RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 KATNAL2Q8IYT4 538 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 KLHL23Q8NBE8 558 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 SPATA4Q8NEY3 305 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 SPPL2BQ8TCT7 592 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 FAM172AQ8WUF8 416 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 C8orf48Q96LL4 319 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 PEBP4Q96S96 227 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 SEPT5Q99719 369 aaPredicted RBP15.1■□□□□ 0.01
COL9A1-207ENST00000486080 C11orf84Q9BUA3 381 aaPredicted RBP15.1■□□□□ 0.01
COL9A1-207ENST00000486080 NGRNQ9NPE2 291 aaKnown RBP15.1■□□□□ 0.01
COL9A1-207ENST00000486080 CALCOCO1Q9P1Z2 691 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 NAALADL1Q9UQQ1 740 aa15.1■□□□□ 0.01
COL9A1-207ENST00000486080 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.1■□□□□ 0.01
COL9A1-207ENST00000486080 CARNS1A5YM72 827 aa15.09■□□□□ 0.01
COL9A1-207ENST00000486080 GRXCR1A8MXD5 290 aa15.09■□□□□ 0.01
COL9A1-207ENST00000486080 PI4K2BG5E9Z4 385 aa15.09■□□□□ 0.01
COL9A1-207ENST00000486080 TRIM66O15016 1216 aa15.09■□□□□ 0.01
COL9A1-207ENST00000486080 MYOGP15173 224 aa15.09■□□□□ 0.01
COL9A1-207ENST00000486080 GTF2F1P35269 517 aaKnown RBP eCLIP15.09■□□□□ 0.01
COL9A1-207ENST00000486080 MATKP42679 507 aa15.09■□□□□ 0.01
COL9A1-207ENST00000486080 MAGEA10P43363 369 aaPredicted RBP15.09■□□□□ 0.01
COL9A1-207ENST00000486080 PTPN9P43378 593 aa15.09■□□□□ 0.01
COL9A1-207ENST00000486080 ATXN1P54253 815 aaKnown RBP15.09■□□□□ 0.01
COL9A1-207ENST00000486080 ACAP1Q15027 740 aa15.09■□□□□ 0.01
COL9A1-207ENST00000486080 SMTNL2Q2TAL5 461 aa15.09■□□□□ 0.01
COL9A1-207ENST00000486080 KCNT1Q5JUK3 1230 aa15.09■□□□□ 0.01
COL9A1-207ENST00000486080 LRRC38Q5VT99 294 aa15.09■□□□□ 0.01
COL9A1-207ENST00000486080 FAM109BQ6ICB4 259 aaPredicted RBP15.09■□□□□ 0.01
COL9A1-207ENST00000486080 RSRC2Q7L4I2 434 aaKnown RBP15.09■□□□□ 0.01
COL9A1-207ENST00000486080 SPRED2Q7Z698 418 aa15.09■□□□□ 0.01
COL9A1-207ENST00000486080 ANKS1BQ7Z6G8 1248 aa15.09■□□□□ 0.01
COL9A1-207ENST00000486080 ADAT2Q7Z6V5 191 aaKnown RBP15.09■□□□□ 0.01
COL9A1-207ENST00000486080 SLC2A13Q96QE2 648 aa15.09■□□□□ 0.01
COL9A1-207ENST00000486080 TBCBQ99426 244 aa15.09■□□□□ 0.01
COL9A1-207ENST00000486080 AP1M1Q9BXS5 423 aa15.09■□□□□ 0.01
COL9A1-207ENST00000486080 MTIF3Q9H2K0 278 aaKnown RBP15.09■□□□□ 0.01
COL9A1-207ENST00000486080 POPDC2Q9HBU9 364 aa15.09■□□□□ 0.01
COL9A1-207ENST00000486080 RBM12Q9NTZ6 932 aaKnown RBP15.09■□□□□ 0.01
COL9A1-207ENST00000486080 TTC7AQ9ULT0 858 aaPredicted RBP15.09■□□□□ 0.01
COL9A1-207ENST00000486080 USP18Q9UMW8 372 aa15.09■□□□□ 0.01
COL9A1-207ENST00000486080 EFCAB8A8MWE9 144 aa15.08■□□□□ 0.01
COL9A1-207ENST00000486080 TRUB2O95900 331 aaKnown RBP15.08■□□□□ 0.01
COL9A1-207ENST00000486080 LTFP02788 710 aa15.08■□□□□ 0.01
COL9A1-207ENST00000486080 URODP06132 367 aa15.08■□□□□ 0.01
COL9A1-207ENST00000486080 GLI1P08151 1106 aa15.08■□□□□ 0.01
COL9A1-207ENST00000486080 HAPLN1P10915 354 aaPredicted RBP15.08■□□□□ 0.01
COL9A1-207ENST00000486080 PCK1P35558 622 aa15.08■□□□□ 0.01
COL9A1-207ENST00000486080 PGFP49763 221 aa15.08■□□□□ 0.01
COL9A1-207ENST00000486080 TERF1P54274 439 aa15.08■□□□□ 0.01
COL9A1-207ENST00000486080 HDAC4P56524 1084 aa15.08■□□□□ 0.01
COL9A1-207ENST00000486080 USP46P62068 366 aa15.08■□□□□ 0.01
COL9A1-207ENST00000486080 KRT17Q04695 432 aa15.08■□□□□ 0.01
COL9A1-207ENST00000486080 SMARCB1Q12824 385 aa15.08■□□□□ 0.01
COL9A1-207ENST00000486080 ERCC6LQ2NKX8 1250 aa15.08■□□□□ 0.01
COL9A1-207ENST00000486080 MGAT5BQ3V5L5 792 aa15.08■□□□□ 0.01
COL9A1-207ENST00000486080 TEX35Q5T0J7 233 aa15.08■□□□□ 0.01
COL9A1-207ENST00000486080 OTUD1Q5VV17 481 aaPredicted RBP15.08■□□□□ 0.01
COL9A1-207ENST00000486080 RAPGEF5Q92565 580 aa15.08■□□□□ 0.01
COL9A1-207ENST00000486080 EDEM1Q92611 657 aa15.08■□□□□ 0.01
COL9A1-207ENST00000486080 CENPIQ92674 756 aaPredicted RBP15.08■□□□□ 0.01
COL9A1-207ENST00000486080 RNF25Q96BH1 459 aaPredicted RBP15.08■□□□□ 0.01
COL9A1-207ENST00000486080 HERPUD2Q9BSE4 406 aa15.08■□□□□ 0.01
COL9A1-207ENST00000486080 NR2E1Q9Y466 385 aa15.08■□□□□ 0.01
COL9A1-207ENST00000486080 PLXNA3P51805 1871 aa15.08■□□□□ 0
COL9A1-207ENST00000486080 TCRBV7S2A1N4TA0A589 114 aa15.08■□□□□ 0
COL9A1-207ENST00000486080 SART1O43290 800 aaKnown RBP15.08■□□□□ 0
COL9A1-207ENST00000486080 ARHGEF15O94989 841 aa15.08■□□□□ 0
COL9A1-207ENST00000486080 SEC24AO95486 1093 aa15.08■□□□□ 0
COL9A1-207ENST00000486080 NOS2P35228 1153 aa15.08■□□□□ 0
COL9A1-207ENST00000486080 HADHQ16836 314 aaKnown RBP15.08■□□□□ 0
COL9A1-207ENST00000486080 LONRF2Q1L5Z9 754 aa15.08■□□□□ 0
COL9A1-207ENST00000486080 ZFYVE27Q5T4F4 411 aa15.08■□□□□ 0
COL9A1-207ENST00000486080 SEL1L2Q5TEA6 688 aa15.08■□□□□ 0
COL9A1-207ENST00000486080 SCYL2Q6P3W7 929 aa15.08■□□□□ 0
COL9A1-207ENST00000486080 CYP4V2Q6ZWL3 525 aaPredicted RBP15.08■□□□□ 0
COL9A1-207ENST00000486080 NUP93Q8N1F7 819 aa15.08■□□□□ 0
COL9A1-207ENST00000486080 SCML4Q8N228 414 aa15.08■□□□□ 0
COL9A1-207ENST00000486080 C2orf15Q8WU43 125 aaKnown RBP15.08■□□□□ 0
COL9A1-207ENST00000486080 IRGQQ8WZA9 623 aa15.08■□□□□ 0
COL9A1-207ENST00000486080 GOLGA1Q92805 767 aa15.08■□□□□ 0
COL9A1-207ENST00000486080 ZBP1Q9H171 429 aa15.08■□□□□ 0
COL9A1-207ENST00000486080 EPC1Q9H2F5 836 aa15.08■□□□□ 0
COL9A1-207ENST00000486080 LINC01553A4QN01 128 aa15.07■□□□□ 0
COL9A1-207ENST00000486080 LILRB3O75022 631 aa15.07■□□□□ 0
COL9A1-207ENST00000486080 ABLIM3O94929 683 aa15.07■□□□□ 0
COL9A1-207ENST00000486080 ZRANB2O95218 330 aaKnown RBP eCLIP15.07■□□□□ 0
COL9A1-207ENST00000486080 KRT1P04264 644 aa15.07■□□□□ 0
COL9A1-207ENST00000486080 NCAM1P13591 858 aa15.07■□□□□ 0
COL9A1-207ENST00000486080 CTNNB1P35222 781 aa15.07■□□□□ 0
COL9A1-207ENST00000486080 BMPR1AP36894 532 aa15.07■□□□□ 0
COL9A1-207ENST00000486080 SULT1E1P49888 294 aa15.07■□□□□ 0
COL9A1-207ENST00000486080 MTMR3Q13615 1198 aa15.07■□□□□ 0
COL9A1-207ENST00000486080 SHHQ15465 462 aa15.07■□□□□ 0
COL9A1-207ENST00000486080 SLC25A52Q3SY17 297 aa15.07■□□□□ 0
COL9A1-207ENST00000486080 BSPRYQ5W0U4 402 aa15.07■□□□□ 0
COL9A1-207ENST00000486080 POLNQ7Z5Q5 900 aa15.07■□□□□ 0
COL9A1-207ENST00000486080 CCDC50Q8IVM0 306 aa15.07■□□□□ 0
COL9A1-207ENST00000486080 ZDHHC14Q8IZN3 488 aa15.07■□□□□ 0
COL9A1-207ENST00000486080 EXD1Q8NHP7 514 aa15.07■□□□□ 0
COL9A1-207ENST00000486080 ZNF461Q8TAF7 563 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms