RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 XYLT2Q9H1B5 865 aa20.21■□□□□ 0.83
GGPS1-206ENST00000488594 ZSCAN16Q9H4T2 348 aaPredicted RBP20.21■□□□□ 0.83
GGPS1-206ENST00000488594 DMAP1Q9NPF5 467 aaPredicted RBP20.21■□□□□ 0.83
GGPS1-206ENST00000488594 SPHK2Q9NRA0 654 aa20.21■□□□□ 0.83
GGPS1-206ENST00000488594 CACNA1GO43497 2377 aa20.21■□□□□ 0.83
GGPS1-206ENST00000488594 ITPKAP23677 461 aa20.21■□□□□ 0.83
GGPS1-206ENST00000488594 RDXP35241 583 aaKnown RBP20.21■□□□□ 0.83
GGPS1-206ENST00000488594 NASPP49321 788 aaPredicted RBP20.21■□□□□ 0.83
GGPS1-206ENST00000488594 CYP2J2P51589 502 aa20.21■□□□□ 0.83
GGPS1-206ENST00000488594 MYL6P60660 151 aa20.21■□□□□ 0.83
GGPS1-206ENST00000488594 RPL6Q02878 288 aaKnown RBP20.21■□□□□ 0.83
GGPS1-206ENST00000488594 E2F4Q16254 413 aa20.21■□□□□ 0.83
GGPS1-206ENST00000488594 C10orf76Q5T2E6 689 aa20.21■□□□□ 0.83
GGPS1-206ENST00000488594 TERB1Q8NA31 727 aa20.21■□□□□ 0.83
GGPS1-206ENST00000488594 SMARCD1Q96GM5 515 aa20.21■□□□□ 0.83
GGPS1-206ENST00000488594 KCNK16Q96T55 309 aa20.21■□□□□ 0.83
GGPS1-206ENST00000488594 NACA2Q9H009 215 aa20.21■□□□□ 0.83
GGPS1-206ENST00000488594 VRTNQ9H8Y1 702 aa20.21■□□□□ 0.83
GGPS1-206ENST00000488594 ZDHHC4Q9NPG8 344 aa20.21■□□□□ 0.83
GGPS1-206ENST00000488594 IL37Q9NZH6 218 aa20.21■□□□□ 0.83
GGPS1-206ENST00000488594 CGNQ9P2M7 1197 aaKnown RBP20.21■□□□□ 0.83
GGPS1-206ENST00000488594 CHORDC1Q9UHD1 332 aaPredicted RBP20.21■□□□□ 0.83
GGPS1-206ENST00000488594 STARD13Q9Y3M8 1113 aa20.21■□□□□ 0.83
GGPS1-206ENST00000488594 ATXN2Q99700 1313 aaKnown RBP20.2■□□□□ 0.82
GGPS1-206ENST00000488594 PHACTR2O75167 634 aa20.2■□□□□ 0.82
GGPS1-206ENST00000488594 ZNF217O75362 1048 aa20.2■□□□□ 0.82
GGPS1-206ENST00000488594 SERPINF2P08697 491 aa20.2■□□□□ 0.82
GGPS1-206ENST00000488594 ZDHHC11BP0C7U3 371 aa20.2■□□□□ 0.82
GGPS1-206ENST00000488594 SLC5A3P53794 718 aa20.2■□□□□ 0.82
GGPS1-206ENST00000488594 ANO4Q32M45 955 aa20.2■□□□□ 0.82
GGPS1-206ENST00000488594 FAM35AQ86V20 835 aa20.2■□□□□ 0.82
GGPS1-206ENST00000488594 BBS7Q8IWZ6 715 aa20.2■□□□□ 0.82
GGPS1-206ENST00000488594 NAT16Q8N8M0 369 aa20.2■□□□□ 0.82
GGPS1-206ENST00000488594 ZCCHC14Q8WYQ9 949 aaKnown RBP20.2■□□□□ 0.82
GGPS1-206ENST00000488594 MED10Q9BTT4 135 aa20.2■□□□□ 0.82
GGPS1-206ENST00000488594 IGF2RP11717 2491 aa20.19■□□□□ 0.82
GGPS1-206ENST00000488594 FAM92AA1XBS5 289 aa20.19■□□□□ 0.82
GGPS1-206ENST00000488594 H0Y626 953 aa20.19■□□□□ 0.82
GGPS1-206ENST00000488594 TRIM16O95361 564 aa20.19■□□□□ 0.82
GGPS1-206ENST00000488594 HOXB2P14652 356 aa20.19■□□□□ 0.82
GGPS1-206ENST00000488594 GABRG2P18507 467 aa20.19■□□□□ 0.82
GGPS1-206ENST00000488594 NTSR1P30989 418 aa20.19■□□□□ 0.82
GGPS1-206ENST00000488594 SIM1P81133 766 aaPredicted RBP20.19■□□□□ 0.82
GGPS1-206ENST00000488594 HNRNPDQ14103 355 aaKnown RBP20.19■□□□□ 0.82
GGPS1-206ENST00000488594 STK38Q15208 465 aa20.19■□□□□ 0.82
GGPS1-206ENST00000488594 SDE2Q6IQ49 451 aa20.19■□□□□ 0.82
GGPS1-206ENST00000488594 KIAA1211LQ6NV74 962 aa20.19■□□□□ 0.82
GGPS1-206ENST00000488594 TMEM25Q86YD3 366 aa20.19■□□□□ 0.82
GGPS1-206ENST00000488594 C12orf56Q8IXR9 622 aa20.19■□□□□ 0.82
GGPS1-206ENST00000488594 IQUBQ8NA54 791 aa20.19■□□□□ 0.82
GGPS1-206ENST00000488594 SCAMP5Q8TAC9 235 aa20.19■□□□□ 0.82
GGPS1-206ENST00000488594 SCFD1Q8WVM8 642 aa20.19■□□□□ 0.82
GGPS1-206ENST00000488594 ZNF516Q92618 1163 aa20.19■□□□□ 0.82
GGPS1-206ENST00000488594 CCSER2Q9H7U1 834 aa20.19■□□□□ 0.82
GGPS1-206ENST00000488594 CAPN10Q9HC96 672 aa20.19■□□□□ 0.82
GGPS1-206ENST00000488594 CALCOCO1Q9P1Z2 691 aa20.19■□□□□ 0.82
GGPS1-206ENST00000488594 MSRB2Q9Y3D2 182 aa20.19■□□□□ 0.82
GGPS1-206ENST00000488594 SRRM3A6NNA2 597 aaPredicted RBP20.18■□□□□ 0.82
GGPS1-206ENST00000488594 CLIC2O15247 247 aa20.18■□□□□ 0.82
GGPS1-206ENST00000488594 HYAL3O43820 417 aaPredicted RBP20.18■□□□□ 0.82
GGPS1-206ENST00000488594 OPHN1O60890 802 aa20.18■□□□□ 0.82
GGPS1-206ENST00000488594 AP3M2P53677 418 aa20.18■□□□□ 0.82
GGPS1-206ENST00000488594 ZNF33AQ06730 810 aa20.18■□□□□ 0.82
GGPS1-206ENST00000488594 ZNF699Q32M78 642 aa20.18■□□□□ 0.82
GGPS1-206ENST00000488594 NELFCDQ8IXH7 590 aa20.18■□□□□ 0.82
GGPS1-206ENST00000488594 LINC00301Q8NCQ3 95 aa20.18■□□□□ 0.82
GGPS1-206ENST00000488594 C7orf25Q9BPX7 421 aa20.18■□□□□ 0.82
GGPS1-206ENST00000488594 GTPBP2Q9BX10 602 aaKnown RBP20.18■□□□□ 0.82
GGPS1-206ENST00000488594 GZF1Q9H116 711 aaPredicted RBP20.18■□□□□ 0.82
GGPS1-206ENST00000488594 FBXO44Q9H4M3 255 aa20.18■□□□□ 0.82
GGPS1-206ENST00000488594 SMYD3Q9H7B4 428 aa20.18■□□□□ 0.82
GGPS1-206ENST00000488594 MAGEF1Q9HAY2 307 aa20.18■□□□□ 0.82
GGPS1-206ENST00000488594 GMIPQ9P107 970 aa20.18■□□□□ 0.82
GGPS1-206ENST00000488594 MTMR6Q9Y217 621 aa20.18■□□□□ 0.82
GGPS1-206ENST00000488594 ASCC3Q8N3C0 2202 aaKnown RBP20.18■□□□□ 0.82
GGPS1-206ENST00000488594 PLXND1Q9Y4D7 1925 aa20.18■□□□□ 0.82
GGPS1-206ENST00000488594 SPAARA0A1B0GVQ0 90 aa20.17■□□□□ 0.82
GGPS1-206ENST00000488594 PPP6R2O75170 966 aa20.17■□□□□ 0.82
GGPS1-206ENST00000488594 ZNF667Q5HYK9 610 aa20.17■□□□□ 0.82
GGPS1-206ENST00000488594 GRAMD4Q6IC98 578 aa20.17■□□□□ 0.82
GGPS1-206ENST00000488594 PAQR9Q6ZVX9 377 aa20.17■□□□□ 0.82
GGPS1-206ENST00000488594 UNC13DQ70J99 1090 aa20.17■□□□□ 0.82
GGPS1-206ENST00000488594 HTR3DQ70Z44 454 aa20.17■□□□□ 0.82
GGPS1-206ENST00000488594 DHX58Q96C10 678 aa20.17■□□□□ 0.82
GGPS1-206ENST00000488594 INTS4Q96HW7 963 aaKnown RBP20.17■□□□□ 0.82
GGPS1-206ENST00000488594 XPO6Q96QU8 1125 aaKnown RBP20.17■□□□□ 0.82
GGPS1-206ENST00000488594 KRT82Q9NSB4 513 aa20.17■□□□□ 0.82
GGPS1-206ENST00000488594 TNRC6BQ9UPQ9 1833 aaKnown RBP20.17■□□□□ 0.82
GGPS1-206ENST00000488594 IGHV1OR15-9A0A0B4J2B8 117 aa20.16■□□□□ 0.82
GGPS1-206ENST00000488594 A0A1W2PQF6 199 aa20.16■□□□□ 0.82
GGPS1-206ENST00000488594 SPTLC2O15270 562 aa20.16■□□□□ 0.82
GGPS1-206ENST00000488594 CACNG3O60359 315 aa20.16■□□□□ 0.82
GGPS1-206ENST00000488594 TLR5O60602 858 aa20.16■□□□□ 0.82
GGPS1-206ENST00000488594 EXOC3O60645 756 aa20.16■□□□□ 0.82
GGPS1-206ENST00000488594 CLSTN1O94985 981 aa20.16■□□□□ 0.82
GGPS1-206ENST00000488594 SYPP08247 313 aa20.16■□□□□ 0.82
GGPS1-206ENST00000488594 CDH8P55286 799 aa20.16■□□□□ 0.82
GGPS1-206ENST00000488594 EHHADHQ08426 723 aa20.16■□□□□ 0.82
GGPS1-206ENST00000488594 GOLGA8FQ08AF8 430 aa20.16■□□□□ 0.82
GGPS1-206ENST00000488594 GOLGA8DPQ0D2H9 430 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms