RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 MYO15AQ9UKN7 3530 aa12.95□□□□□ -0.34
MSH5-216ENST00000484309 RNF225M0QZC1 329 aaPredicted RBP12.94□□□□□ -0.34
MSH5-216ENST00000484309 PMM2O15305 246 aa12.94□□□□□ -0.34
MSH5-216ENST00000484309 P4HA2O15460 535 aa12.94□□□□□ -0.34
MSH5-216ENST00000484309 NFATC1O95644 943 aa12.94□□□□□ -0.34
MSH5-216ENST00000484309 CYP17A1P05093 508 aa12.94□□□□□ -0.34
MSH5-216ENST00000484309 RARGP13631 454 aa12.94□□□□□ -0.34
MSH5-216ENST00000484309 GALK1P51570 392 aa12.94□□□□□ -0.34
MSH5-216ENST00000484309 PDE4CQ08493 712 aa12.94□□□□□ -0.34
MSH5-216ENST00000484309 CCINQ13939 588 aa12.94□□□□□ -0.34
MSH5-216ENST00000484309 TMEM196Q5HYL7 178 aa12.94□□□□□ -0.34
MSH5-216ENST00000484309 DGKKQ5KSL6 1271 aa12.94□□□□□ -0.34
MSH5-216ENST00000484309 SNX30Q5VWJ9 437 aa12.94□□□□□ -0.34
MSH5-216ENST00000484309 PIGZQ86VD9 579 aa12.94□□□□□ -0.34
MSH5-216ENST00000484309 MLKLQ8NB16 471 aa12.94□□□□□ -0.34
MSH5-216ENST00000484309 ANKRD52Q8NB46 1076 aa12.94□□□□□ -0.34
MSH5-216ENST00000484309 RBBP8NLQ8NC74 664 aaPredicted RBP12.94□□□□□ -0.34
MSH5-216ENST00000484309 UBA3Q8TBC4 463 aa12.94□□□□□ -0.34
MSH5-216ENST00000484309 GPT2Q8TD30 523 aa12.94□□□□□ -0.34
MSH5-216ENST00000484309 TFAP2BQ92481 460 aa12.94□□□□□ -0.34
MSH5-216ENST00000484309 NDRG1Q92597 394 aaKnown RBP12.94□□□□□ -0.34
MSH5-216ENST00000484309 NKD2Q969F2 451 aaPredicted RBP12.94□□□□□ -0.34
MSH5-216ENST00000484309 IPO9Q96P70 1041 aaKnown RBP12.94□□□□□ -0.34
MSH5-216ENST00000484309 GBP4Q96PP9 640 aa12.94□□□□□ -0.34
MSH5-216ENST00000484309 P2RY13Q9BPV8 354 aa12.94□□□□□ -0.34
MSH5-216ENST00000484309 PNPLA8Q9NP80 782 aa12.94□□□□□ -0.34
MSH5-216ENST00000484309 PRMT8Q9NR22 394 aaPredicted RBP12.94□□□□□ -0.34
MSH5-216ENST00000484309 NAGPAQ9UK23 515 aa12.94□□□□□ -0.34
MSH5-216ENST00000484309 FBXO4Q9UKT5 387 aa12.94□□□□□ -0.34
MSH5-216ENST00000484309 SH3BP1Q9Y3L3 701 aa12.94□□□□□ -0.34
MSH5-216ENST00000484309 RALGAPA1Q6GYQ0 2036 aa12.94□□□□□ -0.34
MSH5-216ENST00000484309 DMDP11532 3685 aa12.94□□□□□ -0.34
MSH5-216ENST00000484309 SPAG17Q6Q759 2223 aa12.93□□□□□ -0.34
MSH5-216ENST00000484309 PRR23AA6NEV1 266 aa12.93□□□□□ -0.34
MSH5-216ENST00000484309 PROB1E7EW31 1015 aa12.93□□□□□ -0.34
MSH5-216ENST00000484309 TRDMT1O14717 391 aaKnown RBP12.93□□□□□ -0.34
MSH5-216ENST00000484309 VDRP11473 427 aa12.93□□□□□ -0.34
MSH5-216ENST00000484309 BRD2P25440 801 aaKnown RBP12.93□□□□□ -0.34
MSH5-216ENST00000484309 MTIF2P46199 727 aaKnown RBP12.93□□□□□ -0.34
MSH5-216ENST00000484309 TUBP50607 506 aa12.93□□□□□ -0.34
MSH5-216ENST00000484309 TKTL1P51854 596 aa12.93□□□□□ -0.34
MSH5-216ENST00000484309 BCAT1P54687 386 aa12.93□□□□□ -0.34
MSH5-216ENST00000484309 APBA1Q02410 837 aa12.93□□□□□ -0.34
MSH5-216ENST00000484309 GRSF1Q12849 480 aaKnown RBP eCLIP12.93□□□□□ -0.34
MSH5-216ENST00000484309 NR1H3Q13133 447 aa12.93□□□□□ -0.34
MSH5-216ENST00000484309 C10orf120Q5SQS8 335 aa12.93□□□□□ -0.34
MSH5-216ENST00000484309 GJB7Q6PEY0 223 aa12.93□□□□□ -0.34
MSH5-216ENST00000484309 SCD5Q86SK9 330 aa12.93□□□□□ -0.34
MSH5-216ENST00000484309 DDX42Q86XP3 938 aaKnown RBP eCLIP12.93□□□□□ -0.34
MSH5-216ENST00000484309 IRF2BP1Q8IU81 584 aa12.93□□□□□ -0.34
MSH5-216ENST00000484309 BBS7Q8IWZ6 715 aa12.93□□□□□ -0.34
MSH5-216ENST00000484309 CD101Q93033 1021 aa12.93□□□□□ -0.34
MSH5-216ENST00000484309 KREMEN1Q96MU8 473 aa12.93□□□□□ -0.34
MSH5-216ENST00000484309 ZSWIM1Q9BR11 485 aa12.93□□□□□ -0.34
MSH5-216ENST00000484309 FAM124BQ9H5Z6 455 aaPredicted RBP12.93□□□□□ -0.34
MSH5-216ENST00000484309 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.93□□□□□ -0.34
MSH5-216ENST00000484309 POLR3BQ9NW08 1133 aaPredicted RBP12.93□□□□□ -0.34
MSH5-216ENST00000484309 HESX1Q9UBX0 185 aa12.93□□□□□ -0.34
MSH5-216ENST00000484309 ANTXRLA6NF34 631 aa12.92□□□□□ -0.34
MSH5-216ENST00000484309 O00370 1275 aa12.92□□□□□ -0.34
MSH5-216ENST00000484309 PIK3R2O00459 728 aa12.92□□□□□ -0.34
MSH5-216ENST00000484309 RNF40O75150 1001 aa12.92□□□□□ -0.34
MSH5-216ENST00000484309 KRT5P13647 590 aa12.92□□□□□ -0.34
MSH5-216ENST00000484309 SLC9A1P19634 815 aa12.92□□□□□ -0.34
MSH5-216ENST00000484309 ATP5C1P36542 298 aaKnown RBP12.92□□□□□ -0.34
MSH5-216ENST00000484309 OPRD1P41143 372 aa12.92□□□□□ -0.34
MSH5-216ENST00000484309 CXCL12P48061 93 aa12.92□□□□□ -0.34
MSH5-216ENST00000484309 RGS7P49802 495 aa12.92□□□□□ -0.34
MSH5-216ENST00000484309 CCR3P51677 355 aa12.92□□□□□ -0.34
MSH5-216ENST00000484309 SLC8A3P57103 927 aa12.92□□□□□ -0.34
MSH5-216ENST00000484309 AMPD2Q01433 879 aa12.92□□□□□ -0.34
MSH5-216ENST00000484309 DMWDQ09019 674 aa12.92□□□□□ -0.34
MSH5-216ENST00000484309 ADIGQ0VDE8 80 aa12.92□□□□□ -0.34
MSH5-216ENST00000484309 BST2Q10589 180 aaKnown RBP12.92□□□□□ -0.34
MSH5-216ENST00000484309 DHCR24Q15392 516 aa12.92□□□□□ -0.34
MSH5-216ENST00000484309 GAB4Q2WGN9 574 aa12.92□□□□□ -0.34
MSH5-216ENST00000484309 ZC3H14Q6PJT7 736 aaKnown RBP12.92□□□□□ -0.34
MSH5-216ENST00000484309 CCDC186Q7Z3E2 898 aa12.92□□□□□ -0.34
MSH5-216ENST00000484309 MIB1Q86YT6 1006 aa12.92□□□□□ -0.34
MSH5-216ENST00000484309 SPEM1Q8N4L4 309 aa12.92□□□□□ -0.34
MSH5-216ENST00000484309 EZH1Q92800 747 aaPredicted RBP12.92□□□□□ -0.34
MSH5-216ENST00000484309 KLF16Q9BXK1 252 aaPredicted RBP12.92□□□□□ -0.34
MSH5-216ENST00000484309 ULBP1Q9BZM6 244 aa12.92□□□□□ -0.34
MSH5-216ENST00000484309 UBE2TQ9NPD8 197 aaPredicted RBP12.92□□□□□ -0.34
MSH5-216ENST00000484309 CYLDQ9NQC7 956 aa12.92□□□□□ -0.34
MSH5-216ENST00000484309 RASAL2Q9UJF2 1139 aa12.92□□□□□ -0.34
MSH5-216ENST00000484309 USP3Q9Y6I4 520 aa12.92□□□□□ -0.34
MSH5-216ENST00000484309 VPS13AQ96RL7 3174 aa12.91□□□□□ -0.34
MSH5-216ENST00000484309 E2F8A0AVK6 867 aa12.91□□□□□ -0.34
MSH5-216ENST00000484309 M0QYV0 167 aa12.91□□□□□ -0.34
MSH5-216ENST00000484309 SLC9A3R1O14745 358 aaPredicted RBP12.91□□□□□ -0.34
MSH5-216ENST00000484309 XPO1O14980 1071 aaKnown RBP12.91□□□□□ -0.34
MSH5-216ENST00000484309 HMBSP08397 361 aa12.91□□□□□ -0.34
MSH5-216ENST00000484309 PAEPP09466 180 aa12.91□□□□□ -0.34
MSH5-216ENST00000484309 TDGF1P13385 188 aa12.91□□□□□ -0.34
MSH5-216ENST00000484309 LCP1P13796 627 aa12.91□□□□□ -0.34
MSH5-216ENST00000484309 SLC6A11P48066 632 aa12.91□□□□□ -0.34
MSH5-216ENST00000484309 SEC13P55735 322 aa12.91□□□□□ -0.34
MSH5-216ENST00000484309 GCNT1Q02742 428 aa12.91□□□□□ -0.34
MSH5-216ENST00000484309 KDSRQ06136 332 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms