RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 ADAT2Q7Z6V5 191 aaKnown RBP11.43□□□□□ -0.58
COL21A1-211ENST00000488912 DEFB106AQ8N104 65 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 FIBCD1Q8N539 461 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 FAM172AQ8WUF8 416 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 DPF3Q92784 378 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 PEBP4Q96S96 227 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 SLC9A7Q96T83 725 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 C11orf84Q9BUA3 381 aaPredicted RBP11.43□□□□□ -0.58
COL21A1-211ENST00000488912 AP1M1Q9BXS5 423 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 OXCT2Q9BYC2 517 aaPredicted RBP11.43□□□□□ -0.58
COL21A1-211ENST00000488912 CRISPLD1Q9H336 500 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 ZWILCHQ9H900 591 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 NGRNQ9NPE2 291 aaKnown RBP11.43□□□□□ -0.58
COL21A1-211ENST00000488912 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.43□□□□□ -0.58
COL21A1-211ENST00000488912 PCSK1NQ9UHG2 260 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 USP18Q9UMW8 372 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 GBF1Q92538 1859 aa11.43□□□□□ -0.58
COL21A1-211ENST00000488912 RANBP2P49792 3224 aaKnown RBP11.43□□□□□ -0.58
COL21A1-211ENST00000488912 COL4A4P53420 1690 aaPredicted RBP11.43□□□□□ -0.58
COL21A1-211ENST00000488912 WDR27A2RRH5 827 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 SOAT2O75908 522 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 ATP2A2P16615 1042 aaKnown RBP11.42□□□□□ -0.58
COL21A1-211ENST00000488912 PCK1P35558 622 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 PPM1AP35813 382 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 MATKP42679 507 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 PTPN9P43378 593 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 GLUD2P49448 558 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 ROR1Q01973 937 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 DSG1Q02413 1049 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 IFRD2Q12894 506 aaPredicted RBP11.42□□□□□ -0.58
COL21A1-211ENST00000488912 LONRF2Q1L5Z9 754 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 DCAF6Q58WW2 860 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 KCNT1Q5JUK3 1230 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 POLNQ7Z5Q5 900 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 DDX53Q86TM3 631 aaKnown RBP11.42□□□□□ -0.58
COL21A1-211ENST00000488912 LBHD1Q9BQE6 289 aaPredicted RBP11.42□□□□□ -0.58
COL21A1-211ENST00000488912 DDX23Q9BUQ8 820 aaKnown RBP11.42□□□□□ -0.58
COL21A1-211ENST00000488912 HERC2P3Q9BVR0 1158 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 EPC1Q9H2F5 836 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 POPDC2Q9HBU9 364 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 SLC27A5Q9Y2P5 690 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 NR2E1Q9Y466 385 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 BACE2Q9Y5Z0 518 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 USP3Q9Y6I4 520 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 TCRBV7S2A1N4TA0A589 114 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 LCHNA4D1U4 455 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 PI4K2BG5E9Z4 385 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 TRIM66O15016 1216 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 SART1O43290 800 aaKnown RBP11.42□□□□□ -0.58
COL21A1-211ENST00000488912 KRT1P04264 644 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 FYNP06241 537 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 GLI1P08151 1106 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 H2AFXP16104 143 aaPredicted RBP11.42□□□□□ -0.58
COL21A1-211ENST00000488912 OR1D2P34982 312 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 MAGEA11P43364 429 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 HDAC4P56524 1084 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 PITX1P78337 314 aaPredicted RBP11.42□□□□□ -0.58
COL21A1-211ENST00000488912 HADHQ16836 314 aaKnown RBP11.42□□□□□ -0.58
COL21A1-211ENST00000488912 ZFYVE27Q5T4F4 411 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 SYPL2Q5VXT5 272 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 PM20D1Q6GTS8 502 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 CYP4V2Q6ZWL3 525 aaPredicted RBP11.42□□□□□ -0.58
COL21A1-211ENST00000488912 ANKS1BQ7Z6G8 1248 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 CCDC50Q8IVM0 306 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 EXD1Q8NHP7 514 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 SPPL2BQ8TCT7 592 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 CLP1Q92989 425 aaKnown RBP11.42□□□□□ -0.58
COL21A1-211ENST00000488912 RNF25Q96BH1 459 aaPredicted RBP11.42□□□□□ -0.58
COL21A1-211ENST00000488912 SLC2A13Q96QE2 648 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 TBCBQ99426 244 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 SEPT5Q99719 369 aaPredicted RBP11.42□□□□□ -0.58
COL21A1-211ENST00000488912 CLSTN3Q9BQT9 956 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 HERPUD2Q9BSE4 406 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 PLVAPQ9BX97 442 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 AAASQ9NRG9 546 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 PCDHB12Q9Y5F1 795 aa11.42□□□□□ -0.58
COL21A1-211ENST00000488912 CARNS1A5YM72 827 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 KRIT1O00522 736 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 TLL1O43897 1013 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 FGF18O76093 207 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 ZRANB2O95218 330 aaKnown RBP eCLIP11.41□□□□□ -0.58
COL21A1-211ENST00000488912 TRUB2O95900 331 aaKnown RBP11.41□□□□□ -0.58
COL21A1-211ENST00000488912 LTFP02788 710 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 KRT7P08729 469 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 DNAJB2P25686 324 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 ATXN1P54253 815 aaKnown RBP11.41□□□□□ -0.58
COL21A1-211ENST00000488912 SMARCB1Q12824 385 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 SMC1AQ14683 1233 aaKnown RBP11.41□□□□□ -0.58
COL21A1-211ENST00000488912 OTUD1Q5VV17 481 aaPredicted RBP11.41□□□□□ -0.58
COL21A1-211ENST00000488912 SLC13A5Q86YT5 568 aaPredicted RBP11.41□□□□□ -0.58
COL21A1-211ENST00000488912 VPS52Q8N1B4 723 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 SP7Q8TDD2 431 aaPredicted RBP11.41□□□□□ -0.58
COL21A1-211ENST00000488912 GPR152Q8TDT2 470 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 AUTS2Q8WXX7 1259 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 RAPGEF5Q92565 580 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 CENPIQ92674 756 aaPredicted RBP11.41□□□□□ -0.58
COL21A1-211ENST00000488912 ABHD8Q96I13 439 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 C8orf48Q96LL4 319 aa11.41□□□□□ -0.58
COL21A1-211ENST00000488912 NAP1L3Q99457 506 aaPredicted RBP11.41□□□□□ -0.58
COL21A1-211ENST00000488912 RAD9AQ99638 391 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms