RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 TCP1P17987 556 aaKnown RBP21.42■■□□□ 1.02
VCPKMT-203ENST00000484763 ELF1P32519 619 aa21.42■■□□□ 1.02
VCPKMT-203ENST00000484763 CTNNA1P35221 906 aaKnown RBP21.42■■□□□ 1.02
VCPKMT-203ENST00000484763 PTPN9P43378 593 aa21.42■■□□□ 1.02
VCPKMT-203ENST00000484763 TDHQ8IZJ6 230 aa21.42■■□□□ 1.02
VCPKMT-203ENST00000484763 UBL4BQ8N7F7 174 aa21.42■■□□□ 1.02
VCPKMT-203ENST00000484763 CFAP57Q96MR6 1250 aa21.42■■□□□ 1.02
VCPKMT-203ENST00000484763 KLHL5Q96PQ7 755 aa21.42■■□□□ 1.02
VCPKMT-203ENST00000484763 SLC2A13Q96QE2 648 aa21.42■■□□□ 1.02
VCPKMT-203ENST00000484763 TRIM62Q9BVG3 475 aa21.42■■□□□ 1.02
VCPKMT-203ENST00000484763 NKX2-4Q9H2Z4 354 aa21.42■■□□□ 1.02
VCPKMT-203ENST00000484763 COMMD8Q9NX08 183 aa21.42■■□□□ 1.02
VCPKMT-203ENST00000484763 ZNF638Q14966 1978 aaKnown RBP21.42■■□□□ 1.02
VCPKMT-203ENST00000484763 COL4A4P53420 1690 aaPredicted RBP21.42■■□□□ 1.02
VCPKMT-203ENST00000484763 CCDC66A2RUB6 948 aa21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 C2orf71A6NGG8 1288 aa21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 H3BNC9 293 aa21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 FSCN2O14926 492 aa21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 RNF8O76064 485 aa21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 CSPG5O95196 566 aa21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 CTNNA2P26232 953 aa21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 MATKP42679 507 aa21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 CCDC14Q49A88 953 aa21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 DAB2IPQ5VWQ8 1189 aa21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 PPP2R2DQ66LE6 453 aa21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 HFE2Q6ZVN8 426 aa21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 TCEAL8Q8IYN2 117 aa21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 DEFB106AQ8N104 65 aa21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 MRPL43Q8N983 215 aaKnown RBP21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 STKLD1Q8NE28 680 aa21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 GPR152Q8TDT2 470 aa21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 OSBPL9Q96SU4 736 aa21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 DDX23Q9BUQ8 820 aaKnown RBP21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 IL37Q9NZH6 218 aa21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 SCML2Q9UQR0 700 aa21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 YIPF1Q9Y548 306 aa21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 HIDE1A8MVS5 230 aa21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 PRRG1O14668 218 aa21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 DDX3YO15523 660 aaKnown RBP21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 GPM6BQ13491 265 aa21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 TUBB2AQ13885 445 aa21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 CC2D1AQ6P1N0 951 aaPredicted RBP21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 PSMB7Q99436 277 aa21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 TUBB2BQ9BVA1 445 aa21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 STAP1Q9ULZ2 295 aa21.41■■□□□ 1.02
VCPKMT-203ENST00000484763 CHD9Q3L8U1 2897 aa21.4■■□□□ 1.02
VCPKMT-203ENST00000484763 TNRC18O15417 2968 aaPredicted RBP21.4■■□□□ 1.02
VCPKMT-203ENST00000484763 FAM92AA1XBS5 289 aa21.4■■□□□ 1.02
VCPKMT-203ENST00000484763 KCNK3O14649 394 aa21.4■■□□□ 1.02
VCPKMT-203ENST00000484763 CAPN9O14815 690 aa21.4■■□□□ 1.02
VCPKMT-203ENST00000484763 TGM5O43548 720 aa21.4■■□□□ 1.02
VCPKMT-203ENST00000484763 PSTPIP1O43586 416 aa21.4■■□□□ 1.02
VCPKMT-203ENST00000484763 LRCH4O75427 683 aa21.4■■□□□ 1.02
VCPKMT-203ENST00000484763 YWHAQP27348 245 aa21.4■■□□□ 1.02
VCPKMT-203ENST00000484763 NOS2P35228 1153 aa21.4■■□□□ 1.02
VCPKMT-203ENST00000484763 SSR1P43307 286 aaKnown RBP21.4■■□□□ 1.02
VCPKMT-203ENST00000484763 ALDH1A3P47895 512 aa21.4■■□□□ 1.02
VCPKMT-203ENST00000484763 USP46P62068 366 aa21.4■■□□□ 1.02
VCPKMT-203ENST00000484763 C15orf59Q2T9L4 293 aaPredicted RBP21.4■■□□□ 1.02
VCPKMT-203ENST00000484763 DCAF6Q58WW2 860 aa21.4■■□□□ 1.02
VCPKMT-203ENST00000484763 RHOT1Q8IXI2 618 aa21.4■■□□□ 1.02
VCPKMT-203ENST00000484763 MICAL1Q8TDZ2 1067 aa21.4■■□□□ 1.02
VCPKMT-203ENST00000484763 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.4■■□□□ 1.02
VCPKMT-203ENST00000484763 PCDHA3Q9Y5H8 950 aa21.4■■□□□ 1.02
VCPKMT-203ENST00000484763 MRFAP1Q9Y605 127 aa21.4■■□□□ 1.02
VCPKMT-203ENST00000484763 SLC38A8A6NNN8 435 aa21.39■■□□□ 1.02
VCPKMT-203ENST00000484763 KLRC2P26717 231 aa21.39■■□□□ 1.02
VCPKMT-203ENST00000484763 ATP11AP98196 1134 aa21.39■■□□□ 1.02
VCPKMT-203ENST00000484763 CAMK1Q14012 370 aa21.39■■□□□ 1.02
VCPKMT-203ENST00000484763 CDO1Q16878 200 aa21.39■■□□□ 1.02
VCPKMT-203ENST00000484763 PDE12Q6L8Q7 609 aaKnown RBP21.39■■□□□ 1.02
VCPKMT-203ENST00000484763 GIPC2Q8TF65 315 aa21.39■■□□□ 1.02
VCPKMT-203ENST00000484763 KRT35Q92764 455 aa21.39■■□□□ 1.02
VCPKMT-203ENST00000484763 NCAPGQ9BPX3 1015 aa21.39■■□□□ 1.02
VCPKMT-203ENST00000484763 EHD2Q9NZN4 543 aa21.39■■□□□ 1.02
VCPKMT-203ENST00000484763 CDC23Q9UJX2 597 aa21.39■■□□□ 1.02
VCPKMT-203ENST00000484763 INSL5Q9Y5Q6 135 aa21.39■■□□□ 1.02
VCPKMT-203ENST00000484763 SRGAP2O75044 1071 aa21.39■■□□□ 1.01
VCPKMT-203ENST00000484763 FYNP06241 537 aa21.39■■□□□ 1.01
VCPKMT-203ENST00000484763 CXCR5P32302 372 aa21.39■■□□□ 1.01
VCPKMT-203ENST00000484763 PCK1P35558 622 aa21.39■■□□□ 1.01
VCPKMT-203ENST00000484763 MARCKSL1P49006 195 aa21.39■■□□□ 1.01
VCPKMT-203ENST00000484763 RGS19P49795 217 aa21.39■■□□□ 1.01
VCPKMT-203ENST00000484763 TAS2R40P59535 323 aa21.39■■□□□ 1.01
VCPKMT-203ENST00000484763 YWHAGP61981 247 aaKnown RBP eCLIP21.39■■□□□ 1.01
VCPKMT-203ENST00000484763 SLC25A52Q3SY17 297 aa21.39■■□□□ 1.01
VCPKMT-203ENST00000484763 BSPRYQ5W0U4 402 aa21.39■■□□□ 1.01
VCPKMT-203ENST00000484763 BEND5Q7L4P6 421 aa21.39■■□□□ 1.01
VCPKMT-203ENST00000484763 ARHGAP18Q8N392 663 aa21.39■■□□□ 1.01
VCPKMT-203ENST00000484763 ARFGAP1Q8N6T3 406 aa21.39■■□□□ 1.01
VCPKMT-203ENST00000484763 FAM172AQ8WUF8 416 aa21.39■■□□□ 1.01
VCPKMT-203ENST00000484763 FBXO32Q969P5 355 aa21.39■■□□□ 1.01
VCPKMT-203ENST00000484763 SLC28A3Q9HAS3 691 aa21.39■■□□□ 1.01
VCPKMT-203ENST00000484763 FBXW11Q9UKB1 542 aa21.39■■□□□ 1.01
VCPKMT-203ENST00000484763 CHD7Q9P2D1 2997 aa21.38■■□□□ 1.01
VCPKMT-203ENST00000484763 CES2O00748 559 aa21.38■■□□□ 1.01
VCPKMT-203ENST00000484763 GLUD1P00367 558 aa21.38■■□□□ 1.01
VCPKMT-203ENST00000484763 NCAM1P13591 858 aa21.38■■□□□ 1.01
VCPKMT-203ENST00000484763 IRS1P35568 1242 aa21.38■■□□□ 1.01
VCPKMT-203ENST00000484763 SULT1E1P49888 294 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms