RNA–Protein interactions for RNA: ENST00000488628.1

SUN1-233, Transcript of Sad1 and UNC84 domain containing 1, human

TSL 4

Gene SUN1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUN1-233	ENST00000488628	FBXO43	Q4G163	708 aa		18.05	■□□□□ 0.48
SUN1-233	ENST00000488628	DCAF17	Q5H9S7	520 aa	Predicted RBP	18.05	■□□□□ 0.48
SUN1-233	ENST00000488628	LAIR1	Q6GTX8	287 aa		18.05	■□□□□ 0.48
SUN1-233	ENST00000488628	KIAA1958	Q8N8K9	716 aa		18.05	■□□□□ 0.48
SUN1-233	ENST00000488628	SLC4A11	Q8NBS3	891 aa		18.05	■□□□□ 0.48
SUN1-233	ENST00000488628	CCDC150	Q8NCX0	1101 aa		18.05	■□□□□ 0.48
SUN1-233	ENST00000488628	TSG101	Q99816	390 aa		18.05	■□□□□ 0.48
SUN1-233	ENST00000488628	FBXO44	Q9H4M3	255 aa		18.05	■□□□□ 0.48
SUN1-233	ENST00000488628	CISH	Q9NSE2	258 aa		18.05	■□□□□ 0.48
SUN1-233	ENST00000488628	GMEB2	Q9UKD1	530 aa		18.05	■□□□□ 0.48
SUN1-233	ENST00000488628	MAN1B1	Q9UKM7	699 aa		18.05	■□□□□ 0.48
SUN1-233	ENST00000488628	RAB23	Q9ULC3	237 aa		18.05	■□□□□ 0.48
SUN1-233	ENST00000488628	LAMA1	P25391	3075 aa		18.05	■□□□□ 0.48
SUN1-233	ENST00000488628	E2F8	A0AVK6	867 aa		18.04	■□□□□ 0.48
SUN1-233	ENST00000488628	SLC9A3R1	O14745	358 aa	Predicted RBP	18.04	■□□□□ 0.48
SUN1-233	ENST00000488628	TLR5	O60602	858 aa		18.04	■□□□□ 0.48
SUN1-233	ENST00000488628	ACO1	P21399	889 aa	Known RBP	18.04	■□□□□ 0.48
SUN1-233	ENST00000488628	BMP6	P22004	513 aa		18.04	■□□□□ 0.48
SUN1-233	ENST00000488628	CNR2	P34972	360 aa		18.04	■□□□□ 0.48
SUN1-233	ENST00000488628	TUB	P50607	506 aa		18.04	■□□□□ 0.48
SUN1-233	ENST00000488628	RAD23B	P54727	409 aa		18.04	■□□□□ 0.48
SUN1-233	ENST00000488628	FKBP3	Q00688	224 aa	Known RBP	18.04	■□□□□ 0.48
SUN1-233	ENST00000488628	SPEM2	Q0P670	501 aa		18.04	■□□□□ 0.48
SUN1-233	ENST00000488628	C2orf27A	Q580R0	203 aa		18.04	■□□□□ 0.48
SUN1-233	ENST00000488628	LY6G5C	Q5SRR4	150 aa		18.04	■□□□□ 0.48
SUN1-233	ENST00000488628	TCERG1L	Q5VWI1	586 aa		18.04	■□□□□ 0.48
SUN1-233	ENST00000488628	DDX42	Q86XP3	938 aa	Known RBP eCLIP	18.04	■□□□□ 0.48
SUN1-233	ENST00000488628	BBS7	Q8IWZ6	715 aa		18.04	■□□□□ 0.48
SUN1-233	ENST00000488628	USP33	Q8TEY7	942 aa		18.04	■□□□□ 0.48
SUN1-233	ENST00000488628	HEXIM2	Q96MH2	286 aa	Known RBP	18.04	■□□□□ 0.48
SUN1-233	ENST00000488628	NUDT5	Q9UKK9	219 aa		18.04	■□□□□ 0.48
SUN1-233	ENST00000488628	SCML2	Q9UQR0	700 aa		18.04	■□□□□ 0.48
SUN1-233	ENST00000488628		A0A1W2PQH9	124 aa		18.03	■□□□□ 0.48
SUN1-233	ENST00000488628	MDM4	O15151	490 aa		18.03	■□□□□ 0.48
SUN1-233	ENST00000488628	SLC16A3	O15427	465 aa	Known RBP	18.03	■□□□□ 0.48
SUN1-233	ENST00000488628	GREM1	O60565	184 aa		18.03	■□□□□ 0.48
SUN1-233	ENST00000488628	CHRM1	P11229	460 aa	Predicted RBP	18.03	■□□□□ 0.48
SUN1-233	ENST00000488628	DMC1	Q14565	340 aa		18.03	■□□□□ 0.48
SUN1-233	ENST00000488628	RSPO4	Q2I0M5	234 aa	Predicted RBP	18.03	■□□□□ 0.48
SUN1-233	ENST00000488628	CEP68	Q76N32	757 aa		18.03	■□□□□ 0.48
SUN1-233	ENST00000488628	SYT13	Q7L8C5	426 aa		18.03	■□□□□ 0.48
SUN1-233	ENST00000488628	SCD5	Q86SK9	330 aa		18.03	■□□□□ 0.48
SUN1-233	ENST00000488628	FAM160A2	Q8N612	972 aa	Predicted RBP	18.03	■□□□□ 0.48
SUN1-233	ENST00000488628	SECISBP2L	Q93073	1101 aa	Known RBP	18.03	■□□□□ 0.48
SUN1-233	ENST00000488628	SLC35C1	Q96A29	364 aa		18.03	■□□□□ 0.48
SUN1-233	ENST00000488628	EXOC4	Q96A65	974 aa		18.03	■□□□□ 0.48
SUN1-233	ENST00000488628	DUSP9	Q99956	384 aa	Known RBP	18.03	■□□□□ 0.48
SUN1-233	ENST00000488628	KLF16	Q9BXK1	252 aa	Predicted RBP	18.03	■□□□□ 0.48
SUN1-233	ENST00000488628	DUSP16	Q9BY84	665 aa		18.03	■□□□□ 0.48
SUN1-233	ENST00000488628	TLR8	Q9NR97	1041 aa	Known RBP	18.03	■□□□□ 0.48
SUN1-233	ENST00000488628	USP18	Q9UMW8	372 aa		18.03	■□□□□ 0.48
SUN1-233	ENST00000488628	COQ4	Q9Y3A0	265 aa		18.03	■□□□□ 0.48
SUN1-233	ENST00000488628	SH3BP1	Q9Y3L3	701 aa		18.03	■□□□□ 0.48
SUN1-233	ENST00000488628	STX10	O60499	249 aa		18.02	■□□□□ 0.48
SUN1-233	ENST00000488628	RET	P07949	1114 aa		18.02	■□□□□ 0.48
SUN1-233	ENST00000488628	ADH5	P11766	374 aa		18.02	■□□□□ 0.48
SUN1-233	ENST00000488628	KIF11	P52732	1056 aa		18.02	■□□□□ 0.48
SUN1-233	ENST00000488628	LRRC63	Q05C16	580 aa		18.02	■□□□□ 0.48
SUN1-233	ENST00000488628	EMC10	Q5UCC4	262 aa		18.02	■□□□□ 0.48
SUN1-233	ENST00000488628	KBTBD6	Q86V97	674 aa		18.02	■□□□□ 0.48
SUN1-233	ENST00000488628	TMEM25	Q86YD3	366 aa		18.02	■□□□□ 0.48
SUN1-233	ENST00000488628	CCDC33	Q8N5R6	958 aa		18.02	■□□□□ 0.48
SUN1-233	ENST00000488628	NAT16	Q8N8M0	369 aa		18.02	■□□□□ 0.48
SUN1-233	ENST00000488628	GAB3	Q8WWW8	586 aa		18.02	■□□□□ 0.48
SUN1-233	ENST00000488628	TMEM176A	Q96HP8	235 aa		18.02	■□□□□ 0.48
SUN1-233	ENST00000488628	NACA2	Q9H009	215 aa		18.02	■□□□□ 0.48
SUN1-233	ENST00000488628	ZDHHC4	Q9NPG8	344 aa		18.02	■□□□□ 0.48
SUN1-233	ENST00000488628	CYLD	Q9NQC7	956 aa		18.02	■□□□□ 0.48
SUN1-233	ENST00000488628	TBC1D14	Q9P2M4	693 aa		18.02	■□□□□ 0.48
SUN1-233	ENST00000488628	PPP1R3G	B7ZBB8	358 aa		18.01	■□□□□ 0.47
SUN1-233	ENST00000488628	RPP40	O75818	363 aa	Known RBP	18.01	■□□□□ 0.47
SUN1-233	ENST00000488628	ADH1C	P00326	375 aa		18.01	■□□□□ 0.47
SUN1-233	ENST00000488628	HNRNPL	P14866	589 aa	Known RBP eCLIP	18.01	■□□□□ 0.47
SUN1-233	ENST00000488628	KDSR	Q06136	332 aa		18.01	■□□□□ 0.47
SUN1-233	ENST00000488628	LRMP	Q12912	555 aa		18.01	■□□□□ 0.47
SUN1-233	ENST00000488628	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	18.01	■□□□□ 0.47
SUN1-233	ENST00000488628	ELOA2	Q8IYF1	753 aa	Predicted RBP	18.01	■□□□□ 0.47
SUN1-233	ENST00000488628	PHTF2	Q8N3S3	785 aa		18.01	■□□□□ 0.47
SUN1-233	ENST00000488628	CAMKK1	Q8N5S9	505 aa		18.01	■□□□□ 0.47
SUN1-233	ENST00000488628	FAXDC2	Q96IV6	333 aa		18.01	■□□□□ 0.47
SUN1-233	ENST00000488628	PNKP	Q96T60	521 aa		18.01	■□□□□ 0.47
SUN1-233	ENST00000488628	PNPLA8	Q9NP80	782 aa		18.01	■□□□□ 0.47
SUN1-233	ENST00000488628	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	18.01	■□□□□ 0.47
SUN1-233	ENST00000488628	DLL3	Q9NYJ7	618 aa		18.01	■□□□□ 0.47
SUN1-233	ENST00000488628	ARMCX3	Q9UH62	379 aa	Predicted RBP	18.01	■□□□□ 0.47
SUN1-233	ENST00000488628	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	18.01	■□□□□ 0.47
SUN1-233	ENST00000488628	USP3	Q9Y6I4	520 aa		18.01	■□□□□ 0.47
SUN1-233	ENST00000488628	THADA	Q6YHU6	1953 aa		18	■□□□□ 0.47
SUN1-233	ENST00000488628	CCDC163	A0A0D9SF12	145 aa		18	■□□□□ 0.47
SUN1-233	ENST00000488628	TULP2	O00295	520 aa		18	■□□□□ 0.47
SUN1-233	ENST00000488628	BIN1	O00499	593 aa		18	■□□□□ 0.47
SUN1-233	ENST00000488628	DCLK1	O15075	740 aa		18	■□□□□ 0.47
SUN1-233	ENST00000488628	TRIM24	O15164	1050 aa		18	■□□□□ 0.47
SUN1-233	ENST00000488628	AXIN1	O15169	862 aa		18	■□□□□ 0.47
SUN1-233	ENST00000488628	KAT7	O95251	611 aa		18	■□□□□ 0.47
SUN1-233	ENST00000488628	RARG	P13631	454 aa		18	■□□□□ 0.47
SUN1-233	ENST00000488628	TRIM21	P19474	475 aa	Known RBP	18	■□□□□ 0.47
SUN1-233	ENST00000488628	ATP5C1	P36542	298 aa	Known RBP	18	■□□□□ 0.47
SUN1-233	ENST00000488628	KLHL10	Q6JEL2	608 aa		18	■□□□□ 0.47
SUN1-233	ENST00000488628	HTR3D	Q70Z44	454 aa		18	■□□□□ 0.47

Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms