RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 SCUBE3Q8IX30 993 aa13.82□□□□□ -0.2
HDLBP-241ENST00000487169 PORCNQ9H237 461 aa13.82□□□□□ -0.2
HDLBP-241ENST00000487169 TRIM45Q9H8W5 580 aaPredicted RBP13.82□□□□□ -0.2
HDLBP-241ENST00000487169 LRRC40Q9H9A6 602 aa13.82□□□□□ -0.2
HDLBP-241ENST00000487169 CHST12Q9NRB3 414 aa13.82□□□□□ -0.2
HDLBP-241ENST00000487169 UBP1Q9NZI7 540 aa13.82□□□□□ -0.2
HDLBP-241ENST00000487169 VPS9D1Q9Y2B5 631 aa13.82□□□□□ -0.2
HDLBP-241ENST00000487169 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.82□□□□□ -0.2
HDLBP-241ENST00000487169 HEATR9A2RTY3 570 aa13.82□□□□□ -0.2
HDLBP-241ENST00000487169 TBKBP1A7MCY6 615 aa13.82□□□□□ -0.2
HDLBP-241ENST00000487169 SUPT7LO94864 414 aa13.82□□□□□ -0.2
HDLBP-241ENST00000487169 ITGB5P18084 799 aa13.82□□□□□ -0.2
HDLBP-241ENST00000487169 CHI3L2Q15782 390 aa13.82□□□□□ -0.2
HDLBP-241ENST00000487169 TTLL9Q3SXZ7 439 aa13.82□□□□□ -0.2
HDLBP-241ENST00000487169 SH3RF1Q7Z6J0 888 aa13.82□□□□□ -0.2
HDLBP-241ENST00000487169 ZNF410Q86VK4 478 aa13.82□□□□□ -0.2
HDLBP-241ENST00000487169 TBC1D19Q8N5T2 526 aa13.82□□□□□ -0.2
HDLBP-241ENST00000487169 DTX3LQ8TDB6 740 aa13.82□□□□□ -0.2
HDLBP-241ENST00000487169 KAT5Q92993 513 aa13.82□□□□□ -0.2
HDLBP-241ENST00000487169 WDR18Q9BV38 432 aa13.82□□□□□ -0.2
HDLBP-241ENST00000487169 CIPCQ9C0C6 399 aa13.82□□□□□ -0.2
HDLBP-241ENST00000487169 ENTPD7Q9NQZ7 604 aa13.82□□□□□ -0.2
HDLBP-241ENST00000487169 ADGRA2Q96PE1 1338 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 CNTNAP2Q9UHC6 1331 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 PDHA1P08559 390 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 CCR1P32246 355 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 OXCT1P55809 520 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 CCDC15Q0P6D6 951 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 ZNF268Q14587 947 aaPredicted RBP13.81□□□□□ -0.2
HDLBP-241ENST00000487169 PCYOX1LQ8NBM8 494 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 FAM136AQ96C01 138 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 MTBPQ96DY7 904 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 RBM22Q9NW64 420 aaKnown RBP eCLIP13.81□□□□□ -0.21e-6■■■□□ 17.1
HDLBP-241ENST00000487169 SMPD4Q9NXE4 827 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.81□□□□□ -0.2
HDLBP-241ENST00000487169 SLC4A7Q9Y6M7 1214 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 ARHGAP10A1A4S6 786 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 LRRC10BA6NIK2 292 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 ZSCAN9O15535 394 aaPredicted RBP13.81□□□□□ -0.2
HDLBP-241ENST00000487169 EEF1DP29692 281 aaKnown RBP13.81□□□□□ -0.2
HDLBP-241ENST00000487169 WEE1P30291 646 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 PPP3CAQ08209 521 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 LRRC74AQ0VAA2 488 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 BTG3Q14201 252 aaPredicted RBP13.81□□□□□ -0.2
HDLBP-241ENST00000487169 SLC2A14Q8TDB8 520 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 UCMAQ8WVF2 138 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 SEC16BQ96JE7 1060 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 ADAM2Q99965 735 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 BRD8Q9H0E9 1235 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 MANSC1Q9H8J5 431 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 SNX5Q9Y5X3 404 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 B2RBV5 119 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 CBX4O00257 560 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 ATP9AO75110 1047 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 TIGD7Q6NT04 549 aaPredicted RBP13.81□□□□□ -0.2
HDLBP-241ENST00000487169 ZNF467Q7Z7K2 595 aaPredicted RBP13.81□□□□□ -0.2
HDLBP-241ENST00000487169 IL31RAQ8NI17 732 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 PPP1R13LQ8WUF5 828 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 TEKT4Q8WW24 435 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 KAT2BQ92831 832 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 VCPIP1Q96JH7 1222 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 THTPAQ9BU02 230 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 CDC42EP4Q9H3Q1 356 aaKnown RBP13.81□□□□□ -0.2
HDLBP-241ENST00000487169 PCDHB5Q9Y5E4 795 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 RIC1Q4ADV7 1423 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 LRRIQ3A6PVS8 624 aaPredicted RBP13.81□□□□□ -0.2
HDLBP-241ENST00000487169 SOX11P35716 441 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 GJC2Q5T442 439 aaPredicted RBP13.81□□□□□ -0.2
HDLBP-241ENST00000487169 TRPM8Q7Z2W7 1104 aa13.81□□□□□ -0.2
HDLBP-241ENST00000487169 EPS8L3Q8TE67 593 aaKnown RBP13.81□□□□□ -0.2
HDLBP-241ENST00000487169 CELF6Q96J87 481 aaKnown RBP13.81□□□□□ -0.2
HDLBP-241ENST00000487169 TRMT6Q9UJA5 497 aaKnown RBP13.81□□□□□ -0.2
HDLBP-241ENST00000487169 HNRNPCL1O60812 293 aaKnown RBP13.8□□□□□ -0.2
HDLBP-241ENST00000487169 RHOCP08134 193 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 DDX5P17844 614 aaKnown RBP13.8□□□□□ -0.2
HDLBP-241ENST00000487169 EPHB3P54753 998 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 INHBEP58166 350 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 POU4F1Q01851 419 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 PRAMEF19Q5SWL8 479 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 WDR59Q6PJI9 974 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 KIAA0319LQ8IZA0 1049 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 CARNMT1Q8N4J0 409 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 CNTRLQ7Z7A1 2325 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 NFASCO94856 1347 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 PIK3CDO00329 1044 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 KLHL2O95198 593 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 RARS2Q5T160 578 aaKnown RBP13.8□□□□□ -0.2
HDLBP-241ENST00000487169 C11orf63Q6NUN7 778 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 ILDR2Q71H61 639 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 TRPM4Q8TD43 1214 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 KCNK16Q96T55 309 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 TBCBQ99426 244 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 ANKZF1Q9H8Y5 726 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 NT5MQ9NPB1 228 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 WHRNQ9P202 907 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 KCNK1O00180 336 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 MAP2K7O14733 419 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 SOAT2O75908 522 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 PGK1P00558 417 aa13.8□□□□□ -0.2
HDLBP-241ENST00000487169 CYP2F1P24903 491 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms