RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 COL4A4P53420 1690 aaPredicted RBP14.68□□□□□ -0.06
CLK3-204ENST00000483723 ZNF487B1APH4 448 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 NRP1O14786 923 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 MDM4O15151 490 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 LIASO43766 372 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 ALDH2P05091 517 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 CD48P09326 243 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 TFE3P19532 575 aaPredicted RBP14.68□□□□□ -0.06
CLK3-204ENST00000483723 CYP2C18P33260 490 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 NOS2P35228 1153 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 TNNT3P45378 269 aaPredicted RBP14.68□□□□□ -0.06
CLK3-204ENST00000483723 GJA8P48165 433 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 TSPY1Q01534 308 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 SNX1Q13596 522 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 PTK6Q13882 451 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 CDO1Q16878 200 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 SLC25A52Q3SY17 297 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 KAZNQ674X7 775 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 PM20D1Q6GTS8 502 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 ZDHHC24Q6UX98 284 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 ABI1Q8IZP0 508 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 SLC35B2Q8TB61 432 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 NDRG1Q92597 394 aaKnown RBP14.68□□□□□ -0.06
CLK3-204ENST00000483723 NKD2Q969F2 451 aaPredicted RBP14.68□□□□□ -0.06
CLK3-204ENST00000483723 GDAP1L1Q96MZ0 367 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 NPY6RQ99463 290 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 TMEM175Q9BSA9 504 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 ULBP1Q9BZM6 244 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 FAM129AQ9BZQ8 928 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 ZCWPW1Q9H0M4 648 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 DPH5Q9H2P9 285 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 NGRNQ9NPE2 291 aaKnown RBP14.68□□□□□ -0.06
CLK3-204ENST00000483723 SNX24Q9Y343 169 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 MICAL3Q7RTP6 2002 aa14.68□□□□□ -0.06
CLK3-204ENST00000483723 VWA8A3KMH1 1905 aa14.67□□□□□ -0.06
CLK3-204ENST00000483723 TADA2AO75478 443 aa14.67□□□□□ -0.06
CLK3-204ENST00000483723 FYNP06241 537 aa14.67□□□□□ -0.06
CLK3-204ENST00000483723 IL4RP24394 825 aa14.67□□□□□ -0.06
CLK3-204ENST00000483723 IVDP26440 423 aa14.67□□□□□ -0.06
CLK3-204ENST00000483723 HSPA9P38646 679 aaKnown RBP14.67□□□□□ -0.06
CLK3-204ENST00000483723 RPL21P46778 160 aaKnown RBP14.67□□□□□ -0.06
CLK3-204ENST00000483723 GATMP50440 423 aa14.67□□□□□ -0.06
CLK3-204ENST00000483723 LMNB2Q03252 620 aa14.67□□□□□ -0.06
CLK3-204ENST00000483723 HLTFQ14527 1009 aaKnown RBP eCLIP14.67□□□□□ -0.06
CLK3-204ENST00000483723 BHLHA9Q7RTU4 235 aa14.67□□□□□ -0.06
CLK3-204ENST00000483723 GPRIN1Q7Z2K8 1008 aa14.67□□□□□ -0.06
CLK3-204ENST00000483723 KRT222Q8N1A0 295 aa14.67□□□□□ -0.06
CLK3-204ENST00000483723 SIX6OS1Q8N1H7 587 aa14.67□□□□□ -0.06
CLK3-204ENST00000483723 TTC13Q8NBP0 860 aa14.67□□□□□ -0.06
CLK3-204ENST00000483723 DIS3LQ8TF46 1054 aaKnown RBP14.67□□□□□ -0.06
CLK3-204ENST00000483723 IRGQQ8WZA9 623 aa14.67□□□□□ -0.06
CLK3-204ENST00000483723 COLEC11Q9BWP8 271 aa14.67□□□□□ -0.06
CLK3-204ENST00000483723 MRPL9Q9BYD2 267 aaKnown RBP14.67□□□□□ -0.06
CLK3-204ENST00000483723 PPP1R12CQ9BZL4 782 aa14.67□□□□□ -0.06
CLK3-204ENST00000483723 ADAM28Q9UKQ2 775 aa14.67□□□□□ -0.06
CLK3-204ENST00000483723 USP3Q9Y6I4 520 aa14.67□□□□□ -0.06
CLK3-204ENST00000483723 PATJQ8NI35 1801 aa14.67□□□□□ -0.06
CLK3-204ENST00000483723 CST8O60676 142 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 BDNFP23560 247 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 RFC2P35250 354 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 CDH6P55285 790 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 DPYSL3Q14195 570 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 OASLQ15646 514 aaKnown RBP14.66□□□□□ -0.06
CLK3-204ENST00000483723 PKN2Q16513 984 aaKnown RBP14.66□□□□□ -0.06
CLK3-204ENST00000483723 ERMARDQ5T6L9 678 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 OTUD1Q5VV17 481 aaPredicted RBP14.66□□□□□ -0.06
CLK3-204ENST00000483723 MAP7D3Q8IWC1 876 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 TSEN2Q8NCE0 465 aaKnown RBP14.66□□□□□ -0.06
CLK3-204ENST00000483723 HSPH1Q92598 858 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 FAF2Q96CS3 445 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 SNRNP25Q9BV90 132 aaKnown RBP14.66□□□□□ -0.06
CLK3-204ENST00000483723 TXLNGYQ9BZA5 131 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 TRIM31Q9BZY9 425 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 POPDC2Q9HBU9 364 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 DMAP1Q9NPF5 467 aaPredicted RBP14.66□□□□□ -0.06
CLK3-204ENST00000483723 MARCH5Q9NX47 278 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 PRG3Q9Y2Y8 225 aaPredicted RBP14.66□□□□□ -0.06
CLK3-204ENST00000483723 SPDYE4A6NLX3 237 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 GAS8O95995 478 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 GALTP07902 379 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 FGFR3P22607 806 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 SLC11A1P49279 550 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 RABGGTBP53611 331 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 KRT17Q04695 432 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 KCTD19Q17RG1 926 aaPredicted RBP14.66□□□□□ -0.06
CLK3-204ENST00000483723 ALS2CLQ60I27 953 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 SCYL2Q6P3W7 929 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 CNKSR3Q6P9H4 555 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 C4orf50Q6ZRC1 276 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 HFE2Q6ZVN8 426 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 BEND5Q7L4P6 421 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 PSTKQ8IV42 348 aaKnown RBP14.66□□□□□ -0.06
CLK3-204ENST00000483723 DCP1BQ8IZD4 617 aaKnown RBP14.66□□□□□ -0.06
CLK3-204ENST00000483723 IQCKQ8N0W5 287 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 ART4Q93070 314 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 RNF157Q96PX1 679 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 RHOBTB2Q9BYZ6 727 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 ACBD3Q9H3P7 528 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 PCDH18Q9HCL0 1135 aa14.66□□□□□ -0.06
CLK3-204ENST00000483723 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms