RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 NAGPAQ9UK23 515 aa17.45■□□□□ 0.38
HMGN1-214ENST00000482733 CA14Q9ULX7 337 aa17.45■□□□□ 0.38
HMGN1-214ENST00000482733 PCDHGC3Q9UN70 934 aa17.45■□□□□ 0.38
HMGN1-214ENST00000482733 CPQQ9Y646 472 aa17.45■□□□□ 0.38
HMGN1-214ENST00000482733 TRIOO75962 3097 aa17.45■□□□□ 0.38
HMGN1-214ENST00000482733 A0A1W2PQH9 124 aa17.44■□□□□ 0.38
HMGN1-214ENST00000482733 F8VZ95 297 aa17.44■□□□□ 0.38
HMGN1-214ENST00000482733 ARNTLO00327 626 aa17.44■□□□□ 0.38
HMGN1-214ENST00000482733 SERPINC1P01008 464 aa17.44■□□□□ 0.38
HMGN1-214ENST00000482733 RARGP13631 454 aa17.44■□□□□ 0.38
HMGN1-214ENST00000482733 GLULP15104 373 aa17.44■□□□□ 0.38
HMGN1-214ENST00000482733 CLCN1P35523 988 aa17.44■□□□□ 0.38
HMGN1-214ENST00000482733 ATP5C1P36542 298 aaKnown RBP17.44■□□□□ 0.38
HMGN1-214ENST00000482733 GPD2P43304 727 aa17.44■□□□□ 0.38
HMGN1-214ENST00000482733 ACADSBP45954 432 aa17.44■□□□□ 0.38
HMGN1-214ENST00000482733 KLK7P49862 253 aa17.44■□□□□ 0.38
HMGN1-214ENST00000482733 POLR2FP61218 127 aaKnown RBP17.44■□□□□ 0.38
HMGN1-214ENST00000482733 ADIGQ0VDE8 80 aa17.44■□□□□ 0.38
HMGN1-214ENST00000482733 PDGFRLQ15198 375 aa17.44■□□□□ 0.38
HMGN1-214ENST00000482733 PMF1Q6P1K2 205 aa17.44■□□□□ 0.38
HMGN1-214ENST00000482733 HFE2Q6ZVN8 426 aa17.44■□□□□ 0.38
HMGN1-214ENST00000482733 SUGP1Q8IWZ8 645 aaKnown RBP17.44■□□□□ 0.38
HMGN1-214ENST00000482733 FBXL6Q8N531 539 aa17.44■□□□□ 0.38
HMGN1-214ENST00000482733 ULBP1Q9BZM6 244 aa17.44■□□□□ 0.38
HMGN1-214ENST00000482733 CCSER2Q9H7U1 834 aa17.44■□□□□ 0.38
HMGN1-214ENST00000482733 NMUR1Q9HB89 426 aa17.44■□□□□ 0.38
HMGN1-214ENST00000482733 ACP6Q9NPH0 428 aa17.44■□□□□ 0.38
HMGN1-214ENST00000482733 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.44■□□□□ 0.38
HMGN1-214ENST00000482733 GREB1Q4ZG55 1949 aa17.44■□□□□ 0.38
HMGN1-214ENST00000482733 A0A1B0GTH6 734 aa17.43■□□□□ 0.38
HMGN1-214ENST00000482733 KRBA1A5PL33 1030 aa17.43■□□□□ 0.38
HMGN1-214ENST00000482733 LEFTY2O00292 366 aa17.43■□□□□ 0.38
HMGN1-214ENST00000482733 FBXO21O94952 628 aa17.43■□□□□ 0.38
HMGN1-214ENST00000482733 LCP1P13796 627 aa17.43■□□□□ 0.38
HMGN1-214ENST00000482733 KRT9P35527 623 aa17.43■□□□□ 0.38
HMGN1-214ENST00000482733 RPL34P49207 117 aaKnown RBP17.43■□□□□ 0.38
HMGN1-214ENST00000482733 RGS7P49802 495 aa17.43■□□□□ 0.38
HMGN1-214ENST00000482733 STARD6P59095 220 aa17.43■□□□□ 0.38
HMGN1-214ENST00000482733 YWHAGP61981 247 aaKnown RBP eCLIP17.43■□□□□ 0.38
HMGN1-214ENST00000482733 DENND1BQ6P3S1 775 aa17.43■□□□□ 0.38
HMGN1-214ENST00000482733 C1orf228Q6PIY5 440 aa17.43■□□□□ 0.38
HMGN1-214ENST00000482733 LRSAM1Q6UWE0 723 aa17.43■□□□□ 0.38
HMGN1-214ENST00000482733 SCD5Q86SK9 330 aa17.43■□□□□ 0.38
HMGN1-214ENST00000482733 SLC47A2Q86VL8 602 aa17.43■□□□□ 0.38
HMGN1-214ENST00000482733 OSCP1Q8WVF1 389 aa17.43■□□□□ 0.38
HMGN1-214ENST00000482733 IRGQQ8WZA9 623 aa17.43■□□□□ 0.38
HMGN1-214ENST00000482733 NOX5Q96PH1 765 aa17.43■□□□□ 0.38
HMGN1-214ENST00000482733 SPAG5Q96R06 1193 aa17.43■□□□□ 0.38
HMGN1-214ENST00000482733 FAM83CQ9BQN1 747 aa17.43■□□□□ 0.38
HMGN1-214ENST00000482733 LHX5Q9H2C1 402 aa17.43■□□□□ 0.38
HMGN1-214ENST00000482733 TSPY26PQ9H489 355 aa17.43■□□□□ 0.38
HMGN1-214ENST00000482733 GKN1Q9NS71 199 aa17.43■□□□□ 0.38
HMGN1-214ENST00000482733 DNMT3LQ9UJW3 386 aa17.43■□□□□ 0.38
HMGN1-214ENST00000482733 CEP83Q9Y592 693 aa17.43■□□□□ 0.38
HMGN1-214ENST00000482733 NUP210Q8TEM1 1887 aaPredicted RBP17.42■□□□□ 0.38
HMGN1-214ENST00000482733 MAN2B1O00754 1011 aa17.42■□□□□ 0.38
HMGN1-214ENST00000482733 SART1O43290 800 aaKnown RBP17.42■□□□□ 0.38
HMGN1-214ENST00000482733 PNMA6AP0CW24 399 aaPredicted RBP17.42■□□□□ 0.38
HMGN1-214ENST00000482733 CYP11B1P15538 503 aa17.42■□□□□ 0.38
HMGN1-214ENST00000482733 STAT1P42224 750 aa17.42■□□□□ 0.38
HMGN1-214ENST00000482733 IFNAR2P48551 515 aa17.42■□□□□ 0.38
HMGN1-214ENST00000482733 PGFP49763 221 aa17.42■□□□□ 0.38
HMGN1-214ENST00000482733 CLCN5P51795 746 aa17.42■□□□□ 0.38
HMGN1-214ENST00000482733 GOLGA8FQ08AF8 430 aa17.42■□□□□ 0.38
HMGN1-214ENST00000482733 GOLGA8DPQ0D2H9 430 aa17.42■□□□□ 0.38
HMGN1-214ENST00000482733 C8orf33Q9H7E9 229 aaPredicted RBP17.42■□□□□ 0.38
HMGN1-214ENST00000482733 ST7Q9NRC1 585 aa17.42■□□□□ 0.38
HMGN1-214ENST00000482733 HEBP1Q9NRV9 189 aa17.42■□□□□ 0.38
HMGN1-214ENST00000482733 OSER1Q9NX31 292 aa17.42■□□□□ 0.38
HMGN1-214ENST00000482733 DUS2Q9NX74 493 aaKnown RBP17.42■□□□□ 0.38
HMGN1-214ENST00000482733 SMPD4Q9NXE4 827 aa17.42■□□□□ 0.38
HMGN1-214ENST00000482733 TECTAO75443 2155 aa17.42■□□□□ 0.38
HMGN1-214ENST00000482733 A0A1W2PQC6 194 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 STK25O00506 426 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 SLC9A3R1O14745 358 aaPredicted RBP17.41■□□□□ 0.38
HMGN1-214ENST00000482733 TEX33O43247 280 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 PDGFBP01127 241 aaPredicted RBP17.41■□□□□ 0.38
HMGN1-214ENST00000482733 SOX5P35711 763 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 KPNA1P52294 538 aaPredicted RBP17.41■□□□□ 0.38
HMGN1-214ENST00000482733 JAM2P57087 298 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 SNX16P57768 344 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 DAOAP59103 153 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 ZXDBP98169 803 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 RUNX3Q13761 415 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 ITPRIPL2Q3MIP1 535 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 C10orf120Q5SQS8 335 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 BTBD8Q5XKL5 378 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 ASTLQ6HA08 431 aaPredicted RBP17.41■□□□□ 0.38
HMGN1-214ENST00000482733 ZNF852Q6ZMS4 543 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 ZNF677Q86XU0 584 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 FMNL3Q8IVF7 1028 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 TTC16Q8NEE8 873 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 FLCNQ8NFG4 579 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 RIN3Q8TB24 985 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 GOLGA1Q92805 767 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 ZFYVE19Q96K21 471 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 NELL2Q99435 816 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 DDX23Q9BUQ8 820 aaKnown RBP17.41■□□□□ 0.38
HMGN1-214ENST00000482733 SLC4A5Q9BY07 1137 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 PDCL3Q9H2J4 239 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms