RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 FAM153AQ9UHL3 310 aa27.42■■□□□ 1.98
SHOX2-204ENST00000483851 ADAM28Q9UKQ2 775 aa27.42■■□□□ 1.98
SHOX2-204ENST00000483851 ZNF487B1APH4 448 aa27.42■■□□□ 1.98
SHOX2-204ENST00000483851 GAS8O95995 478 aa27.42■■□□□ 1.98
SHOX2-204ENST00000483851 CYP2C18P33260 490 aa27.42■■□□□ 1.98
SHOX2-204ENST00000483851 NOS2P35228 1153 aa27.42■■□□□ 1.98
SHOX2-204ENST00000483851 ATP11AP98196 1134 aa27.42■■□□□ 1.98
SHOX2-204ENST00000483851 TRADDQ15628 312 aa27.42■■□□□ 1.98
SHOX2-204ENST00000483851 TCTN1Q2MV58 587 aa27.42■■□□□ 1.98
SHOX2-204ENST00000483851 SMTNL2Q2TAL5 461 aa27.42■■□□□ 1.98
SHOX2-204ENST00000483851 SLC25A52Q3SY17 297 aa27.42■■□□□ 1.98
SHOX2-204ENST00000483851 KCNT1Q5JUK3 1230 aa27.42■■□□□ 1.98
SHOX2-204ENST00000483851 SH3PXD2AQ5TCZ1 1133 aa27.42■■□□□ 1.98
SHOX2-204ENST00000483851 CNKSR3Q6P9H4 555 aa27.42■■□□□ 1.98
SHOX2-204ENST00000483851 BBS12Q6ZW61 710 aa27.42■■□□□ 1.98
SHOX2-204ENST00000483851 PEBP4Q96S96 227 aa27.42■■□□□ 1.98
SHOX2-204ENST00000483851 HHLA1C9JL84 531 aa27.41■■□□□ 1.98
SHOX2-204ENST00000483851 NRP1O14786 923 aa27.41■■□□□ 1.98
SHOX2-204ENST00000483851 DAPK3O43293 454 aa27.41■■□□□ 1.98
SHOX2-204ENST00000483851 KRT10P13645 584 aa27.41■■□□□ 1.98
SHOX2-204ENST00000483851 ECHS1P30084 290 aa27.41■■□□□ 1.98
SHOX2-204ENST00000483851 ELAVL2Q12926 359 aaKnown RBP27.41■■□□□ 1.98
SHOX2-204ENST00000483851 HLTFQ14527 1009 aaKnown RBP eCLIP27.41■■□□□ 1.98
SHOX2-204ENST00000483851 LLGL1Q15334 1064 aa27.41■■□□□ 1.98
SHOX2-204ENST00000483851 CDO1Q16878 200 aa27.41■■□□□ 1.98
SHOX2-204ENST00000483851 DCP1BQ8IZD4 617 aaKnown RBP27.41■■□□□ 1.98
SHOX2-204ENST00000483851 IRGQQ8WZA9 623 aa27.41■■□□□ 1.98
SHOX2-204ENST00000483851 NT5C3BQ969T7 300 aa27.41■■□□□ 1.98
SHOX2-204ENST00000483851 SLC2A13Q96QE2 648 aa27.41■■□□□ 1.98
SHOX2-204ENST00000483851 TRIM51Q9BSJ1 452 aa27.41■■□□□ 1.98
SHOX2-204ENST00000483851 STAP1Q9ULZ2 295 aa27.41■■□□□ 1.98
SHOX2-204ENST00000483851 PTPRDP23468 1912 aa27.41■■□□□ 1.98
SHOX2-204ENST00000483851 MICAL3Q7RTP6 2002 aa27.41■■□□□ 1.98
SHOX2-204ENST00000483851 F8W810 466 aa27.4■■□□□ 1.98
SHOX2-204ENST00000483851 ARSEP51690 589 aa27.4■■□□□ 1.98
SHOX2-204ENST00000483851 HDAC4P56524 1084 aa27.4■■□□□ 1.98
SHOX2-204ENST00000483851 DAOAP59103 153 aa27.4■■□□□ 1.98
SHOX2-204ENST00000483851 IKBKEQ14164 716 aa27.4■■□□□ 1.98
SHOX2-204ENST00000483851 FAM204AQ9H8W3 233 aa27.4■■□□□ 1.98
SHOX2-204ENST00000483851 POPDC2Q9HBU9 364 aa27.4■■□□□ 1.98
SHOX2-204ENST00000483851 TMEM39AQ9NV64 488 aa27.4■■□□□ 1.98
SHOX2-204ENST00000483851 DRG1Q9Y295 367 aaKnown RBP27.4■■□□□ 1.98
SHOX2-204ENST00000483851 R3HDM2Q9Y2K5 976 aaKnown RBP27.4■■□□□ 1.98
SHOX2-204ENST00000483851 PRG3Q9Y2Y8 225 aaPredicted RBP27.4■■□□□ 1.98
SHOX2-204ENST00000483851 CLTBP09497 229 aa27.4■■□□□ 1.98
SHOX2-204ENST00000483851 HSPA8P11142 646 aaKnown RBP27.4■■□□□ 1.98
SHOX2-204ENST00000483851 C1QTNF8P60827 252 aa27.4■■□□□ 1.98
SHOX2-204ENST00000483851 KAZNQ674X7 775 aa27.4■■□□□ 1.98
SHOX2-204ENST00000483851 IQCKQ8N0W5 287 aa27.4■■□□□ 1.98
SHOX2-204ENST00000483851 KCNK16Q96T55 309 aa27.4■■□□□ 1.98
SHOX2-204ENST00000483851 ZCWPW1Q9H0M4 648 aa27.4■■□□□ 1.98
SHOX2-204ENST00000483851 C11orf49Q9H6J7 331 aa27.4■■□□□ 1.98
SHOX2-204ENST00000483851 RRN3Q9NYV6 651 aa27.4■■□□□ 1.98
SHOX2-204ENST00000483851 NLRC5Q86WI3 1866 aa27.39■■□□□ 1.98
SHOX2-204ENST00000483851 KCNJ1P48048 391 aa27.39■■□□□ 1.98
SHOX2-204ENST00000483851 NFE2Q16621 373 aaPredicted RBP27.39■■□□□ 1.98
SHOX2-204ENST00000483851 LRRTM3Q86VH5 581 aa27.39■■□□□ 1.98
SHOX2-204ENST00000483851 PSTKQ8IV42 348 aaKnown RBP27.39■■□□□ 1.98
SHOX2-204ENST00000483851 DEFB106AQ8N104 65 aa27.39■■□□□ 1.98
SHOX2-204ENST00000483851 LRRC43Q8N309 656 aa27.39■■□□□ 1.98
SHOX2-204ENST00000483851 DIS3LQ8TF46 1054 aaKnown RBP27.39■■□□□ 1.98
SHOX2-204ENST00000483851 HSPH1Q92598 858 aa27.39■■□□□ 1.98
SHOX2-204ENST00000483851 FAM149B1Q96BN6 582 aa27.39■■□□□ 1.98
SHOX2-204ENST00000483851 ACSF2Q96CM8 615 aaPredicted RBP27.39■■□□□ 1.98
SHOX2-204ENST00000483851 FUBP3Q96I24 572 aaKnown RBP eCLIP27.39■■□□□ 1.98
SHOX2-204ENST00000483851 OXCT2Q9BYC2 517 aaPredicted RBP27.39■■□□□ 1.98
SHOX2-204ENST00000483851 ULBP1Q9BZM6 244 aa27.39■■□□□ 1.98
SHOX2-204ENST00000483851 ATP11BQ9Y2G3 1177 aa27.39■■□□□ 1.98
SHOX2-204ENST00000483851 PTK6Q13882 451 aa27.38■■□□□ 1.97
SHOX2-204ENST00000483851 PPP1R7Q15435 360 aa27.38■■□□□ 1.97
SHOX2-204ENST00000483851 BNIPLQ7Z465 357 aa27.38■■□□□ 1.97
SHOX2-204ENST00000483851 SPATA2LQ8IUW3 424 aaPredicted RBP27.38■■□□□ 1.97
SHOX2-204ENST00000483851 ATG4AQ8WYN0 398 aa27.38■■□□□ 1.97
SHOX2-204ENST00000483851 NKD2Q969F2 451 aaPredicted RBP27.38■■□□□ 1.97
SHOX2-204ENST00000483851 TRIM62Q9BVG3 475 aa27.38■■□□□ 1.97
SHOX2-204ENST00000483851 STAU2Q9NUL3 570 aaKnown RBP eCLIP27.38■■□□□ 1.97
SHOX2-204ENST00000483851 TMEM30AQ9NV96 361 aa27.38■■□□□ 1.97
SHOX2-204ENST00000483851 TMLHEQ9NVH6 421 aa27.38■■□□□ 1.97
SHOX2-204ENST00000483851 FNDC1Q4ZHG4 1894 aaPredicted RBP27.38■■□□□ 1.97
SHOX2-204ENST00000483851 SF3B1O75533 1304 aaKnown RBP eCLIP27.38■■□□□ 1.97
SHOX2-204ENST00000483851 LIASO43766 372 aa27.38■■□□□ 1.97
SHOX2-204ENST00000483851 ZBED1O96006 694 aa27.38■■□□□ 1.97
SHOX2-204ENST00000483851 BDNFP23560 247 aa27.38■■□□□ 1.97
SHOX2-204ENST00000483851 ADCY2Q08462 1091 aa27.38■■□□□ 1.97
SHOX2-204ENST00000483851 TFDP2Q14188 446 aa27.38■■□□□ 1.97
SHOX2-204ENST00000483851 MRPL58Q14197 206 aaKnown RBP27.38■■□□□ 1.97
SHOX2-204ENST00000483851 ERMARDQ5T6L9 678 aa27.38■■□□□ 1.97
SHOX2-204ENST00000483851 PM20D1Q6GTS8 502 aa27.38■■□□□ 1.97
SHOX2-204ENST00000483851 SCYL2Q6P3W7 929 aa27.38■■□□□ 1.97
SHOX2-204ENST00000483851 NPY6RQ99463 290 aa27.38■■□□□ 1.97
SHOX2-204ENST00000483851 OR6C75A6NL08 312 aa27.37■■□□□ 1.97
SHOX2-204ENST00000483851 NDUFV1P49821 464 aa27.37■■□□□ 1.97
SHOX2-204ENST00000483851 CACNA2D1P54289 1103 aa27.37■■□□□ 1.97
SHOX2-204ENST00000483851 CDH6P55285 790 aa27.37■■□□□ 1.97
SHOX2-204ENST00000483851 SNX1Q13596 522 aa27.37■■□□□ 1.97
SHOX2-204ENST00000483851 DEFB128Q7Z7B8 93 aa27.37■■□□□ 1.97
SHOX2-204ENST00000483851 DDX42Q86XP3 938 aaKnown RBP eCLIP27.37■■□□□ 1.97
SHOX2-204ENST00000483851 CCHCR1Q8TD31 782 aa27.37■■□□□ 1.97
SHOX2-204ENST00000483851 DPH5Q9H2P9 285 aa27.37■■□□□ 1.97
SHOX2-204ENST00000483851 PATJQ8NI35 1801 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms