RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 TRMT2BQ96GJ1 504 aaKnown RBP6.28□□□□□ -1.4
COL4A3-206ENST00000487633 PRR11Q96HE9 360 aaPredicted RBP6.28□□□□□ -1.4
COL4A3-206ENST00000487633 VCPIP1Q96JH7 1222 aa6.28□□□□□ -1.4
COL4A3-206ENST00000487633 MTMR9Q96QG7 549 aa6.28□□□□□ -1.4
COL4A3-206ENST00000487633 PYM1Q9BRP8 204 aaKnown RBP6.28□□□□□ -1.4
COL4A3-206ENST00000487633 ESYT1Q9BSJ8 1104 aa6.28□□□□□ -1.4
COL4A3-206ENST00000487633 EPN3Q9H201 632 aa6.28□□□□□ -1.4
COL4A3-206ENST00000487633 IKZF4Q9H2S9 585 aa6.28□□□□□ -1.4
COL4A3-206ENST00000487633 SH3GLB2Q9NR46 395 aa6.28□□□□□ -1.4
COL4A3-206ENST00000487633 ARHGAP28Q9P2N2 729 aa6.28□□□□□ -1.4
COL4A3-206ENST00000487633 GTF3C4Q9UKN8 822 aa6.28□□□□□ -1.4
COL4A3-206ENST00000487633 CLCA2Q9UQC9 943 aa6.28□□□□□ -1.4
COL4A3-206ENST00000487633 STARD13Q9Y3M8 1113 aa6.28□□□□□ -1.4
COL4A3-206ENST00000487633 NME7Q9Y5B8 376 aa6.28□□□□□ -1.4
COL4A3-206ENST00000487633 PCDHGA1Q9Y5H4 931 aa6.28□□□□□ -1.4
COL4A3-206ENST00000487633 AKAP9Q99996 3911 aa6.28□□□□□ -1.4
COL4A3-206ENST00000487633 RP1P56715 2156 aa6.27□□□□□ -1.41
COL4A3-206ENST00000487633 CCDC169A6NNP5 214 aa6.27□□□□□ -1.41
COL4A3-206ENST00000487633 CYB561D2O14569 222 aa6.27□□□□□ -1.41
COL4A3-206ENST00000487633 PAPSS1O43252 624 aaPredicted RBP6.27□□□□□ -1.41
COL4A3-206ENST00000487633 GREM1O60565 184 aa6.27□□□□□ -1.41
COL4A3-206ENST00000487633 MT-CO3P00414 261 aa6.27□□□□□ -1.41
COL4A3-206ENST00000487633 OAS1P00973 400 aaKnown RBP6.27□□□□□ -1.41
COL4A3-206ENST00000487633 CISD3P0C7P0 127 aa6.27□□□□□ -1.41
COL4A3-206ENST00000487633 WT1P19544 449 aaPredicted RBP6.27□□□□□ -1.41
COL4A3-206ENST00000487633 PDIA3P30101 505 aaKnown RBP6.27□□□□□ -1.41
COL4A3-206ENST00000487633 RCAN1P53805 252 aa6.27□□□□□ -1.41
COL4A3-206ENST00000487633 RPL10AP62906 217 aaKnown RBP6.27□□□□□ -1.41
COL4A3-206ENST00000487633 SLC7A9P82251 487 aa6.27□□□□□ -1.41
COL4A3-206ENST00000487633 SUZ12Q15022 739 aaKnown RBP6.27□□□□□ -1.41
COL4A3-206ENST00000487633 SPATA1Q5VX52 437 aa6.27□□□□□ -1.41
COL4A3-206ENST00000487633 IL27RAQ6UWB1 636 aa6.27□□□□□ -1.41
COL4A3-206ENST00000487633 SCN4BQ8IWT1 228 aa6.27□□□□□ -1.41
COL4A3-206ENST00000487633 CADM4Q8NFZ8 388 aa6.27□□□□□ -1.41
COL4A3-206ENST00000487633 CCDC26Q8TAB7 109 aa6.27□□□□□ -1.41
COL4A3-206ENST00000487633 IGSF8Q969P0 613 aa6.27□□□□□ -1.41
COL4A3-206ENST00000487633 CCDC43Q96MW1 224 aaKnown RBP6.27□□□□□ -1.41
COL4A3-206ENST00000487633 SLC6A18Q96N87 628 aa6.27□□□□□ -1.41
COL4A3-206ENST00000487633 NACC1Q96RE7 527 aa6.27□□□□□ -1.41
COL4A3-206ENST00000487633 TCHPQ9BT92 498 aa6.27□□□□□ -1.41
COL4A3-206ENST00000487633 OXCT2Q9BYC2 517 aaPredicted RBP6.27□□□□□ -1.41
COL4A3-206ENST00000487633 MRPL4Q9BYD3 311 aaKnown RBP6.27□□□□□ -1.41
COL4A3-206ENST00000487633 ZMYM5Q9UJ78 669 aa6.27□□□□□ -1.41
COL4A3-206ENST00000487633 CLEC4EQ9ULY5 219 aa6.27□□□□□ -1.41
COL4A3-206ENST00000487633 UBQLN1Q9UMX0 589 aaKnown RBP6.27□□□□□ -1.41
COL4A3-206ENST00000487633 PCDHA12Q9UN75 941 aa6.27□□□□□ -1.41
COL4A3-206ENST00000487633 PCDHB5Q9Y5E4 795 aa6.27□□□□□ -1.41
COL4A3-206ENST00000487633 SCN8AQ9UQD0 1980 aa6.27□□□□□ -1.41
COL4A3-206ENST00000487633 PHLPP2Q6ZVD8 1323 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 ZNF840PA6NDX5 716 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 TISP43B9A030 160 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 ADRB2P07550 413 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 XRCC6P12956 609 aaKnown RBP eCLIP6.26□□□□□ -1.41
COL4A3-206ENST00000487633 CYP3A5P20815 502 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 PRKCHP24723 683 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 AFF3P51826 1226 aaKnown RBP6.26□□□□□ -1.41
COL4A3-206ENST00000487633 RIPPLY3P57055 190 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 CYP4F2P78329 520 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 AKAP17AQ02040 695 aaKnown RBP6.26□□□□□ -1.41
COL4A3-206ENST00000487633 ST3GAL1Q11201 340 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 CLN3Q13286 438 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 PDIA5Q14554 519 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 NOLC1Q14978 699 aaKnown RBP eCLIP6.26□□□□□ -1.41
COL4A3-206ENST00000487633 CLCA4Q14CN2 919 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 TGIF1Q15583 401 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 ANO4Q32M45 955 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 ARL13BQ3SXY8 428 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 BROXQ5VW32 411 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 KCNK18Q7Z418 384 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 TMPRSS6Q8IU80 811 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 ZNF366Q8N895 744 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 ZSWIM2Q8NEG5 633 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 SORCS1Q8WY21 1168 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 RFFLQ8WZ73 363 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 BHMTQ93088 406 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 FAM212AQ96EL1 285 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 ZNF578Q96N58 590 aaPredicted RBP6.26□□□□□ -1.41
COL4A3-206ENST00000487633 RUSC1Q9BVN2 902 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 BHMT2Q9H2M3 363 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 TMEM134Q9H6X4 195 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 ANO2Q9NQ90 1003 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 DNAJC17Q9NVM6 304 aaKnown RBP6.26□□□□□ -1.41
COL4A3-206ENST00000487633 PLK2Q9NYY3 685 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 DEC1Q9P2X7 70 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 PLEKHB1Q9UF11 243 aaPredicted RBP6.26□□□□□ -1.41
COL4A3-206ENST00000487633 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.26□□□□□ -1.41
COL4A3-206ENST00000487633 NFE2L3Q9Y4A8 694 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 STON1Q9Y6Q2 735 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 NYNRINQ9P2P1 1898 aaKnown RBP6.26□□□□□ -1.41
COL4A3-206ENST00000487633 CENPEQ02224 2701 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 OTOGQ6ZRI0 2925 aa6.26□□□□□ -1.41
COL4A3-206ENST00000487633 F8P00451 2351 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 SETD2Q9BYW2 2564 aaPredicted RBP6.25□□□□□ -1.41
COL4A3-206ENST00000487633 ARHGEF35A5YM69 484 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 E9PMD0 336 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 TRIM38O00635 465 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 HOXC11O43248 304 aaPredicted RBP6.25□□□□□ -1.41
COL4A3-206ENST00000487633 SDC3O75056 442 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 HIP1RO75146 1068 aa6.25□□□□□ -1.41
COL4A3-206ENST00000487633 USP12O75317 370 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms