RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 INF2Q27J81 1249 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 ZC3H12BQ5HYM0 836 aaKnown RBP7.32□□□□□ -1.24
HDAC3-209ENST00000486618 FAM78AQ5JUQ0 283 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 N4BP2L1Q5TBK1 243 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-209ENST00000486618 KIAA1614Q5VZ46 1190 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 ISM2Q6H9L7 571 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 NCAPH2Q6IBW4 605 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 BLOC1S2Q6QNY1 142 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 Q6ZS46 218 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 PDZD4Q76G19 769 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-209ENST00000486618 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.32□□□□□ -1.24
HDAC3-209ENST00000486618 TAX1BP1Q86VP1 789 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 CDR2LQ86X02 465 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-209ENST00000486618 TPH2Q8IWU9 490 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 SLFN12Q8IYM2 578 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 ELMOD1Q8N336 334 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 FBXL16Q8N461 479 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 DAGLBQ8NCG7 672 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 ZNF461Q8TAF7 563 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 DYDC2Q96IM9 177 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 ZNF396Q96N95 335 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-209ENST00000486618 ADPGKQ9BRR6 497 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 AP1M1Q9BXS5 423 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 ADAM19Q9H013 955 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 TSPYL1Q9H0U9 437 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 ZNF334Q9HCZ1 680 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-209ENST00000486618 KCNMB3Q9NPA1 279 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 XPNPEP1Q9NQW7 623 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 PRMT7Q9NVM4 692 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-209ENST00000486618 TRMT1Q9NXH9 659 aaKnown RBP7.32□□□□□ -1.24
HDAC3-209ENST00000486618 KCNK4Q9NYG8 393 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 RGL1Q9NZL6 768 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 CPSF2Q9P2I0 782 aaKnown RBP7.32□□□□□ -1.24
HDAC3-209ENST00000486618 WRAP73Q9P2S5 460 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-209ENST00000486618 RABL2AQ9UBK7 228 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-209ENST00000486618 CACNG4Q9UBN1 327 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 PCSK1NQ9UHG2 260 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 TPCN1Q9ULQ1 816 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 TTLL3Q9Y4R7 772 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 CDY1Q9Y6F8 540 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 PIAS3Q9Y6X2 628 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 CEP295Q9C0D2 2601 aa7.32□□□□□ -1.24
HDAC3-209ENST00000486618 ARID2Q68CP9 1835 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 TRIP11Q15643 1979 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 TICRRQ7Z2Z1 1910 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 A6NCN8 305 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 TMEM189-UBE2V1I3L0A0 370 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 FOXN3O00409 490 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-209ENST00000486618 PTGESO14684 152 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 N4BP3O15049 544 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 B4GALT5O43286 388 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 SLC37A4O43826 429 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 B3GAT3O94766 335 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 RHOBTB3O94955 611 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 PAPSS2O95340 614 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-209ENST00000486618 WISP1O95388 367 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 ZNF806P0C7X5 589 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 CHRNB1P11230 501 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 RAC2P15153 192 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 GLRA2P23416 452 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 CCNE1P24864 410 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 HOXA6P31267 233 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 CD68P34810 354 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-209ENST00000486618 COPAP53621 1224 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 CYP4A11Q02928 519 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 COX10Q12887 443 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 COL9A2Q14055 689 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-209ENST00000486618 CTTNQ14247 550 aaKnown RBP7.31□□□□□ -1.24
HDAC3-209ENST00000486618 ECM1Q16610 540 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 SLC5A9Q2M3M2 681 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 DGKKQ5KSL6 1271 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 HEATR6Q6AI08 1181 aaKnown RBP7.31□□□□□ -1.24
HDAC3-209ENST00000486618 NEK8Q86SG6 692 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 ZBTB8OSQ8IWT0 167 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 YAF2Q8IY57 180 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 LEMD2Q8NC56 503 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 CSGALNACT1Q8TDX6 532 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 ASAP3Q8TDY4 903 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 SMARCD2Q92925 531 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 LOXL4Q96JB6 756 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 ZNF512Q96ME7 567 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-209ENST00000486618 JAKMIP1Q96N16 626 aaKnown RBP7.31□□□□□ -1.24
HDAC3-209ENST00000486618 UROC1Q96N76 676 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 CORO1BQ9BR76 489 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 GPR88Q9GZN0 384 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 C8orf33Q9H7E9 229 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-209ENST00000486618 ANKEF1Q9NU02 776 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 PDRG1Q9NUG6 133 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 ZIM2Q9NZV7 527 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 TBK1Q9UHD2 729 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 PCDHGB7Q9Y5F8 929 aa7.31□□□□□ -1.24
HDAC3-209ENST00000486618 PDCD11Q14690 1871 aaKnown RBP7.3□□□□□ -1.24
HDAC3-209ENST00000486618 CFAP47Q6ZTR5 3102 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 SCO2A0A1W2PP80 73 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 WDR27A2RRH5 827 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 LRRIQ4A6NIV6 560 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 H7C4K7 107 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 K7ENM7 598 aa7.3□□□□□ -1.24
HDAC3-209ENST00000486618 CCNT1O60563 726 aaKnown RBP7.3□□□□□ -1.24
HDAC3-209ENST00000486618 TNFRSF21O75509 655 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms