RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 KCTD6Q8NC69 237 aa20.29■□□□□ 0.84
HMG20B-213ENST00000488973 RBM15BQ8NDT2 890 aaKnown RBP20.29■□□□□ 0.84
HMG20B-213ENST00000488973 CMASQ8NFW8 434 aaPredicted RBP20.29■□□□□ 0.84
HMG20B-213ENST00000488973 JOSD2Q8TAC2 188 aa20.29■□□□□ 0.84
HMG20B-213ENST00000488973 APBB2Q92870 758 aa20.29■□□□□ 0.84
HMG20B-213ENST00000488973 FGD4Q96M96 766 aa20.29■□□□□ 0.84
HMG20B-213ENST00000488973 TAGLN3Q9UI15 199 aa20.29■□□□□ 0.84
HMG20B-213ENST00000488973 TRIM49D1C9J1S8 452 aa20.29■□□□□ 0.84
HMG20B-213ENST00000488973 KRT37O76014 449 aa20.29■□□□□ 0.84
HMG20B-213ENST00000488973 ENO1P06733 434 aaKnown RBP20.29■□□□□ 0.84
HMG20B-213ENST00000488973 HSF5Q4G112 596 aaPredicted RBP20.29■□□□□ 0.84
HMG20B-213ENST00000488973 PTPN20Q4JDL3 420 aa20.29■□□□□ 0.84
HMG20B-213ENST00000488973 ANGEL2Q5VTE6 544 aaKnown RBP20.29■□□□□ 0.84
HMG20B-213ENST00000488973 CDHR3Q6ZTQ4 885 aa20.29■□□□□ 0.84
HMG20B-213ENST00000488973 E2F7Q96AV8 911 aa20.29■□□□□ 0.84
HMG20B-213ENST00000488973 PGAP2Q9UHJ9 254 aa20.29■□□□□ 0.84
HMG20B-213ENST00000488973 A0A1B0GVG6 124 aa20.28■□□□□ 0.84
HMG20B-213ENST00000488973 CHADO15335 359 aa20.28■□□□□ 0.84
HMG20B-213ENST00000488973 RGS20O76081 388 aa20.28■□□□□ 0.84
HMG20B-213ENST00000488973 ATG7O95352 703 aa20.28■□□□□ 0.84
HMG20B-213ENST00000488973 C1QAP02745 245 aa20.28■□□□□ 0.84
HMG20B-213ENST00000488973 SNRPAP09012 282 aaKnown RBP20.28■□□□□ 0.84
HMG20B-213ENST00000488973 WEE2P0C1S8 567 aa20.28■□□□□ 0.84
HMG20B-213ENST00000488973 ARL2P36404 184 aa20.28■□□□□ 0.84
HMG20B-213ENST00000488973 MYL6P60660 151 aa20.28■□□□□ 0.84
HMG20B-213ENST00000488973 ACTR3P61158 418 aa20.28■□□□□ 0.84
HMG20B-213ENST00000488973 YWHAEP62258 255 aaKnown RBP20.28■□□□□ 0.84
HMG20B-213ENST00000488973 BST1Q10588 318 aa20.28■□□□□ 0.84
HMG20B-213ENST00000488973 SPATA18Q8TC71 538 aa20.28■□□□□ 0.84
HMG20B-213ENST00000488973 CDHR1Q96JP9 859 aa20.28■□□□□ 0.84
HMG20B-213ENST00000488973 CCDC28BQ9BUN5 200 aa20.28■□□□□ 0.84
HMG20B-213ENST00000488973 YIPF2Q9BWQ6 316 aa20.28■□□□□ 0.84
HMG20B-213ENST00000488973 TMEM134Q9H6X4 195 aa20.28■□□□□ 0.84
HMG20B-213ENST00000488973 ZNF277Q9NRM2 450 aaPredicted RBP20.28■□□□□ 0.84
HMG20B-213ENST00000488973 MKS1Q9NXB0 559 aa20.28■□□□□ 0.84
HMG20B-213ENST00000488973 PPARGC1AQ9UBK2 798 aaKnown RBP20.28■□□□□ 0.84
HMG20B-213ENST00000488973 SPECC1L-ADORA2AF8WAN1 911 aa20.28■□□□□ 0.84
HMG20B-213ENST00000488973 AP2B1P63010 937 aa20.28■□□□□ 0.84
HMG20B-213ENST00000488973 SP4Q02446 784 aa20.28■□□□□ 0.84
HMG20B-213ENST00000488973 LGSNQ5TDP6 509 aa20.28■□□□□ 0.84
HMG20B-213ENST00000488973 SESTD1Q86VW0 696 aa20.28■□□□□ 0.84
HMG20B-213ENST00000488973 RAB3IL1Q8TBN0 382 aa20.28■□□□□ 0.84
HMG20B-213ENST00000488973 FRMD8Q9BZ67 464 aaPredicted RBP20.28■□□□□ 0.84
HMG20B-213ENST00000488973 C1orf21Q9H246 121 aa20.28■□□□□ 0.84
HMG20B-213ENST00000488973 LHX5Q9H2C1 402 aa20.28■□□□□ 0.84
HMG20B-213ENST00000488973 DHX33Q9H6R0 707 aaKnown RBP20.28■□□□□ 0.84
HMG20B-213ENST00000488973 TMEM165Q9HC07 324 aa20.28■□□□□ 0.84
HMG20B-213ENST00000488973 GPAMQ9HCL2 828 aa20.28■□□□□ 0.84
HMG20B-213ENST00000488973 SIRPGQ9P1W8 387 aa20.28■□□□□ 0.84
HMG20B-213ENST00000488973 EDN1P05305 212 aa20.27■□□□□ 0.84
HMG20B-213ENST00000488973 CCNFP41002 786 aa20.27■□□□□ 0.84
HMG20B-213ENST00000488973 SCNN1BP51168 640 aa20.27■□□□□ 0.84
HMG20B-213ENST00000488973 TMPRSS15P98073 1019 aa20.27■□□□□ 0.84
HMG20B-213ENST00000488973 ROR1Q01973 937 aa20.27■□□□□ 0.84
HMG20B-213ENST00000488973 DSG1Q02413 1049 aa20.27■□□□□ 0.84
HMG20B-213ENST00000488973 SEZ6Q53EL9 994 aa20.27■□□□□ 0.84
HMG20B-213ENST00000488973 RIPOR1Q6ZS17 1223 aa20.27■□□□□ 0.84
HMG20B-213ENST00000488973 ULK2Q8IYT8 1036 aa20.27■□□□□ 0.84
HMG20B-213ENST00000488973 FBXO27Q8NI29 283 aa20.27■□□□□ 0.84
HMG20B-213ENST00000488973 PANX3Q96QZ0 392 aa20.27■□□□□ 0.84
HMG20B-213ENST00000488973 ASCC2Q9H1I8 757 aaPredicted RBP20.27■□□□□ 0.84
HMG20B-213ENST00000488973 RSAD1Q9HA92 442 aa20.27■□□□□ 0.84
HMG20B-213ENST00000488973 TTLL3Q9Y4R7 772 aa20.27■□□□□ 0.84
HMG20B-213ENST00000488973 COL11A1P12107 1806 aaPredicted RBP20.27■□□□□ 0.84
HMG20B-213ENST00000488973 ATP6V1G1O75348 118 aa20.27■□□□□ 0.84
HMG20B-213ENST00000488973 SUPT20HL2P0C7V6 817 aa20.27■□□□□ 0.84
HMG20B-213ENST00000488973 CRABP2P29373 138 aa20.27■□□□□ 0.84
HMG20B-213ENST00000488973 PSMC1P62191 440 aaKnown RBP20.27■□□□□ 0.84
HMG20B-213ENST00000488973 SUPT20HL1Q3ZLR7 823 aa20.27■□□□□ 0.84
HMG20B-213ENST00000488973 DENND1BQ6P3S1 775 aa20.27■□□□□ 0.84
HMG20B-213ENST00000488973 PRPF39Q86UA1 669 aaKnown RBP20.27■□□□□ 0.84
HMG20B-213ENST00000488973 ARID3BQ8IVW6 561 aaPredicted RBP20.27■□□□□ 0.84
HMG20B-213ENST00000488973 GBP5Q96PP8 586 aa20.27■□□□□ 0.84
HMG20B-213ENST00000488973 CCDC106Q9BWC9 280 aa20.27■□□□□ 0.84
HMG20B-213ENST00000488973 RNF146Q9NTX7 359 aa20.27■□□□□ 0.84
HMG20B-213ENST00000488973 PIM2Q9P1W9 311 aa20.27■□□□□ 0.84
HMG20B-213ENST00000488973 RAD17O75943 681 aa20.26■□□□□ 0.83
HMG20B-213ENST00000488973 LYNP07948 512 aa20.26■□□□□ 0.83
HMG20B-213ENST00000488973 DARS2Q6PI48 645 aaKnown RBP20.26■□□□□ 0.83
HMG20B-213ENST00000488973 RFX8Q6ZV50 586 aa20.26■□□□□ 0.83
HMG20B-213ENST00000488973 PPM1NQ8N819 430 aa20.26■□□□□ 0.83
HMG20B-213ENST00000488973 MTMR12Q9C0I1 747 aa20.26■□□□□ 0.83
HMG20B-213ENST00000488973 NDE1Q9NXR1 346 aa20.26■□□□□ 0.83
HMG20B-213ENST00000488973 COL4A5P29400 1685 aa20.26■□□□□ 0.83
HMG20B-213ENST00000488973 TRDMT1O14717 391 aaKnown RBP20.26■□□□□ 0.83
HMG20B-213ENST00000488973 PENKP01210 267 aaPredicted RBP20.26■□□□□ 0.83
HMG20B-213ENST00000488973 HARSP12081 509 aaKnown RBP20.26■□□□□ 0.83
HMG20B-213ENST00000488973 MRPS5P82675 430 aaKnown RBP20.26■□□□□ 0.83
HMG20B-213ENST00000488973 DGKZQ13574 1117 aa20.26■□□□□ 0.83
HMG20B-213ENST00000488973 ACAP1Q15027 740 aa20.26■□□□□ 0.83
HMG20B-213ENST00000488973 NOMO1Q15155 1222 aa20.26■□□□□ 0.83
HMG20B-213ENST00000488973 TEX44Q53QW1 395 aa20.26■□□□□ 0.83
HMG20B-213ENST00000488973 KYAT3Q6YP21 454 aaKnown RBP20.26■□□□□ 0.83
HMG20B-213ENST00000488973 NSUN6Q8TEA1 469 aaKnown RBP20.26■□□□□ 0.83
HMG20B-213ENST00000488973 ACAP3Q96P50 834 aa20.26■□□□□ 0.83
HMG20B-213ENST00000488973 ECSITQ9BQ95 431 aa20.26■□□□□ 0.83
HMG20B-213ENST00000488973 MECRQ9BV79 373 aa20.26■□□□□ 0.83
HMG20B-213ENST00000488973 PCMTD2Q9NV79 361 aa20.26■□□□□ 0.83
HMG20B-213ENST00000488973 SUN2Q9UH99 717 aa20.26■□□□□ 0.83
HMG20B-213ENST00000488973 SLC7A8Q9UHI5 535 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms