RNA–Protein interactions for RNA: ENST00000485758.1

TPRKB-208, Transcript of TP53RK binding protein, human

TSL 2

Gene TPRKB, Length 730 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPRKB-208	ENST00000485758	HESX1	Q9UBX0	185 aa		11.11	□□□□□ -0.63
TPRKB-208	ENST00000485758	LIMA1	Q9UHB6	759 aa	Known RBP	11.11	□□□□□ -0.63
TPRKB-208	ENST00000485758	AJAP1	Q9UKB5	411 aa	Predicted RBP	11.11	□□□□□ -0.63
TPRKB-208	ENST00000485758	CA14	Q9ULX7	337 aa		11.11	□□□□□ -0.63
TPRKB-208	ENST00000485758	SCML2	Q9UQR0	700 aa		11.11	□□□□□ -0.63
TPRKB-208	ENST00000485758	CCL26	Q9Y258	94 aa		11.11	□□□□□ -0.63
TPRKB-208	ENST00000485758	ZNF318	Q5VUA4	2279 aa		11.11	□□□□□ -0.63
TPRKB-208	ENST00000485758	KRBA1	A5PL33	1030 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	SMTNL1	A8MU46	457 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	BECN2	A8MW95	431 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	ZNF263	O14978	683 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	XPO1	O14980	1071 aa	Known RBP	11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	CHAD	O15335	359 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	RNF40	O75150	1001 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	OLFM2	O95897	454 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	ABL1	P00519	1130 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	PDGFB	P01127	241 aa	Predicted RBP	11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	CALCA	P01258	141 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	ZDHHC11B	P0C7U3	371 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	SETSIP	P0DME0	302 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	TCF3	P15923	654 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	HDC	P19113	662 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	GDI1	P31150	447 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	KIF11	P52732	1056 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	COPB1	P53618	953 aa	Known RBP	11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	PDE4C	Q08493	712 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	USP4	Q13107	963 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	CNGA2	Q16280	664 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	PKDCC	Q504Y2	493 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	ARHGAP29	Q52LW3	1261 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	RAB41	Q5JT25	222 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	CCDC186	Q7Z3E2	898 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	PIGZ	Q86VD9	579 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	DHX40	Q8IX18	779 aa	Known RBP	11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	SIX5	Q8N196	739 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	RIN3	Q8TB24	985 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	IRF7	Q92985	503 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	PBXIP1	Q96AQ6	731 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	LRRC3B	Q96PB8	259 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	CYP2S1	Q96SQ9	504 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	ZSWIM1	Q9BR11	485 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	LSM14B	Q9BX40	385 aa	Known RBP	11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	BRD9	Q9H8M2	597 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	TRPV5	Q9NQA5	729 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	ARHGEF3	Q9NR81	526 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	DNAJC12	Q9UKB3	198 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	ARHGAP26	Q9UNA1	814 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	USP3	Q9Y6I4	520 aa		11.1	□□□□□ -0.63
TPRKB-208	ENST00000485758	LGALS16	A8MUM7	142 aa		11.09	□□□□□ -0.63
TPRKB-208	ENST00000485758	TULP2	O00295	520 aa		11.09	□□□□□ -0.63
TPRKB-208	ENST00000485758	ARNTL	O00327	626 aa		11.09	□□□□□ -0.63
TPRKB-208	ENST00000485758	CYP26A1	O43174	497 aa		11.09	□□□□□ -0.63
TPRKB-208	ENST00000485758	CDK11B	P21127	795 aa	Known RBP	11.09	□□□□□ -0.63
TPRKB-208	ENST00000485758	RFX1	P22670	979 aa		11.09	□□□□□ -0.63
TPRKB-208	ENST00000485758	GNA15	P30679	374 aa		11.09	□□□□□ -0.63
TPRKB-208	ENST00000485758	PLA2G4A	P47712	749 aa		11.09	□□□□□ -0.63
TPRKB-208	ENST00000485758	ZNF165	P49910	485 aa		11.09	□□□□□ -0.63
TPRKB-208	ENST00000485758	TUB	P50607	506 aa		11.09	□□□□□ -0.63
TPRKB-208	ENST00000485758	COPS2	P61201	443 aa		11.09	□□□□□ -0.63
TPRKB-208	ENST00000485758	SLC7A9	P82251	487 aa		11.09	□□□□□ -0.63
TPRKB-208	ENST00000485758	PLCB2	Q00722	1185 aa		11.09	□□□□□ -0.63
TPRKB-208	ENST00000485758	MLF2	Q15773	248 aa	Predicted RBP	11.09	□□□□□ -0.63
TPRKB-208	ENST00000485758	ZNF77	Q15935	545 aa		11.09	□□□□□ -0.63
TPRKB-208	ENST00000485758	ZSCAN23	Q3MJ62	389 aa		11.09	□□□□□ -0.63
TPRKB-208	ENST00000485758	FKBP15	Q5T1M5	1219 aa		11.09	□□□□□ -0.63
TPRKB-208	ENST00000485758	HECTD3	Q5T447	861 aa		11.09	□□□□□ -0.63
TPRKB-208	ENST00000485758	KLHDC7A	Q5VTJ3	777 aa		11.09	□□□□□ -0.63
TPRKB-208	ENST00000485758	APTX	Q7Z2E3	356 aa	Known RBP	11.09	□□□□□ -0.63
TPRKB-208	ENST00000485758	FBXL6	Q8N531	539 aa		11.09	□□□□□ -0.63
TPRKB-208	ENST00000485758	UBA3	Q8TBC4	463 aa		11.09	□□□□□ -0.63
TPRKB-208	ENST00000485758	RNF38	Q9H0F5	515 aa		11.09	□□□□□ -0.63
TPRKB-208	ENST00000485758	MFSD1	Q9H3U5	465 aa		11.09	□□□□□ -0.63
TPRKB-208	ENST00000485758	PLCB1	Q9NQ66	1216 aa		11.09	□□□□□ -0.63
TPRKB-208	ENST00000485758	TLR8	Q9NR97	1041 aa	Known RBP	11.09	□□□□□ -0.63
TPRKB-208	ENST00000485758	CHORDC1	Q9UHD1	332 aa	Predicted RBP	11.09	□□□□□ -0.63
TPRKB-208	ENST00000485758	ZDBF2	Q9HCK1	2354 aa		11.08	□□□□□ -0.64
TPRKB-208	ENST00000485758	LRRC10B	A6NIK2	292 aa		11.08	□□□□□ -0.64
TPRKB-208	ENST00000485758		M0QYV0	167 aa		11.08	□□□□□ -0.64
TPRKB-208	ENST00000485758	COCH	O43405	550 aa		11.08	□□□□□ -0.64
TPRKB-208	ENST00000485758	THAP12	O43422	761 aa		11.08	□□□□□ -0.64
TPRKB-208	ENST00000485758	MED7	O43513	233 aa		11.08	□□□□□ -0.64
TPRKB-208	ENST00000485758	TLR5	O60602	858 aa		11.08	□□□□□ -0.64
TPRKB-208	ENST00000485758	ATP1A3	P13637	1013 aa		11.08	□□□□□ -0.64
TPRKB-208	ENST00000485758	USP8	P40818	1118 aa		11.08	□□□□□ -0.64
TPRKB-208	ENST00000485758	PGF	P49763	221 aa		11.08	□□□□□ -0.64
TPRKB-208	ENST00000485758	PRKCQ	Q04759	706 aa		11.08	□□□□□ -0.64
TPRKB-208	ENST00000485758	MTF1	Q14872	753 aa		11.08	□□□□□ -0.64
TPRKB-208	ENST00000485758	IQCB1	Q15051	598 aa		11.08	□□□□□ -0.64
TPRKB-208	ENST00000485758	MEA1	Q16626	185 aa		11.08	□□□□□ -0.64
TPRKB-208	ENST00000485758	SLC44A4	Q53GD3	710 aa		11.08	□□□□□ -0.64
TPRKB-208	ENST00000485758	CWF19L1	Q69YN2	538 aa	Known RBP	11.08	□□□□□ -0.64
TPRKB-208	ENST00000485758	SUGP1	Q8IWZ8	645 aa	Known RBP	11.08	□□□□□ -0.64
TPRKB-208	ENST00000485758	SH3RF2	Q8TEC5	729 aa		11.08	□□□□□ -0.64
TPRKB-208	ENST00000485758	SLC35F5	Q8WV83	523 aa		11.08	□□□□□ -0.64
TPRKB-208	ENST00000485758	KCTD13	Q8WZ19	329 aa		11.08	□□□□□ -0.64
TPRKB-208	ENST00000485758	SECISBP2L	Q93073	1101 aa	Known RBP	11.08	□□□□□ -0.64
TPRKB-208	ENST00000485758	ZFYVE19	Q96K21	471 aa		11.08	□□□□□ -0.64
TPRKB-208	ENST00000485758	NAA15	Q9BXJ9	866 aa	Known RBP	11.08	□□□□□ -0.64
TPRKB-208	ENST00000485758	GAN	Q9H2C0	597 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms