RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 SPAG5Q96R06 1193 aa16.42■□□□□ 0.22
RPP40-206ENST00000483546 SLC22A12Q96S37 553 aa16.42■□□□□ 0.22
RPP40-206ENST00000483546 LHX5Q9H2C1 402 aa16.42■□□□□ 0.22
RPP40-206ENST00000483546 CEP83Q9Y592 693 aa16.42■□□□□ 0.22
RPP40-206ENST00000483546 TICRRQ7Z2Z1 1910 aa16.41■□□□□ 0.22
RPP40-206ENST00000483546 SART1O43290 800 aaKnown RBP16.41■□□□□ 0.22
RPP40-206ENST00000483546 TLR5O60602 858 aa16.41■□□□□ 0.22
RPP40-206ENST00000483546 CFHP08603 1231 aa16.41■□□□□ 0.22
RPP40-206ENST00000483546 KRT9P35527 623 aa16.41■□□□□ 0.22
RPP40-206ENST00000483546 JAM2P57087 298 aa16.41■□□□□ 0.22
RPP40-206ENST00000483546 SNX16P57768 344 aa16.41■□□□□ 0.22
RPP40-206ENST00000483546 ZNF445P59923 1031 aa16.41■□□□□ 0.22
RPP40-206ENST00000483546 PRKCQQ04759 706 aa16.41■□□□□ 0.22
RPP40-206ENST00000483546 ADIGQ0VDE8 80 aa16.41■□□□□ 0.22
RPP40-206ENST00000483546 GRM2Q14416 872 aa16.41■□□□□ 0.22
RPP40-206ENST00000483546 ZNF77Q15935 545 aa16.41■□□□□ 0.22
RPP40-206ENST00000483546 CC2D1AQ6P1N0 951 aaPredicted RBP16.41■□□□□ 0.22
RPP40-206ENST00000483546 ZNF677Q86XU0 584 aa16.41■□□□□ 0.22
RPP40-206ENST00000483546 ST13P5Q8NFI4 369 aaPredicted RBP16.41■□□□□ 0.22
RPP40-206ENST00000483546 NOX5Q96PH1 765 aa16.41■□□□□ 0.22
RPP40-206ENST00000483546 CYP2S1Q96SQ9 504 aa16.41■□□□□ 0.22
RPP40-206ENST00000483546 NACA2Q9H009 215 aa16.41■□□□□ 0.22
RPP40-206ENST00000483546 SMOC2Q9H3U7 446 aa16.41■□□□□ 0.22
RPP40-206ENST00000483546 ARHGEF3Q9NR81 526 aa16.41■□□□□ 0.22
RPP40-206ENST00000483546 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.41■□□□□ 0.22
RPP40-206ENST00000483546 NAGPAQ9UK23 515 aa16.41■□□□□ 0.22
RPP40-206ENST00000483546 MYO6Q9UM54 1294 aa16.41■□□□□ 0.22
RPP40-206ENST00000483546 COL4A2P08572 1712 aa16.41■□□□□ 0.22
RPP40-206ENST00000483546 A0A1W2PQH9 124 aa16.4■□□□□ 0.22
RPP40-206ENST00000483546 TULP2O00295 520 aa16.4■□□□□ 0.22
RPP40-206ENST00000483546 COCHO43405 550 aa16.4■□□□□ 0.22
RPP40-206ENST00000483546 MBL2P11226 248 aaPredicted RBP16.4■□□□□ 0.22
RPP40-206ENST00000483546 GLULP15104 373 aa16.4■□□□□ 0.22
RPP40-206ENST00000483546 CYP11B1P15538 503 aa16.4■□□□□ 0.22
RPP40-206ENST00000483546 SOX5P35711 763 aa16.4■□□□□ 0.22
RPP40-206ENST00000483546 ATP5C1P36542 298 aaKnown RBP16.4■□□□□ 0.22
RPP40-206ENST00000483546 STAT1P42224 750 aa16.4■□□□□ 0.22
RPP40-206ENST00000483546 KLK7P49862 253 aa16.4■□□□□ 0.22
RPP40-206ENST00000483546 GOLGA8FQ08AF8 430 aa16.4■□□□□ 0.22
RPP40-206ENST00000483546 GOLGA8DPQ0D2H9 430 aa16.4■□□□□ 0.22
RPP40-206ENST00000483546 MTF1Q14872 753 aa16.4■□□□□ 0.22
RPP40-206ENST00000483546 NR1I3Q14994 352 aa16.4■□□□□ 0.22
RPP40-206ENST00000483546 PDGFRLQ15198 375 aa16.4■□□□□ 0.22
RPP40-206ENST00000483546 PMF1Q6P1K2 205 aa16.4■□□□□ 0.22
RPP40-206ENST00000483546 SLC47A2Q86VL8 602 aa16.4■□□□□ 0.22
RPP40-206ENST00000483546 TRIM62Q9BVG3 475 aa16.4■□□□□ 0.22
RPP40-206ENST00000483546 ULBP1Q9BZM6 244 aa16.4■□□□□ 0.22
RPP40-206ENST00000483546 RNF38Q9H0F5 515 aa16.4■□□□□ 0.22
RPP40-206ENST00000483546 SMG9Q9H0W8 520 aaKnown RBP16.4■□□□□ 0.22
RPP40-206ENST00000483546 C11orf16Q9NQ32 467 aa16.4■□□□□ 0.22
RPP40-206ENST00000483546 OLA1Q9NTK5 396 aaKnown RBP16.4■□□□□ 0.22
RPP40-206ENST00000483546 CCL26Q9Y258 94 aa16.4■□□□□ 0.22
RPP40-206ENST00000483546 ARNTLO00327 626 aa16.39■□□□□ 0.21
RPP40-206ENST00000483546 SLC9A3R1O14745 358 aaPredicted RBP16.39■□□□□ 0.21
RPP40-206ENST00000483546 TPM3P06753 285 aa16.39■□□□□ 0.21
RPP40-206ENST00000483546 CCDC172P0C7W6 258 aa16.39■□□□□ 0.21
RPP40-206ENST00000483546 RARGP13631 454 aa16.39■□□□□ 0.21
RPP40-206ENST00000483546 YWHAGP61981 247 aaKnown RBP eCLIP16.39■□□□□ 0.21
RPP40-206ENST00000483546 FANCCQ00597 558 aa16.39■□□□□ 0.21
RPP40-206ENST00000483546 MLF2Q15773 248 aaPredicted RBP16.39■□□□□ 0.21
RPP40-206ENST00000483546 DENND1BQ6P3S1 775 aa16.39■□□□□ 0.21
RPP40-206ENST00000483546 CACNA2D4Q7Z3S7 1137 aa16.39■□□□□ 0.21
RPP40-206ENST00000483546 SCD5Q86SK9 330 aa16.39■□□□□ 0.21
RPP40-206ENST00000483546 CSGALNACT1Q8TDX6 532 aa16.39■□□□□ 0.21
RPP40-206ENST00000483546 SH3RF2Q8TEC5 729 aa16.39■□□□□ 0.21
RPP40-206ENST00000483546 IQCDQ96DY2 449 aa16.39■□□□□ 0.21
RPP40-206ENST00000483546 LRRC3BQ96PB8 259 aa16.39■□□□□ 0.21
RPP40-206ENST00000483546 FAM83CQ9BQN1 747 aa16.39■□□□□ 0.21
RPP40-206ENST00000483546 SLC4A5Q9BY07 1137 aa16.39■□□□□ 0.21
RPP40-206ENST00000483546 EDEM3Q9BZQ6 932 aa16.39■□□□□ 0.21
RPP40-206ENST00000483546 CCSER2Q9H7U1 834 aa16.39■□□□□ 0.21
RPP40-206ENST00000483546 NMUR1Q9HB89 426 aa16.39■□□□□ 0.21
RPP40-206ENST00000483546 ACP6Q9NPH0 428 aa16.39■□□□□ 0.21
RPP40-206ENST00000483546 NLRC4Q9NPP4 1024 aa16.39■□□□□ 0.21
RPP40-206ENST00000483546 DNMT3LQ9UJW3 386 aa16.39■□□□□ 0.21
RPP40-206ENST00000483546 CPQQ9Y646 472 aa16.39■□□□□ 0.21
RPP40-206ENST00000483546 TRIOO75962 3097 aa16.39■□□□□ 0.21
RPP40-206ENST00000483546 E2F8A0AVK6 867 aa16.38■□□□□ 0.21
RPP40-206ENST00000483546 LEFTY2O00292 366 aa16.38■□□□□ 0.21
RPP40-206ENST00000483546 EPHB6O15197 1021 aa16.38■□□□□ 0.21
RPP40-206ENST00000483546 TEX33O43247 280 aa16.38■□□□□ 0.21
RPP40-206ENST00000483546 LSM8O95777 96 aaKnown RBP16.38■□□□□ 0.21
RPP40-206ENST00000483546 CALCAP01258 141 aa16.38■□□□□ 0.21
RPP40-206ENST00000483546 CDH5P33151 784 aaPredicted RBP16.38■□□□□ 0.21
RPP40-206ENST00000483546 RGS7P49802 495 aa16.38■□□□□ 0.21
RPP40-206ENST00000483546 UBASH3AP57075 661 aa16.38■□□□□ 0.21
RPP40-206ENST00000483546 STARD6P59095 220 aa16.38■□□□□ 0.21
RPP40-206ENST00000483546 DAOAP59103 153 aa16.38■□□□□ 0.21
RPP40-206ENST00000483546 PDCLQ13371 301 aa16.38■□□□□ 0.21
RPP40-206ENST00000483546 SLC44A4Q53GD3 710 aa16.38■□□□□ 0.21
RPP40-206ENST00000483546 BTBD8Q5XKL5 378 aa16.38■□□□□ 0.21
RPP40-206ENST00000483546 TMEM110Q86TL2 294 aa16.38■□□□□ 0.21
RPP40-206ENST00000483546 SIX5Q8N196 739 aa16.38■□□□□ 0.21
RPP40-206ENST00000483546 EPS8L1Q8TE68 723 aa16.38■□□□□ 0.21
RPP40-206ENST00000483546 OSCP1Q8WVF1 389 aa16.38■□□□□ 0.21
RPP40-206ENST00000483546 GOLGA1Q92805 767 aa16.38■□□□□ 0.21
RPP40-206ENST00000483546 PBXIP1Q96AQ6 731 aa16.38■□□□□ 0.21
RPP40-206ENST00000483546 OTUB2Q96DC9 234 aa16.38■□□□□ 0.21
RPP40-206ENST00000483546 NAP1L5Q96NT1 182 aaPredicted RBP16.38■□□□□ 0.21
RPP40-206ENST00000483546 NUP58Q9BVL2 599 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms