEA6 688 aa21.82■■□□□ 1.08
SND1-214ENST00000489417 BSPRYQ5W0U4 402 aa21.82■■□□□ 1.08
SND1-214ENST00000489417 BEND5Q7L4P6 421 aa21.82■■□□□ 1.08
SND1-214ENST00000489417 STRADAQ7RTN6 431 aa21.82■■□□□ 1.08
SND1-214ENST00000489417 POLNQ7Z5Q5 900 aa21.82■■□□□ 1.08
SND1-214ENST00000489417 SPRED2Q7Z698 418 aa21.82■■□□□ 1.08
SND1-214ENST00000489417 ACTRT1Q8TDG2 376 aa21.82■■□□□ 1.08
SND1-214ENST00000489417 POF1BQ8WVV4 589 aa21.82■■□□□ 1.08
SND1-214ENST00000489417 NPY6RQ99463 290 aa21.82■■□□□ 1.08
SND1-214ENST00000489417 TCF25Q9BQ70 676 aa21.82■■□□□ 1.08
SND1-214ENST00000489417 RAB6CQ9H0N0 254 aa21.82■■□□□ 1.08
SND1-214ENST00000489417 CYP4F11Q9HBI6 524 aa21.82■■□□□ 1.08
SND1-214ENST00000489417 DDX56Q9NY93 547 aaKnown RBP21.82■■□□□ 1.08
SND1-214ENST00000489417 SMARCAL1Q9NZC9 954 aa21.82■■□□□ 1.08
SND1-214ENST00000489417 MTUS1Q9ULD2 1270 aa21.82■■□□□ 1.08
SND1-214ENST00000489417 USP18Q9UMW8 372 aa21.82■■□□□ 1.08
SND1-214ENST00000489417 NAALADL1Q9UQQ1 740 aa21.82■■□□□ 1.08
SND1-214ENST00000489417 SLC38A8A6NNN8 435 aa21.81■■□□□ 1.08
SND1-214ENST00000489417 PGRMC1O00264 195 aaKnown RBP21.81■■□□□ 1.08
SND1-214ENST00000489417 TRUB2O95900 331 aaKnown RBP21.81■■□□□ 1.08
SND1-214ENST00000489417 KRT7P08729 469 aa21.81■■□□□ 1.08
SND1-214ENST00000489417 PYGMP11217 842 aa21.81■■□□□ 1.08
SND1-214ENST00000489417 NCAM1P13591 858 aa21.81■■□□□ 1.08
SND1-214ENST00000489417 YWHAQP27348 245 aa21.81■■□□□ 1.08
SND1-214ENST00000489417 ELF1P32519 619 aa21.81■■□□□ 1.08
SND1-214ENST00000489417 ERVFC1P60507 584 aa21.81■■□□□ 1.08
SND1-214ENST00000489417 YWHAGP61981 247 aaKnown RBP eCLIP21.81■■□□□ 1.08
SND1-214ENST00000489417 USP46P62068 366 aa21.81■■□□□ 1.08
SND1-214ENST00000489417 SMC1AQ14683 1233 aaKnown RBP21.81■■□□□ 1.08
SND1-214ENST00000489417 SYPL2Q5VXT5 272 aa21.81■■□□□ 1.08
SND1-214ENST00000489417 TXNRD3NBQ6F5E7 133 aa21.81■■□□□ 1.08
SND1-214ENST00000489417 GIPC2Q8TF65 315 aa21.81■■□□□ 1.08
SND1-214ENST00000489417 NT5C3BQ969T7 300 aa21.81■■□□□ 1.08
SND1-214ENST00000489417 TGS1Q96RS0 853 aaKnown RBP21.81■■□□□ 1.08
SND1-214ENST00000489417 ZWILCHQ9H900 591 aa21.81■■□□□ 1.08
SND1-214ENST00000489417 RRN3Q9NYV6 651 aa21.81■■□□□ 1.08
SND1-214ENST00000489417 PCSK1NQ9UHG2 260 aa21.81■■□□□ 1.08
SND1-214ENST00000489417 TTC7AQ9ULT0 858 aaPredicted RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms