RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 MLLT6P55198 1093 aaPredicted RBP8.12□□□□□ -1.11
COL4A5-205ENST00000483338 NPY5RQ15761 445 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 DGKDQ16760 1214 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 HSF5Q4G112 596 aaPredicted RBP8.12□□□□□ -1.11
COL4A5-205ENST00000483338 RALGPS1Q5JS13 557 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 PERM1Q5SV97 790 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 NOP9Q86U38 636 aaKnown RBP8.12□□□□□ -1.11
COL4A5-205ENST00000483338 TICAM1Q8IUC6 712 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 PQLC1Q8N2U9 271 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 PSD4Q8NDX1 1056 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 JADE3Q92613 823 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 CDK5RAP1Q96SZ6 601 aaKnown RBP8.12□□□□□ -1.11
COL4A5-205ENST00000483338 TSSK1BQ9BXA7 367 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 ADAM33Q9BZ11 813 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 C1orf21Q9H246 121 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 KANSL2Q9H9L4 492 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 SCUBE2Q9NQ36 999 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 TXNDC16Q9P2K2 825 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 TRAF6Q9Y4K3 522 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 NID2Q14112 1375 aa8.12□□□□□ -1.11
COL4A5-205ENST00000483338 SF3B1O75533 1304 aaKnown RBP eCLIP8.12□□□□□ -1.11
COL4A5-205ENST00000483338 FAM237BA0A1B0GVD1 139 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 TRIM77I1YAP6 450 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 hCG_2039718K7EN88 272 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 GPAA1O43292 621 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 ACSL4O60488 711 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 KRT6AP02538 564 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 KRT6BP04259 564 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 IGKV5-2P06315 115 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 GALNT2Q10471 571 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 STAT4Q14765 748 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 CLUL1Q15846 466 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 INAVAQ3KP66 663 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 ZBED5Q49AG3 693 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 FRA10AC1Q70Z53 315 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 KBTBD6Q86V97 674 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 DCPSQ96C86 337 aaKnown RBP8.11□□□□□ -1.11
COL4A5-205ENST00000483338 RMDN1Q96DB5 314 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 C9orf72Q96LT7 481 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 C7orf26Q96N11 449 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 WRNIP1Q96S55 665 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 TRIM9Q9C026 710 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 SMARCAD1Q9H4L7 1026 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 MANSC1Q9H8J5 431 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 ZSWIM5Q9P217 1185 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 ATP2A1O14983 1001 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 SNPHO15079 494 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 BMP10O95393 424 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 H6PDO95479 791 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 GSTM1P09488 218 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 KCNQ4P56696 695 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 PPATQ06203 517 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 TFDP1Q14186 410 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 GALNT18Q6P9A2 607 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 POTEAQ6S8J7 498 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 BEND7Q8N7W2 519 aaPredicted RBP8.11□□□□□ -1.11
COL4A5-205ENST00000483338 SLC35G2Q8TBE7 412 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 GRK7Q8WTQ7 553 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 KBTBD7Q8WVZ9 684 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 PIGBQ92521 554 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 MXD3Q9BW11 206 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 GANQ9H2C0 597 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 TMEM206Q9H813 350 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 GDAP2Q9NXN4 497 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 MOCS1Q9NZB8 636 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 WHRNQ9P202 907 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 EPS15L1Q9UBC2 864 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 SOX13Q9UN79 622 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 MEGF6O75095 1541 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 LAMB4A4D0S4 1761 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 IGSF9BQ9UPX0 1349 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 TRPM3Q9HCF6 1732 aaPredicted RBP8.11□□□□□ -1.11
COL4A5-205ENST00000483338 A0A1B0GUL6 1792 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 C1orf232A0A0U1RR37 186 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 ESYT2A0FGR8 921 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 KRT15P19012 456 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 PTGS2P35354 604 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 GNL1P36915 607 aaPredicted RBP8.11□□□□□ -1.11
COL4A5-205ENST00000483338 ASIC1P78348 528 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 DLG4P78352 724 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 C19orf57Q0VDD7 668 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 IRF5Q13568 498 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 ZNF618Q5T7W0 954 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 NXNQ6DKJ4 435 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 PPP4R4Q6NUP7 873 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 PRPF39Q86UA1 669 aaKnown RBP8.11□□□□□ -1.11
COL4A5-205ENST00000483338 CHERPQ8IWX8 916 aaKnown RBP8.11□□□□□ -1.11
COL4A5-205ENST00000483338 HERVK_113Q902F9 699 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 NUDT12Q9BQG2 462 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 SNTG2Q9NY99 539 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 POMPQ9Y244 141 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 POLHQ9Y253 713 aa8.11□□□□□ -1.11
COL4A5-205ENST00000483338 ATAD5Q96QE3 1844 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 FAM172BPA6NC97 362 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 GOLGA8JA6NMD2 632 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 POC1B-GALNT4F8VUJ3 575 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 H3BNH8 94 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 M0QX08 132 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 GIPC1O14908 333 aa8.1□□□□□ -1.11
COL4A5-205ENST00000483338 NUAK1O60285 661 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms