RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 NCAM2O15394 837 aa20.14■□□□□ 0.81
SNX17-206ENST00000484886 LETM1O95202 739 aaPredicted RBP20.14■□□□□ 0.81
SNX17-206ENST00000484886 IRF1P10914 325 aa20.14■□□□□ 0.81
SNX17-206ENST00000484886 RALAP11233 206 aa20.14■□□□□ 0.81
SNX17-206ENST00000484886 CDK11BP21127 795 aaKnown RBP20.14■□□□□ 0.81
SNX17-206ENST00000484886 TARSP26639 723 aaKnown RBP20.14■□□□□ 0.81
SNX17-206ENST00000484886 RUNX3Q13761 415 aa20.14■□□□□ 0.81
SNX17-206ENST00000484886 KRT31Q15323 416 aa20.14■□□□□ 0.81
SNX17-206ENST00000484886 CNGA2Q16280 664 aa20.14■□□□□ 0.81
SNX17-206ENST00000484886 C10orf120Q5SQS8 335 aa20.14■□□□□ 0.81
SNX17-206ENST00000484886 CCDC105Q8IYK2 499 aa20.14■□□□□ 0.81
SNX17-206ENST00000484886 SIX6OS1Q8N1H7 587 aa20.14■□□□□ 0.81
SNX17-206ENST00000484886 CPA6Q8N4T0 437 aa20.14■□□□□ 0.81
SNX17-206ENST00000484886 AOPEPQ8N6M6 819 aa20.14■□□□□ 0.81
SNX17-206ENST00000484886 DTWD2Q8NBA8 298 aa20.14■□□□□ 0.81
SNX17-206ENST00000484886 SECISBP2LQ93073 1101 aaKnown RBP20.14■□□□□ 0.81
SNX17-206ENST00000484886 MSANTD3Q96H12 275 aa20.14■□□□□ 0.81
SNX17-206ENST00000484886 LSM14BQ9BX40 385 aaKnown RBP20.14■□□□□ 0.81
SNX17-206ENST00000484886 HPS4Q9NQG7 708 aa20.14■□□□□ 0.81
SNX17-206ENST00000484886 DNAJC12Q9UKB3 198 aa20.14■□□□□ 0.81
SNX17-206ENST00000484886 THAP12O43422 761 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 MED7O43513 233 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 GALR2O43603 387 aaPredicted RBP20.13■□□□□ 0.81
SNX17-206ENST00000484886 RARGP13631 454 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 LCP1P13796 627 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 TCF3P15923 654 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 GNA15P30679 374 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 CTHP32929 405 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 ATP5C1P36542 298 aaKnown RBP20.13■□□□□ 0.81
SNX17-206ENST00000484886 PSEN1P49768 467 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 RGS7P49802 495 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 NUBP1P53384 320 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 ZXDBP98169 803 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 ADIGQ0VDE8 80 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 KLHL40Q2TBA0 621 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 FKBP15Q5T1M5 1219 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 C1orf228Q6PIY5 440 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 TADA2BQ86TJ2 420 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 RALGPS2Q86X27 583 aaPredicted RBP20.13■□□□□ 0.81
SNX17-206ENST00000484886 ARHGAP18Q8N392 663 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 PRSS33Q8NF86 280 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 ZSWIM1Q9BR11 485 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 OSBPL6Q9BZF3 934 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 ULBP1Q9BZM6 244 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 NMUR1Q9HB89 426 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 SIX2Q9NPC8 291 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 OSER1Q9NX31 292 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 NUDT5Q9UKK9 219 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 CNTN6Q9UQ52 1028 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 SH3BP1Q9Y3L3 701 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 USP3Q9Y6I4 520 aa20.13■□□□□ 0.81
SNX17-206ENST00000484886 TBX18O95935 607 aa20.12■□□□□ 0.81
SNX17-206ENST00000484886 ZBED1O96006 694 aa20.12■□□□□ 0.81
SNX17-206ENST00000484886 PLA2G4AP47712 749 aa20.12■□□□□ 0.81
SNX17-206ENST00000484886 MLLT6P55198 1093 aaPredicted RBP20.12■□□□□ 0.81
SNX17-206ENST00000484886 GOLGA8FQ08AF8 430 aa20.12■□□□□ 0.81
SNX17-206ENST00000484886 GOLGA8DPQ0D2H9 430 aa20.12■□□□□ 0.81
SNX17-206ENST00000484886 RAPGEF1Q13905 1077 aa20.12■□□□□ 0.81
SNX17-206ENST00000484886 RAB41Q5JT25 222 aa20.12■□□□□ 0.81
SNX17-206ENST00000484886 RSRC2Q7L4I2 434 aaKnown RBP20.12■□□□□ 0.81
SNX17-206ENST00000484886 LINC00597Q9H2U6 94 aa20.12■□□□□ 0.81
SNX17-206ENST00000484886 CYLDQ9NQC7 956 aa20.12■□□□□ 0.81
SNX17-206ENST00000484886 PIK3R2O00459 728 aa20.11■□□□□ 0.81
SNX17-206ENST00000484886 SLC9A3R1O14745 358 aaPredicted RBP20.11■□□□□ 0.81
SNX17-206ENST00000484886 NFATC1O95644 943 aa20.11■□□□□ 0.81
SNX17-206ENST00000484886 PTPN5P54829 565 aa20.11■□□□□ 0.81
SNX17-206ENST00000484886 AMPD2Q01433 879 aa20.11■□□□□ 0.81
SNX17-206ENST00000484886 NR1H3Q13133 447 aa20.11■□□□□ 0.81
SNX17-206ENST00000484886 PON2Q15165 354 aa20.11■□□□□ 0.81
SNX17-206ENST00000484886 EML3Q32P44 896 aa20.11■□□□□ 0.81
SNX17-206ENST00000484886 SCD5Q86SK9 330 aa20.11■□□□□ 0.81
SNX17-206ENST00000484886 SHC3Q92529 594 aa20.11■□□□□ 0.81
SNX17-206ENST00000484886 CDK5RAP1Q96SZ6 601 aaKnown RBP20.11■□□□□ 0.81
SNX17-206ENST00000484886 ECT2Q9H8V3 914 aa20.11■□□□□ 0.81
SNX17-206ENST00000484886 ACP6Q9NPH0 428 aa20.11■□□□□ 0.81
SNX17-206ENST00000484886 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.11■□□□□ 0.81
SNX17-206ENST00000484886 DNMT3LQ9UJW3 386 aa20.11■□□□□ 0.81
SNX17-206ENST00000484886 AJAP1Q9UKB5 411 aaPredicted RBP20.11■□□□□ 0.81
SNX17-206ENST00000484886 SYCE3A1L190 88 aa20.1■□□□□ 0.81
SNX17-206ENST00000484886 OTOL1A6NHN0 477 aaPredicted RBP20.1■□□□□ 0.81
SNX17-206ENST00000484886 SHISA7A6NL88 538 aa20.1■□□□□ 0.81
SNX17-206ENST00000484886 MDM4O15151 490 aa20.1■□□□□ 0.81
SNX17-206ENST00000484886 COPB1P53618 953 aaKnown RBP20.1■□□□□ 0.81
SNX17-206ENST00000484886 YWHAGP61981 247 aaKnown RBP eCLIP20.1■□□□□ 0.81
SNX17-206ENST00000484886 PKDCCQ504Y2 493 aa20.1■□□□□ 0.81
SNX17-206ENST00000484886 PMF1Q6P1K2 205 aa20.1■□□□□ 0.81
SNX17-206ENST00000484886 TXNDC11Q6PKC3 985 aa20.1■□□□□ 0.81
SNX17-206ENST00000484886 MIB1Q86YT6 1006 aa20.1■□□□□ 0.81
SNX17-206ENST00000484886 KCTD13Q8WZ19 329 aa20.1■□□□□ 0.81
SNX17-206ENST00000484886 NDRG1Q92597 394 aaKnown RBP20.1■□□□□ 0.81
SNX17-206ENST00000484886 ZFRQ96KR1 1074 aaKnown RBP20.1■□□□□ 0.81
SNX17-206ENST00000484886 PCMTD1Q96MG8 357 aaPredicted RBP20.1■□□□□ 0.81
SNX17-206ENST00000484886 ST7Q9NRC1 585 aa20.1■□□□□ 0.81
SNX17-206ENST00000484886 SPATA6Q9NWH7 488 aaPredicted RBP20.1■□□□□ 0.81
SNX17-206ENST00000484886 CLIC5Q9NZA1 410 aa20.1■□□□□ 0.81
SNX17-206ENST00000484886 RASAL2Q9UJF2 1139 aa20.1■□□□□ 0.81
SNX17-206ENST00000484886 FHOD1Q9Y613 1164 aa20.1■□□□□ 0.81
SNX17-206ENST00000484886 F5P12259 2224 aa20.1■□□□□ 0.81
SNX17-206ENST00000484886 E2F8A0AVK6 867 aa20.09■□□□□ 0.81
SNX17-206ENST00000484886 BECN2A8MW95 431 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms