RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 DDX42Q86XP3 938 aaKnown RBP eCLIP18.61■□□□□ 0.57
COL6A1-204ENST00000486023 SYNPOQ8N3V7 929 aa18.61■□□□□ 0.57
COL6A1-204ENST00000486023 TRIML1Q8N9V2 468 aa18.61■□□□□ 0.57
COL6A1-204ENST00000486023 UBA3Q8TBC4 463 aa18.61■□□□□ 0.57
COL6A1-204ENST00000486023 WBP2Q969T9 261 aa18.61■□□□□ 0.57
COL6A1-204ENST00000486023 FAXDC2Q96IV6 333 aa18.61■□□□□ 0.57
COL6A1-204ENST00000486023 IER2Q9BTL4 223 aa18.61■□□□□ 0.57
COL6A1-204ENST00000486023 NMUR1Q9HB89 426 aa18.61■□□□□ 0.57
COL6A1-204ENST00000486023 OSER1Q9NX31 292 aa18.61■□□□□ 0.57
COL6A1-204ENST00000486023 CALCAP01258 141 aa18.6■□□□□ 0.57
COL6A1-204ENST00000486023 AFPP02771 609 aaKnown RBP18.6■□□□□ 0.57
COL6A1-204ENST00000486023 CYP17A1P05093 508 aa18.6■□□□□ 0.57
COL6A1-204ENST00000486023 CCDC192P0DO97 292 aa18.6■□□□□ 0.57
COL6A1-204ENST00000486023 TBXAS1P24557 533 aaPredicted RBP18.6■□□□□ 0.57
COL6A1-204ENST00000486023 ATP5C1P36542 298 aaKnown RBP18.6■□□□□ 0.57
COL6A1-204ENST00000486023 SLC6A11P48066 632 aa18.6■□□□□ 0.57
COL6A1-204ENST00000486023 KIF11P52732 1056 aa18.6■□□□□ 0.57
COL6A1-204ENST00000486023 TPD52L1Q16890 204 aaPredicted RBP18.6■□□□□ 0.57
COL6A1-204ENST00000486023 PRR23BQ6ZRT6 265 aa18.6■□□□□ 0.57
COL6A1-204ENST00000486023 PIGZQ86VD9 579 aa18.6■□□□□ 0.57
COL6A1-204ENST00000486023 DCLK2Q8N568 766 aa18.6■□□□□ 0.57
COL6A1-204ENST00000486023 NAT16Q8N8M0 369 aa18.6■□□□□ 0.57
COL6A1-204ENST00000486023 KAT5Q92993 513 aa18.6■□□□□ 0.57
COL6A1-204ENST00000486023 ZFRQ96KR1 1074 aaKnown RBP18.6■□□□□ 0.57
COL6A1-204ENST00000486023 HESX1Q9UBX0 185 aa18.6■□□□□ 0.57
COL6A1-204ENST00000486023 TSPAN16Q9UKR8 245 aa18.6■□□□□ 0.57
COL6A1-204ENST00000486023 SLC8A2Q9UPR5 921 aa18.6■□□□□ 0.57
COL6A1-204ENST00000486023 PTPRDP23468 1912 aa18.6■□□□□ 0.57
COL6A1-204ENST00000486023 OBSL1O75147 1896 aa18.6■□□□□ 0.57
COL6A1-204ENST00000486023 E2F8A0AVK6 867 aa18.59■□□□□ 0.57
COL6A1-204ENST00000486023 ATG13O75143 517 aa18.59■□□□□ 0.57
COL6A1-204ENST00000486023 TUBP50607 506 aa18.59■□□□□ 0.57
COL6A1-204ENST00000486023 ANO4Q32M45 955 aa18.59■□□□□ 0.57
COL6A1-204ENST00000486023 LY6G5CQ5SRR4 150 aa18.59■□□□□ 0.57
COL6A1-204ENST00000486023 ARHGAP17Q68EM7 881 aa18.59■□□□□ 0.57
COL6A1-204ENST00000486023 RHBDF2Q6PJF5 856 aa18.59■□□□□ 0.57
COL6A1-204ENST00000486023 MIB1Q86YT6 1006 aa18.59■□□□□ 0.57
COL6A1-204ENST00000486023 TRIM59Q8IWR1 403 aa18.59■□□□□ 0.57
COL6A1-204ENST00000486023 BBS7Q8IWZ6 715 aa18.59■□□□□ 0.57
COL6A1-204ENST00000486023 ANKRD52Q8NB46 1076 aa18.59■□□□□ 0.57
COL6A1-204ENST00000486023 ZBTB44Q8NCP5 570 aa18.59■□□□□ 0.57
COL6A1-204ENST00000486023 EHBP1Q8NDI1 1231 aa18.59■□□□□ 0.57
COL6A1-204ENST00000486023 RPLP0P6Q8NHW5 317 aa18.59■□□□□ 0.57
COL6A1-204ENST00000486023 TBC1D14Q9P2M4 693 aa18.59■□□□□ 0.57
COL6A1-204ENST00000486023 RWDD2AQ9UIY3 292 aa18.59■□□□□ 0.57
COL6A1-204ENST00000486023 DENND4CQ5VZ89 1909 aa18.59■□□□□ 0.57
COL6A1-204ENST00000486023 TULP2O00295 520 aa18.58■□□□□ 0.56
COL6A1-204ENST00000486023 ADH1CP00326 375 aa18.58■□□□□ 0.56
COL6A1-204ENST00000486023 HMBSP08397 361 aa18.58■□□□□ 0.56
COL6A1-204ENST00000486023 RALAP11233 206 aa18.58■□□□□ 0.56
COL6A1-204ENST00000486023 VDRP11473 427 aa18.58■□□□□ 0.56
COL6A1-204ENST00000486023 TDGF1P13385 188 aa18.58■□□□□ 0.56
COL6A1-204ENST00000486023 TKTL1P51854 596 aa18.58■□□□□ 0.56
COL6A1-204ENST00000486023 PDE4CQ08493 712 aa18.58■□□□□ 0.56
COL6A1-204ENST00000486023 SRSF5Q13243 272 aaKnown RBP18.58■□□□□ 0.56
COL6A1-204ENST00000486023 C2orf27AQ580R0 203 aa18.58■□□□□ 0.56
COL6A1-204ENST00000486023 MAMSTRQ6ZN01 415 aa18.58■□□□□ 0.56
COL6A1-204ENST00000486023 SCD5Q86SK9 330 aa18.58■□□□□ 0.56
COL6A1-204ENST00000486023 TTC30AQ86WT1 665 aa18.58■□□□□ 0.56
COL6A1-204ENST00000486023 ARHGEF19Q8IW93 802 aa18.58■□□□□ 0.56
COL6A1-204ENST00000486023 NDRG1Q92597 394 aaKnown RBP18.58■□□□□ 0.56
COL6A1-204ENST00000486023 FAM126AQ9BYI3 521 aaPredicted RBP18.58■□□□□ 0.56
COL6A1-204ENST00000486023 CLSTN2Q9H4D0 955 aa18.58■□□□□ 0.56
COL6A1-204ENST00000486023 LRRC4Q9HBW1 653 aa18.58■□□□□ 0.56
COL6A1-204ENST00000486023 PNPLA8Q9NP80 782 aa18.58■□□□□ 0.56
COL6A1-204ENST00000486023 NCDNQ9UBB6 729 aa18.58■□□□□ 0.56
COL6A1-204ENST00000486023 RASAL2Q9UJF2 1139 aa18.58■□□□□ 0.56
COL6A1-204ENST00000486023 PTPRZ1P23471 2315 aaPredicted RBP18.58■□□□□ 0.56
COL6A1-204ENST00000486023 GREB1Q4ZG55 1949 aa18.58■□□□□ 0.56
COL6A1-204ENST00000486023 KIF26AQ9ULI4 1882 aaPredicted RBP18.57■□□□□ 0.56
COL6A1-204ENST00000486023 ANTXRLA6NF34 631 aa18.57■□□□□ 0.56
COL6A1-204ENST00000486023 K7ESF4 209 aa18.57■□□□□ 0.56
COL6A1-204ENST00000486023 PIK3R2O00459 728 aa18.57■□□□□ 0.56
COL6A1-204ENST00000486023 ADH5P11766 374 aa18.57■□□□□ 0.56
COL6A1-204ENST00000486023 KRT5P13647 590 aa18.57■□□□□ 0.56
COL6A1-204ENST00000486023 LCP1P13796 627 aa18.57■□□□□ 0.56
COL6A1-204ENST00000486023 OPRD1P41143 372 aa18.57■□□□□ 0.56
COL6A1-204ENST00000486023 KDSRQ06136 332 aa18.57■□□□□ 0.56
COL6A1-204ENST00000486023 GOLGA8FQ08AF8 430 aa18.57■□□□□ 0.56
COL6A1-204ENST00000486023 GOLGA8DPQ0D2H9 430 aa18.57■□□□□ 0.56
COL6A1-204ENST00000486023 EFEMP1Q12805 493 aa18.57■□□□□ 0.56
COL6A1-204ENST00000486023 BTBD8Q5XKL5 378 aa18.57■□□□□ 0.56
COL6A1-204ENST00000486023 RSRC2Q7L4I2 434 aaKnown RBP18.57■□□□□ 0.56
COL6A1-204ENST00000486023 KIAA2013Q8IYS2 634 aa18.57■□□□□ 0.56
COL6A1-204ENST00000486023 EZH1Q92800 747 aaPredicted RBP18.57■□□□□ 0.56
COL6A1-204ENST00000486023 CRACR2AQ9BSW2 395 aa18.57■□□□□ 0.56
COL6A1-204ENST00000486023 KLF16Q9BXK1 252 aaPredicted RBP18.57■□□□□ 0.56
COL6A1-204ENST00000486023 INTS2Q9H0H0 1204 aaKnown RBP18.57■□□□□ 0.56
COL6A1-204ENST00000486023 NUP62CLQ9H1M0 184 aa18.57■□□□□ 0.56
COL6A1-204ENST00000486023 CYLDQ9NQC7 956 aa18.57■□□□□ 0.56
COL6A1-204ENST00000486023 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.57■□□□□ 0.56
COL6A1-204ENST00000486023 DNMT3LQ9UJW3 386 aa18.57■□□□□ 0.56
COL6A1-204ENST00000486023 LSM7Q9UK45 103 aaKnown RBP18.57■□□□□ 0.56
COL6A1-204ENST00000486023 RIF1Q5UIP0 2472 aaKnown RBP18.57■□□□□ 0.56
COL6A1-204ENST00000486023 ANAPC1Q9H1A4 1944 aa18.57■□□□□ 0.56
COL6A1-204ENST00000486023 RNF225M0QZC1 329 aaPredicted RBP18.56■□□□□ 0.56
COL6A1-204ENST00000486023 P4HA2O15460 535 aa18.56■□□□□ 0.56
COL6A1-204ENST00000486023 RGS7P49802 495 aa18.56■□□□□ 0.56
COL6A1-204ENST00000486023 GAD2Q05329 585 aa18.56■□□□□ 0.56
COL6A1-204ENST00000486023 FBXO43Q4G163 708 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms