RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 NTN5Q8WTR8 489 aaPredicted RBP3.28□□□□□ -1.88
CALD1-221ENST00000489019 MAP4K1Q92918 833 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 RGMAQ96B86 450 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 HOOK2Q96ED9 719 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 EDC3Q96F86 508 aaKnown RBP3.28□□□□□ -1.88
CALD1-221ENST00000489019 TTC14Q96N46 770 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 NEK1Q96PY6 1258 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 CRAMP1Q96RY5 1269 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 MPHOSPH6Q99547 160 aaKnown RBP3.28□□□□□ -1.88
CALD1-221ENST00000489019 AIFM2Q9BRQ8 373 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 ISCA1Q9BUE6 129 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 PUS3Q9BZE2 481 aaKnown RBP3.28□□□□□ -1.88
CALD1-221ENST00000489019 TM6SF1Q9BZW5 370 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 R3HDMLQ9H3Y0 253 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 PRDM16Q9HAZ2 1276 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 TCF7L1Q9HCS4 588 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 GPR108Q9NPR9 543 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 HELLSQ9NRZ9 838 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 LMBRD1Q9NUN5 540 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 PAG1Q9NWQ8 432 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 SIDT1Q9NXL6 827 aaKnown RBP3.28□□□□□ -1.88
CALD1-221ENST00000489019 KCTD5Q9NXV2 234 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 ZIM2Q9NZV7 527 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 FOXJ2Q9P0K8 574 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 IP6K2Q9UHH9 426 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 TRMT112Q9UI30 125 aaKnown RBP3.28□□□□□ -1.88
CALD1-221ENST00000489019 DBNLQ9UJU6 430 aaKnown RBP3.28□□□□□ -1.88
CALD1-221ENST00000489019 NAP1L2Q9ULW6 460 aaPredicted RBP3.28□□□□□ -1.88
CALD1-221ENST00000489019 AGAP1Q9UPQ3 857 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.28□□□□□ -1.88
CALD1-221ENST00000489019 PAPPAQ13219 1627 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 UBR2Q8IWV8 1755 aa3.28□□□□□ -1.89
CALD1-221ENST00000489019 TNS2Q63HR2 1409 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 COL11A2P13942 1736 aaPredicted RBP3.27□□□□□ -1.89
CALD1-221ENST00000489019 NUP188Q5SRE5 1749 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 RFX7Q2KHR2 1363 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 ROBO1Q9Y6N7 1651 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 CCDC195A0A1B0GUA6 201 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 FSD2A1L4K1 749 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 GOLGA6L4A6NEF3 574 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 ZNF785A8K8V0 405 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 H3BQV1 296 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 RNF113AO15541 343 aaKnown RBP3.27□□□□□ -1.89
CALD1-221ENST00000489019 CREB3O43889 395 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 TOM1O60784 492 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 ABLIM3O94929 683 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 MATN4O95460 622 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 LARGE1O95461 756 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 FTLP02792 175 aaPredicted RBP3.27□□□□□ -1.89
CALD1-221ENST00000489019 GJB1P08034 283 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 CYP19A1P11511 503 aaPredicted RBP3.27□□□□□ -1.89
CALD1-221ENST00000489019 XRCC6P12956 609 aaKnown RBP eCLIP3.27□□□□□ -1.89
CALD1-221ENST00000489019 RPS6KB1P23443 525 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 CXCR5P32302 372 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 CYP2C19P33261 490 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 IGHMBP2P38935 993 aaKnown RBP3.27□□□□□ -1.89
CALD1-221ENST00000489019 IL6STP40189 918 aaPredicted RBP3.27□□□□□ -1.89
CALD1-221ENST00000489019 RPS7P62081 194 aaKnown RBP3.27□□□□□ -1.89
CALD1-221ENST00000489019 PSMC1P62191 440 aaKnown RBP3.27□□□□□ -1.89
CALD1-221ENST00000489019 POU6F2P78424 691 aaPredicted RBP3.27□□□□□ -1.89
CALD1-221ENST00000489019 UBE4AQ14139 1066 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 HLFQ16534 295 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 PGS1Q32NB8 556 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 ZSCAN23Q3MJ62 389 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 SYCP2LQ5T4T6 812 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 KIAA0895LQ68EN5 471 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 ZSCAN25Q6NSZ9 544 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 TAPT1Q6NXT6 567 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 TSHZ1Q6ZSZ6 1077 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 ATG9AQ7Z3C6 839 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 HEATR3Q7Z4Q2 680 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 CLNKQ7Z7G1 428 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 ZNF589Q86UQ0 364 aaPredicted RBP3.27□□□□□ -1.89
CALD1-221ENST00000489019 ZNF575Q86XF7 245 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 PPP1R3BQ86XI6 285 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 PDSS2Q86YH6 399 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 CHPFQ8IZ52 775 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 ADGRG5Q8IZF4 528 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 MYO1HQ8N1T3 1032 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 NECAB1Q8N987 351 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 KBTBD3Q8NAB2 608 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 FAM184AQ8NB25 1140 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 FAM98AQ8NCA5 519 aaKnown RBP3.27□□□□□ -1.89
CALD1-221ENST00000489019 POC1BQ8TC44 478 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 LPIN2Q92539 896 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 SCAMP4Q969E2 229 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 PDLIM2Q96JY6 352 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 TCEANC2Q96MN5 208 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 BBC3Q96PG8 261 aaPredicted RBP3.27□□□□□ -1.89
CALD1-221ENST00000489019 TRIB1Q96RU8 372 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 SEC62Q99442 399 aaKnown RBP3.27□□□□□ -1.89
CALD1-221ENST00000489019 MPHOSPH8Q99549 860 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.27□□□□□ -1.89
CALD1-221ENST00000489019 MRPL46Q9H2W6 279 aaKnown RBP3.27□□□□□ -1.89
CALD1-221ENST00000489019 BRD9Q9H8M2 597 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 SLAMF7Q9NQ25 335 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 MAN1C1Q9NR34 630 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 INTS13Q9NVM9 706 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 ETAA1Q9NY74 926 aa3.27□□□□□ -1.89
CALD1-221ENST00000489019 ABCF2Q9UG63 623 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms