RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 COLGALT2Q8IYK4 626 aa17.46■□□□□ 0.39
CTSA-207ENST00000484855 IQCKQ8N0W5 287 aa17.46■□□□□ 0.39
CTSA-207ENST00000484855 GOLGA6L1Q8N7Z2 621 aa17.46■□□□□ 0.39
CTSA-207ENST00000484855 CCDC89Q8N998 374 aa17.46■□□□□ 0.39
CTSA-207ENST00000484855 UBLCP1Q8WVY7 318 aaPredicted RBP17.46■□□□□ 0.39
CTSA-207ENST00000484855 PIK3R5Q8WYR1 880 aa17.46■□□□□ 0.39
CTSA-207ENST00000484855 CENPIQ92674 756 aaPredicted RBP17.46■□□□□ 0.39
CTSA-207ENST00000484855 SNRNP25Q9BV90 132 aaKnown RBP17.46■□□□□ 0.39
CTSA-207ENST00000484855 FRMD8P1Q9BZ68 369 aaPredicted RBP17.46■□□□□ 0.39
CTSA-207ENST00000484855 ELAC1Q9H777 363 aaKnown RBP17.46■□□□□ 0.39
CTSA-207ENST00000484855 GPATCH2LQ9NWQ4 482 aa17.46■□□□□ 0.39
CTSA-207ENST00000484855 PCDHB8Q9UN66 801 aa17.46■□□□□ 0.39
CTSA-207ENST00000484855 ENPP3O14638 875 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 MDM4O15151 490 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 PPFIA2O75334 1257 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 ENDOD1O94919 500 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 FBXO21O94952 628 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 VPS41P49754 854 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 NDUFV1P49821 464 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 OTUD4Q01804 1114 aaKnown RBP17.45■□□□□ 0.38
CTSA-207ENST00000484855 PDK2Q15119 407 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 OASLQ15646 514 aaKnown RBP17.45■□□□□ 0.38
CTSA-207ENST00000484855 UAP1Q16222 522 aaPredicted RBP17.45■□□□□ 0.38
CTSA-207ENST00000484855 ABI1Q8IZP0 508 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 DEFB106AQ8N104 65 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 ZMIZ2Q8NF64 920 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 OR10T2Q8NGX3 314 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 ACTL9Q8TC94 416 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 NKD2Q969F2 451 aaPredicted RBP17.45■□□□□ 0.38
CTSA-207ENST00000484855 KCNK16Q96T55 309 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 MAK16Q9BXY0 300 aaKnown RBP17.45■□□□□ 0.38
CTSA-207ENST00000484855 ADAM33Q9BZ11 813 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 TMEM30AQ9NV96 361 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 DRG1Q9Y295 367 aaKnown RBP17.45■□□□□ 0.38
CTSA-207ENST00000484855 FAN1Q9Y2M0 1017 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 ATP8A1Q9Y2Q0 1164 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 TMEM189-UBE2V1I3L0A0 370 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 OPA1O60313 960 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 RNF40O75150 1001 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 KRT14P02533 472 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 ADCY8P40145 1251 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 SULT1E1P49888 294 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 ATN1P54259 1190 aaPredicted RBP17.45■□□□□ 0.38
CTSA-207ENST00000484855 YWHAZP63104 245 aaKnown RBP17.45■□□□□ 0.38
CTSA-207ENST00000484855 TSPY1Q01534 308 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 MMRN1Q13201 1228 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 ZC3H12AQ5D1E8 599 aaKnown RBP17.45■□□□□ 0.38
CTSA-207ENST00000484855 ALLCQ8N6M5 410 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 APBB2Q92870 758 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 RHOBTB2Q9BYZ6 727 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 ULBP1Q9BZM6 244 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 SAE1Q9UBE0 346 aaPredicted RBP17.45■□□□□ 0.38
CTSA-207ENST00000484855 PLAAQ9Y263 795 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 PCDHB7Q9Y5E2 793 aa17.45■□□□□ 0.38
CTSA-207ENST00000484855 TTC3P53804 2025 aa17.44■□□□□ 0.38
CTSA-207ENST00000484855 VWA8A3KMH1 1905 aa17.44■□□□□ 0.38
CTSA-207ENST00000484855 APOC4-APOC2K7ER74 178 aa17.44■□□□□ 0.38
CTSA-207ENST00000484855 APOC2P02655 101 aa17.44■□□□□ 0.38
CTSA-207ENST00000484855 ITGAVP06756 1048 aa17.44■□□□□ 0.38
CTSA-207ENST00000484855 ITIH2P19823 946 aa17.44■□□□□ 0.38
CTSA-207ENST00000484855 ATXN1P54253 815 aaKnown RBP17.44■□□□□ 0.38
CTSA-207ENST00000484855 YWHAHQ04917 246 aaPredicted RBP17.44■□□□□ 0.38
CTSA-207ENST00000484855 MAPRE1Q15691 268 aaKnown RBP17.44■□□□□ 0.38
CTSA-207ENST00000484855 ERMARDQ5T6L9 678 aa17.44■□□□□ 0.38
CTSA-207ENST00000484855 STRADAQ7RTN6 431 aa17.44■□□□□ 0.38
CTSA-207ENST00000484855 GPRIN1Q7Z2K8 1008 aa17.44■□□□□ 0.38
CTSA-207ENST00000484855 SLC35B2Q8TB61 432 aa17.44■□□□□ 0.38
CTSA-207ENST00000484855 CCHCR1Q8TD31 782 aa17.44■□□□□ 0.38
CTSA-207ENST00000484855 TMEM209Q96SK2 561 aa17.44■□□□□ 0.38
CTSA-207ENST00000484855 PKMYT1Q99640 499 aa17.44■□□□□ 0.38
CTSA-207ENST00000484855 SH3GL2Q99962 352 aa17.44■□□□□ 0.38
CTSA-207ENST00000484855 TXLNGYQ9BZA5 131 aa17.44■□□□□ 0.38
CTSA-207ENST00000484855 TMLHEQ9NVH6 421 aa17.44■□□□□ 0.38
CTSA-207ENST00000484855 VPS18Q9P253 973 aa17.44■□□□□ 0.38
CTSA-207ENST00000484855 DNAJB4Q9UDY4 337 aa17.44■□□□□ 0.38
CTSA-207ENST00000484855 PRG3Q9Y2Y8 225 aaPredicted RBP17.44■□□□□ 0.38
CTSA-207ENST00000484855 MICAL3Q7RTP6 2002 aa17.44■□□□□ 0.38
CTSA-207ENST00000484855 BDNFP23560 247 aa17.43■□□□□ 0.38
CTSA-207ENST00000484855 IVDP26440 423 aa17.43■□□□□ 0.38
CTSA-207ENST00000484855 KLRC2P26717 231 aa17.43■□□□□ 0.38
CTSA-207ENST00000484855 DAOAP59103 153 aa17.43■□□□□ 0.38
CTSA-207ENST00000484855 TFDP2Q14188 446 aa17.43■□□□□ 0.38
CTSA-207ENST00000484855 SLC25A52Q3SY17 297 aa17.43■□□□□ 0.38
CTSA-207ENST00000484855 DCAF6Q58WW2 860 aa17.43■□□□□ 0.38
CTSA-207ENST00000484855 RAB41Q5JT25 222 aa17.43■□□□□ 0.38
CTSA-207ENST00000484855 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.43■□□□□ 0.38
CTSA-207ENST00000484855 PCDH18Q9HCL0 1135 aa17.43■□□□□ 0.38
CTSA-207ENST00000484855 CSNK1G1Q9HCP0 422 aa17.43■□□□□ 0.38
CTSA-207ENST00000484855 CNGB3Q9NQW8 809 aa17.43■□□□□ 0.38
CTSA-207ENST00000484855 LRFN2Q9ULH4 789 aa17.43■□□□□ 0.38
CTSA-207ENST00000484855 FNDC1Q4ZHG4 1894 aaPredicted RBP17.43■□□□□ 0.38
CTSA-207ENST00000484855 NOS2P35228 1153 aa17.43■□□□□ 0.38
CTSA-207ENST00000484855 ITGA8P53708 1063 aa17.43■□□□□ 0.38
CTSA-207ENST00000484855 CA9Q16790 459 aa17.43■□□□□ 0.38
CTSA-207ENST00000484855 SPDYCQ5MJ68 293 aa17.43■□□□□ 0.38
CTSA-207ENST00000484855 BBOF1Q8ND07 529 aa17.43■□□□□ 0.38
CTSA-207ENST00000484855 SCLYQ96I15 445 aa17.43■□□□□ 0.38
CTSA-207ENST00000484855 SLC2A13Q96QE2 648 aa17.43■□□□□ 0.38
CTSA-207ENST00000484855 TMEM121Q9BTD3 319 aa17.43■□□□□ 0.38
CTSA-207ENST00000484855 HIPK3Q9H422 1215 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms