RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 HDXQ7Z353 690 aa7.37□□□□□ -1.23
SF3A3-206ENST00000487062 SCML4Q8N228 414 aa7.37□□□□□ -1.23
SF3A3-206ENST00000487062 PRELID2Q8N945 189 aa7.37□□□□□ -1.23
SF3A3-206ENST00000487062 CMASQ8NFW8 434 aaPredicted RBP7.37□□□□□ -1.23
SF3A3-206ENST00000487062 DIS3LQ8TF46 1054 aaKnown RBP7.37□□□□□ -1.23
SF3A3-206ENST00000487062 FAM172AQ8WUF8 416 aa7.37□□□□□ -1.23
SF3A3-206ENST00000487062 HDAC7Q8WUI4 952 aa7.37□□□□□ -1.23
SF3A3-206ENST00000487062 TEKT4Q8WW24 435 aa7.37□□□□□ -1.23
SF3A3-206ENST00000487062 IRGQQ8WZA9 623 aa7.37□□□□□ -1.23
SF3A3-206ENST00000487062 CFAP57Q96MR6 1250 aa7.37□□□□□ -1.23
SF3A3-206ENST00000487062 SMOQ99835 787 aa7.37□□□□□ -1.23
SF3A3-206ENST00000487062 RTP3Q9BQQ7 232 aa7.37□□□□□ -1.23
SF3A3-206ENST00000487062 DDX23Q9BUQ8 820 aaKnown RBP7.37□□□□□ -1.23
SF3A3-206ENST00000487062 TRIM62Q9BVG3 475 aa7.37□□□□□ -1.23
SF3A3-206ENST00000487062 HEMGNQ9BXL5 484 aa7.37□□□□□ -1.23
SF3A3-206ENST00000487062 ADAM33Q9BZ11 813 aa7.37□□□□□ -1.23
SF3A3-206ENST00000487062 FRMD8P1Q9BZ68 369 aaPredicted RBP7.37□□□□□ -1.23
SF3A3-206ENST00000487062 DCLK3Q9C098 648 aa7.37□□□□□ -1.23
SF3A3-206ENST00000487062 CSNK1G1Q9HCP0 422 aa7.37□□□□□ -1.23
SF3A3-206ENST00000487062 PNPLA8Q9NP80 782 aa7.37□□□□□ -1.23
SF3A3-206ENST00000487062 NGRNQ9NPE2 291 aaKnown RBP7.37□□□□□ -1.23
SF3A3-206ENST00000487062 RRN3Q9NYV6 651 aa7.37□□□□□ -1.23
SF3A3-206ENST00000487062 DNAJB4Q9UDY4 337 aa7.37□□□□□ -1.23
SF3A3-206ENST00000487062 PCSK1NQ9UHG2 260 aa7.37□□□□□ -1.23
SF3A3-206ENST00000487062 AMACRQ9UHK6 382 aa7.37□□□□□ -1.23
SF3A3-206ENST00000487062 NR2E1Q9Y466 385 aa7.37□□□□□ -1.23
SF3A3-206ENST00000487062 VWA8A3KMH1 1905 aa7.37□□□□□ -1.23
SF3A3-206ENST00000487062 MYO16Q9Y6X6 1858 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 hCG_1818297A0A087WSY0 165 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 TCRBV7S2A1N4TA0A589 114 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 CAPN9O14815 690 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 B4GALT3O60512 393 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 BEST1O76090 585 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 SEC31AO94979 1220 aaKnown RBP7.36□□□□□ -1.23
SF3A3-206ENST00000487062 UPP2O95045 317 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 ECEL1O95672 775 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 ZBED1O96006 694 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 TIMP1P01033 207 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 AMHP03971 560 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 TCF4P15884 667 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 RAG1P15918 1043 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 BDNFP23560 247 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 MATKP42679 507 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 CDKN2BP42772 138 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 TNNT3P45378 269 aaPredicted RBP7.36□□□□□ -1.23
SF3A3-206ENST00000487062 SLC11A1P49279 550 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 SULT1E1P49888 294 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 GATMP50440 423 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 DRG2P55039 364 aaKnown RBP7.36□□□□□ -1.23
SF3A3-206ENST00000487062 CDH6P55285 790 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 DAOAP59103 153 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 MRPS25P82663 173 aaKnown RBP7.36□□□□□ -1.23
SF3A3-206ENST00000487062 SMARCB1Q12824 385 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 GPS2Q13227 327 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 KLF1Q13351 362 aaPredicted RBP7.36□□□□□ -1.23
SF3A3-206ENST00000487062 NNTQ13423 1086 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 TFDP2Q14188 446 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 HLTFQ14527 1009 aaKnown RBP eCLIP7.36□□□□□ -1.233e-7■□□□□ 8.3
SF3A3-206ENST00000487062 KRT81Q14533 505 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 PPP1R7Q15435 360 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 SIX1Q15475 284 aaPredicted RBP7.36□□□□□ -1.23
SF3A3-206ENST00000487062 CCDC142Q17RM4 750 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 LRRC26Q2I0M4 334 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 TCTN1Q2MV58 587 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 C15orf59Q2T9L4 293 aaPredicted RBP7.36□□□□□ -1.23
SF3A3-206ENST00000487062 CTXN3Q4LDR2 81 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 ATP13A4Q4VNC1 1196 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 SLC39A12Q504Y0 691 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 RAB41Q5JT25 222 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 VARS2Q5ST30 1063 aaKnown RBP7.36□□□□□ -1.23
SF3A3-206ENST00000487062 BEND6Q5SZJ8 279 aaPredicted RBP7.36□□□□□ -1.23
SF3A3-206ENST00000487062 ERMARDQ5T6L9 678 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 FAM171A1Q5VUB5 890 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 KAZNQ674X7 775 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 SCYL2Q6P3W7 929 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 FUT10Q6P4F1 479 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 VSIG1Q86XK7 387 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 JAMLQ86YT9 394 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 DEFB106AQ8N104 65 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 CRIPAKQ8N1N5 446 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 TMEM199Q8N511 208 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 ARFGAP1Q8N6T3 406 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 OR10T2Q8NGX3 314 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 ATL2Q8NHH9 583 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 CLEC4CQ8WTT0 213 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 CASKIN2Q8WXE0 1202 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 IFT81Q8WYA0 676 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 RAPGEF5Q92565 580 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 HSPH1Q92598 858 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 KHSRPQ92945 711 aaKnown RBP eCLIP7.36□□□□□ -1.23
SF3A3-206ENST00000487062 SLCO2A1Q92959 643 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 FUBP3Q96I24 572 aaKnown RBP eCLIP7.36□□□□□ -1.23
SF3A3-206ENST00000487062 PIWIL1Q96J94 861 aaKnown RBP7.36□□□□□ -1.23
SF3A3-206ENST00000487062 PKMYT1Q99640 499 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 ERP44Q9BS26 406 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 MAK16Q9BXY0 300 aaKnown RBP7.36□□□□□ -1.23
SF3A3-206ENST00000487062 ULBP1Q9BZM6 244 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 FAM129AQ9BZQ8 928 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 ZCWPW1Q9H0M4 648 aa7.36□□□□□ -1.23
SF3A3-206ENST00000487062 POPDC2Q9HBU9 364 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms