RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 MBD3L3A6NE82 208 aaPredicted RBP4.18□□□□□ -1.74
CBWD1-216ENST00000489272 CCP110O43303 1012 aa4.18□□□□□ -1.74
CBWD1-216ENST00000489272 AKAP10O43572 662 aa4.18□□□□□ -1.74
CBWD1-216ENST00000489272 PRF1P14222 555 aa4.18□□□□□ -1.74
CBWD1-216ENST00000489272 CREB1P16220 341 aa4.18□□□□□ -1.74
CBWD1-216ENST00000489272 ANAPC15P60006 121 aa4.18□□□□□ -1.74
CBWD1-216ENST00000489272 HTRA4P83105 476 aaPredicted RBP4.18□□□□□ -1.74
CBWD1-216ENST00000489272 ZNF91Q05481 1191 aa4.18□□□□□ -1.74
CBWD1-216ENST00000489272 HYAL1Q12794 435 aa4.18□□□□□ -1.74
CBWD1-216ENST00000489272 AWAT1Q58HT5 328 aa4.18□□□□□ -1.74
CBWD1-216ENST00000489272 VSTM1Q6UX27 236 aa4.18□□□□□ -1.74
CBWD1-216ENST00000489272 NPNTQ6UXI9 565 aa4.18□□□□□ -1.74
CBWD1-216ENST00000489272 DCDC5Q6ZRR9 648 aa4.18□□□□□ -1.74
CBWD1-216ENST00000489272 MAEAQ7L5Y9 396 aa4.18□□□□□ -1.74
CBWD1-216ENST00000489272 IRF2BP2Q7Z5L9 587 aa4.18□□□□□ -1.74
CBWD1-216ENST00000489272 LINC01465Q8N7H1 131 aa4.18□□□□□ -1.74
CBWD1-216ENST00000489272 NGDNQ8NEJ9 315 aaKnown RBP4.18□□□□□ -1.74
CBWD1-216ENST00000489272 OR56A3Q8NH54 315 aa4.18□□□□□ -1.74
CBWD1-216ENST00000489272 MAFAQ8NHW3 353 aaPredicted RBP4.18□□□□□ -1.74
CBWD1-216ENST00000489272 NSMCE1Q8WV22 266 aa4.18□□□□□ -1.74
CBWD1-216ENST00000489272 SIGLEC11Q96RL6 698 aa4.18□□□□□ -1.74
CBWD1-216ENST00000489272 TRIM36Q9NQ86 728 aa4.18□□□□□ -1.74
CBWD1-216ENST00000489272 DNMT3BQ9UBC3 853 aaKnown RBP4.18□□□□□ -1.74
CBWD1-216ENST00000489272 hCG_2014768A0A024R1R8 64 aa4.17□□□□□ -1.74
CBWD1-216ENST00000489272 FAM90A10PA6NDY2 464 aa4.17□□□□□ -1.74
CBWD1-216ENST00000489272 CAPN8A6NHC0 703 aa4.17□□□□□ -1.74
CBWD1-216ENST00000489272 FAM227AF5H4B4 570 aa4.17□□□□□ -1.74
CBWD1-216ENST00000489272 TBX3O15119 743 aa4.17□□□□□ -1.74
CBWD1-216ENST00000489272 CD3EAPO15446 510 aaKnown RBP4.17□□□□□ -1.74
CBWD1-216ENST00000489272 SPRY2O43597 315 aa4.17□□□□□ -1.74
CBWD1-216ENST00000489272 KLRC1P26715 233 aa4.17□□□□□ -1.74
CBWD1-216ENST00000489272 HOXD9P28356 352 aaPredicted RBP4.17□□□□□ -1.74
CBWD1-216ENST00000489272 CCKARP32238 428 aa4.17□□□□□ -1.74
CBWD1-216ENST00000489272 RAB27AP51159 221 aa4.17□□□□□ -1.74
CBWD1-216ENST00000489272 TIRAPP58753 221 aa4.17□□□□□ -1.74
CBWD1-216ENST00000489272 TIAL1Q01085 375 aaKnown RBP eCLIP4.17□□□□□ -1.74
CBWD1-216ENST00000489272 ID2Q02363 134 aa4.17□□□□□ -1.74
CBWD1-216ENST00000489272 KCNB1Q14721 858 aa4.17□□□□□ -1.74
CBWD1-216ENST00000489272 TMTC4Q5T4D3 741 aa4.17□□□□□ -1.74
CBWD1-216ENST00000489272 ZDHHC24Q6UX98 284 aa4.17□□□□□ -1.74
CBWD1-216ENST00000489272 RANBP10Q6VN20 620 aa4.17□□□□□ -1.74
CBWD1-216ENST00000489272 EPM2AIP1Q7L775 607 aaPredicted RBP4.17□□□□□ -1.74
CBWD1-216ENST00000489272 ZDHHC17Q8IUH5 632 aa4.17□□□□□ -1.74
CBWD1-216ENST00000489272 LIX1LQ8IVB5 337 aa4.17□□□□□ -1.74
CBWD1-216ENST00000489272 C16orf71Q8IYS4 520 aaPredicted RBP4.17□□□□□ -1.74
CBWD1-216ENST00000489272 MAML1Q92585 1016 aa4.17□□□□□ -1.74
CBWD1-216ENST00000489272 CTHRC1Q96CG8 243 aa4.17□□□□□ -1.74
CBWD1-216ENST00000489272 VCPIP1Q96JH7 1222 aa4.17□□□□□ -1.74
CBWD1-216ENST00000489272 RTFDC1Q9BY42 306 aaPredicted RBP4.17□□□□□ -1.74
CBWD1-216ENST00000489272 FOXP1Q9H334 677 aaPredicted RBP4.17□□□□□ -1.74
CBWD1-216ENST00000489272 ATP6V0A4Q9HBG4 840 aa4.17□□□□□ -1.74
CBWD1-216ENST00000489272 MGAT4CQ9UBM8 478 aa4.17□□□□□ -1.74
CBWD1-216ENST00000489272 TTC3P53804 2025 aa4.17□□□□□ -1.74
CBWD1-216ENST00000489272 ZMYM2Q9UBW7 1377 aa4.16□□□□□ -1.74
CBWD1-216ENST00000489272 H7C4K7 107 aa4.16□□□□□ -1.74
CBWD1-216ENST00000489272 PYCARD-AS1I3L0S3 204 aa4.16□□□□□ -1.74
CBWD1-216ENST00000489272 KRT86O43790 486 aa4.16□□□□□ -1.74
CBWD1-216ENST00000489272 RRP9O43818 475 aaKnown RBP4.16□□□□□ -1.74
CBWD1-216ENST00000489272 RFPL1O75677 317 aa4.16□□□□□ -1.74
CBWD1-216ENST00000489272 TUSC2O75896 110 aa4.16□□□□□ -1.74
CBWD1-216ENST00000489272 RASSF9O75901 435 aa4.16□□□□□ -1.74
CBWD1-216ENST00000489272 OAZ2O95190 189 aa4.16□□□□□ -1.74
CBWD1-216ENST00000489272 PDGFRBP09619 1106 aa4.16□□□□□ -1.74
CBWD1-216ENST00000489272 MYBP10242 640 aa4.16□□□□□ -1.74
CBWD1-216ENST00000489272 PTDSS1P48651 473 aaKnown RBP4.16□□□□□ -1.74
CBWD1-216ENST00000489272 LINC00205P59089 165 aa4.16□□□□□ -1.74
CBWD1-216ENST00000489272 KRTAP10-12P60413 245 aa4.16□□□□□ -1.74
CBWD1-216ENST00000489272 KRT81Q14533 505 aa4.16□□□□□ -1.74
CBWD1-216ENST00000489272 TRIM71Q2Q1W2 868 aaKnown RBP4.16□□□□□ -1.74
CBWD1-216ENST00000489272 CC2D1BQ5T0F9 858 aaKnown RBP4.16□□□□□ -1.74
CBWD1-216ENST00000489272 OVCH2Q7RTZ1 564 aa4.16□□□□□ -1.74
CBWD1-216ENST00000489272 KCTD20Q7Z5Y7 419 aa4.16□□□□□ -1.74
CBWD1-216ENST00000489272 MICU3Q86XE3 530 aa4.16□□□□□ -1.74
CBWD1-216ENST00000489272 COL23A1Q86Y22 540 aaPredicted RBP4.16□□□□□ -1.74
CBWD1-216ENST00000489272 ANKRD13BQ86YJ7 626 aa4.16□□□□□ -1.74
CBWD1-216ENST00000489272 WDYHV1Q96HA8 205 aa4.16□□□□□ -1.74
CBWD1-216ENST00000489272 CDH19Q9H159 772 aa4.16□□□□□ -1.74
CBWD1-216ENST00000489272 GAR1Q9NY12 217 aaKnown RBP4.16□□□□□ -1.74
CBWD1-216ENST00000489272 HDAC9Q9UKV0 1011 aa4.16□□□□□ -1.74
CBWD1-216ENST00000489272 CFAP69A5D8W1 941 aa4.15□□□□□ -1.75
CBWD1-216ENST00000489272 ANKRD62A6NC57 917 aa4.15□□□□□ -1.75
CBWD1-216ENST00000489272 TRIM43BA6NCK2 446 aa4.15□□□□□ -1.75
CBWD1-216ENST00000489272 EXOC5O00471 708 aa4.15□□□□□ -1.75
CBWD1-216ENST00000489272 CTNND1O60716 968 aaKnown RBP4.15□□□□□ -1.75
CBWD1-216ENST00000489272 PIAS2O75928 621 aa4.15□□□□□ -1.75
CBWD1-216ENST00000489272 CYP19A1P11511 503 aaPredicted RBP4.15□□□□□ -1.75
CBWD1-216ENST00000489272 BRAFP15056 766 aa4.15□□□□□ -1.75
CBWD1-216ENST00000489272 CD19P15391 556 aa4.15□□□□□ -1.75
CBWD1-216ENST00000489272 PGDP52209 483 aa4.15□□□□□ -1.75
CBWD1-216ENST00000489272 ITGA8P53708 1063 aa4.15□□□□□ -1.75
CBWD1-216ENST00000489272 EPHB1P54762 984 aa4.15□□□□□ -1.75
CBWD1-216ENST00000489272 RPS13P62277 151 aaKnown RBP4.15□□□□□ -1.75
CBWD1-216ENST00000489272 SRSF1Q07955 248 aaKnown RBP eCLIP4.15□□□□□ -1.75
CBWD1-216ENST00000489272 SEC23BQ15437 767 aa4.15□□□□□ -1.75
CBWD1-216ENST00000489272 DEF8Q6ZN54 512 aa4.15□□□□□ -1.75
CBWD1-216ENST00000489272 SMCR8Q8TEV9 937 aaPredicted RBP4.15□□□□□ -1.75
CBWD1-216ENST00000489272 TRIM43Q96BQ3 446 aaPredicted RBP4.15□□□□□ -1.75
CBWD1-216ENST00000489272 WBP1Q96G27 269 aa4.15□□□□□ -1.75
CBWD1-216ENST00000489272 ZBTB45Q96K62 511 aaPredicted RBP4.15□□□□□ -1.75
CBWD1-216ENST00000489272 C22orf23Q9BZE7 217 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms