RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 PDE4CQ08493 712 aa15.04■□□□□ -0
BRCA1-218ENST00000489037 KCNJ12Q14500 433 aa15.04■□□□□ -0
BRCA1-218ENST00000489037 CNGA2Q16280 664 aa15.04■□□□□ -0
BRCA1-218ENST00000489037 STX1AQ16623 288 aa15.04■□□□□ -0
BRCA1-218ENST00000489037 VWA3BQ502W6 1294 aa15.04■□□□□ -0
BRCA1-218ENST00000489037 DGKKQ5KSL6 1271 aa15.04■□□□□ -0
BRCA1-218ENST00000489037 LCLAT1Q6UWP7 414 aa15.04■□□□□ -0
BRCA1-218ENST00000489037 CCDC186Q7Z3E2 898 aa15.04■□□□□ -0
BRCA1-218ENST00000489037 C1orf210Q8IVY1 113 aa15.04■□□□□ -0
BRCA1-218ENST00000489037 ENOX1Q8TC92 643 aaKnown RBP15.04■□□□□ -0
BRCA1-218ENST00000489037 KAT5Q92993 513 aa15.04■□□□□ -0
BRCA1-218ENST00000489037 NDST4Q9H3R1 872 aa15.04■□□□□ -0
BRCA1-218ENST00000489037 ECT2Q9H8V3 914 aa15.04■□□□□ -0
BRCA1-218ENST00000489037 HPS4Q9NQG7 708 aa15.04■□□□□ -0
BRCA1-218ENST00000489037 DLGAP2Q9P1A6 1054 aa15.04■□□□□ -0
BRCA1-218ENST00000489037 TBC1D14Q9P2M4 693 aa15.04■□□□□ -0
BRCA1-218ENST00000489037 NAGPAQ9UK23 515 aa15.04■□□□□ -0
BRCA1-218ENST00000489037 NFE2L3Q9Y4A8 694 aa15.04■□□□□ -0
BRCA1-218ENST00000489037 A0A1W2PQH9 124 aa15.03■□□□□ -0
BRCA1-218ENST00000489037 E2F8A0AVK6 867 aa15.03■□□□□ -0
BRCA1-218ENST00000489037 O00370 1275 aa15.03■□□□□ -0
BRCA1-218ENST00000489037 CYP26A1O43174 497 aa15.03■□□□□ -0
BRCA1-218ENST00000489037 MED7O43513 233 aa15.03■□□□□ -0
BRCA1-218ENST00000489037 RARGP13631 454 aa15.03■□□□□ -0
BRCA1-218ENST00000489037 SLC9A1P19634 815 aa15.03■□□□□ -0
BRCA1-218ENST00000489037 EEF1GP26641 437 aaKnown RBP15.03■□□□□ -0
BRCA1-218ENST00000489037 GRSF1Q12849 480 aaKnown RBP eCLIP15.03■□□□□ -0
BRCA1-218ENST00000489037 PPP2R5DQ14738 602 aa15.03■□□□□ -0
BRCA1-218ENST00000489037 PON2Q15165 354 aa15.03■□□□□ -0
BRCA1-218ENST00000489037 EML3Q32P44 896 aa15.03■□□□□ -0
BRCA1-218ENST00000489037 HSP90AA4PQ58FG1 418 aa15.03■□□□□ -0
BRCA1-218ENST00000489037 TRIM65Q6PJ69 517 aa15.03■□□□□ -0
BRCA1-218ENST00000489037 TTC30AQ86WT1 665 aa15.03■□□□□ -0
BRCA1-218ENST00000489037 SIX6OS1Q8N1H7 587 aa15.03■□□□□ -0
BRCA1-218ENST00000489037 ANKRD20A12PQ8NF67 263 aa15.03■□□□□ -0
BRCA1-218ENST00000489037 RIN3Q8TB24 985 aa15.03■□□□□ -0
BRCA1-218ENST00000489037 UBA3Q8TBC4 463 aa15.03■□□□□ -0
BRCA1-218ENST00000489037 APEX2Q9UBZ4 518 aa15.03■□□□□ -0
BRCA1-218ENST00000489037 LSM7Q9UK45 103 aaKnown RBP15.03■□□□□ -0
BRCA1-218ENST00000489037 USP3Q9Y6I4 520 aa15.03■□□□□ -0
BRCA1-218ENST00000489037 M0QYV0 167 aa15.02■□□□□ -0
BRCA1-218ENST00000489037 RNF225M0QZC1 329 aaPredicted RBP15.02■□□□□ -0
BRCA1-218ENST00000489037 BRD2P25440 801 aaKnown RBP15.02■□□□□ -0
BRCA1-218ENST00000489037 USP8P40818 1118 aa15.02■□□□□ -0
BRCA1-218ENST00000489037 TKTL1P51854 596 aa15.02■□□□□ -0
BRCA1-218ENST00000489037 ARHGAP44Q17R89 818 aa15.02■□□□□ -0
BRCA1-218ENST00000489037 RAB41Q5JT25 222 aa15.02■□□□□ -0
BRCA1-218ENST00000489037 C10orf120Q5SQS8 335 aa15.02■□□□□ -0
BRCA1-218ENST00000489037 KLHDC10Q6PID8 442 aa15.02■□□□□ -0
BRCA1-218ENST00000489037 RSRC2Q7L4I2 434 aaKnown RBP15.02■□□□□ -0
BRCA1-218ENST00000489037 OTUB2Q96DC9 234 aa15.02■□□□□ -0
BRCA1-218ENST00000489037 KREMEN1Q96MU8 473 aa15.02■□□□□ -0
BRCA1-218ENST00000489037 LINC00597Q9H2U6 94 aa15.02■□□□□ -0
BRCA1-218ENST00000489037 CYLDQ9NQC7 956 aa15.02■□□□□ -0
BRCA1-218ENST00000489037 SAMSN1Q9NSI8 373 aaKnown RBP15.02■□□□□ -0
BRCA1-218ENST00000489037 CLIC5Q9NZA1 410 aa15.02■□□□□ -0
BRCA1-218ENST00000489037 DNMT3LQ9UJW3 386 aa15.02■□□□□ -0
BRCA1-218ENST00000489037 SHISA7A6NL88 538 aa15.01□□□□□ -0.01
BRCA1-218ENST00000489037 ZBED1O96006 694 aa15.01□□□□□ -0.01
BRCA1-218ENST00000489037 IRF1P10914 325 aa15.01□□□□□ -0.01
BRCA1-218ENST00000489037 CHRNB1P11230 501 aa15.01□□□□□ -0.01
BRCA1-218ENST00000489037 PON1P27169 355 aa15.01□□□□□ -0.01
BRCA1-218ENST00000489037 GJA4P35212 333 aa15.01□□□□□ -0.01
BRCA1-218ENST00000489037 PLA2G4AP47712 749 aa15.01□□□□□ -0.01
BRCA1-218ENST00000489037 ZXDBP98169 803 aa15.01□□□□□ -0.01
BRCA1-218ENST00000489037 TCP11X2Q5H9J9 407 aa15.01□□□□□ -0.01
BRCA1-218ENST00000489037 BTBD8Q5XKL5 378 aa15.01□□□□□ -0.01
BRCA1-218ENST00000489037 SMYD5Q6GMV2 418 aa15.01□□□□□ -0.01
BRCA1-218ENST00000489037 TXNDC11Q6PKC3 985 aa15.01□□□□□ -0.01
BRCA1-218ENST00000489037 SYNPOQ8N3V7 929 aa15.01□□□□□ -0.01
BRCA1-218ENST00000489037 ZNF276Q8N554 614 aa15.01□□□□□ -0.01
BRCA1-218ENST00000489037 KCTD13Q8WZ19 329 aa15.01□□□□□ -0.01
BRCA1-218ENST00000489037 TFAP2BQ92481 460 aa15.01□□□□□ -0.01
BRCA1-218ENST00000489037 P2RY13Q9BPV8 354 aa15.01□□□□□ -0.01
BRCA1-218ENST00000489037 ULBP1Q9BZM6 244 aa15.01□□□□□ -0.01
BRCA1-218ENST00000489037 NAT10Q9H0A0 1025 aaKnown RBP15.01□□□□□ -0.01
BRCA1-218ENST00000489037 CHRDQ9H2X0 955 aa15.01□□□□□ -0.01
BRCA1-218ENST00000489037 NMUR1Q9HB89 426 aa15.01□□□□□ -0.01
BRCA1-218ENST00000489037 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.01□□□□□ -0.01
BRCA1-218ENST00000489037 FBXO4Q9UKT5 387 aa15.01□□□□□ -0.01
BRCA1-218ENST00000489037 STRIP2Q9ULQ0 834 aa15.01□□□□□ -0.01
BRCA1-218ENST00000489037 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.01□□□□□ -0.01
BRCA1-218ENST00000489037 CNTN6Q9UQ52 1028 aa15.01□□□□□ -0.01
BRCA1-218ENST00000489037 TRDMT1O14717 391 aaKnown RBP15□□□□□ -0.01
BRCA1-218ENST00000489037 THAP12O43422 761 aa15□□□□□ -0.01
BRCA1-218ENST00000489037 LETM1O95202 739 aaPredicted RBP15□□□□□ -0.01
BRCA1-218ENST00000489037 TBX18O95935 607 aa15□□□□□ -0.01
BRCA1-218ENST00000489037 ADH1CP00326 375 aa15□□□□□ -0.01
BRCA1-218ENST00000489037 LCP1P13796 627 aa15□□□□□ -0.01
BRCA1-218ENST00000489037 PTMSP20962 102 aa15□□□□□ -0.01
BRCA1-218ENST00000489037 DRD1P21728 446 aa15□□□□□ -0.01
BRCA1-218ENST00000489037 GNA15P30679 374 aa15□□□□□ -0.01
BRCA1-218ENST00000489037 CCR3P51677 355 aa15□□□□□ -0.01
BRCA1-218ENST00000489037 ZNF132P52740 706 aa15□□□□□ -0.01
BRCA1-218ENST00000489037 YWHAGP61981 247 aaKnown RBP eCLIP15□□□□□ -0.01
BRCA1-218ENST00000489037 COG7P83436 770 aa15□□□□□ -0.01
BRCA1-218ENST00000489037 ADIGQ0VDE8 80 aa15□□□□□ -0.01
BRCA1-218ENST00000489037 FZD5Q13467 585 aa15□□□□□ -0.01
BRCA1-218ENST00000489037 ZC3H14Q6PJT7 736 aaKnown RBP15□□□□□ -0.01
BRCA1-218ENST00000489037 SCD5Q86SK9 330 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms